RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 EFCAB7A8K855 629 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 BTNL10A8MVZ5 291 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 B4E171 279 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.56□□□□□ -0.4
PTPRF-214ENST00000496043 F5H423 210 aaPredicted RBP12.56□□□□□ -0.4
PTPRF-214ENST00000496043 STMND1H3BQB6 276 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 UGT1A9O60656 530 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 PPFIA2O75334 1257 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 MTX2O75431 263 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 ANXA9O76027 345 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 VIPP01282 170 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 VCLP18206 1134 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 UGT1A6P19224 532 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 IDSP22304 550 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 UGT1A1P22309 533 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 UGT1A4P22310 534 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 CTNNA2P26232 953 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 CSF2RBP32927 897 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 CTNNA1P35221 906 aaKnown RBP12.56□□□□□ -0.4
PTPRF-214ENST00000496043 UGT1A3P35503 534 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 SPAM1P38567 509 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 TSPAN7P41732 249 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 CHRNA4P43681 627 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 MAPK9P45984 424 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 GEMP55040 296 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 RWDD2BP57060 319 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 NOMO1Q15155 1222 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 DCAF12Q5T6F0 453 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 KIAA1614Q5VZ46 1190 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 ITPRIPL1Q6GPH6 555 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 ABRAXAS1Q6UWZ7 409 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 GLT6D1Q7Z4J2 308 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 ARHGAP22Q7Z5H3 698 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 PLXDC1Q8IUK5 500 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 TRIM48Q8IWZ4 208 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 IPMKQ8NFU5 416 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 BLOC1S5Q8TDH9 187 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 ART4Q93070 314 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 SGF29Q96ES7 293 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 TIMM29Q9BSF4 260 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 DDA1Q9BW61 102 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 FSD1LQ9BXM9 530 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 OSBPL8Q9BZF1 889 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 UCK1Q9HA47 277 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 UGT1A7Q9HAW7 530 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 UGT1A10Q9HAW8 530 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 UGT1A8Q9HAW9 530 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 OCIAD1Q9NX40 245 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 TMPRSS11EQ9UL52 423 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 PKP3Q9Y446 797 aa12.56□□□□□ -0.4
PTPRF-214ENST00000496043 LILRA5A6NI73 299 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 PDZK1P1A8MUH7 402 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 STX7O15400 261 aaKnown RBP12.55□□□□□ -0.4
PTPRF-214ENST00000496043 C1QL1O75973 258 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 STK10O94804 968 aaKnown RBP12.55□□□□□ -0.4
PTPRF-214ENST00000496043 AGTP01019 485 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 AMD1P17707 334 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 FECHP22830 423 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 SLC19A1P41440 591 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 ATP1A2P50993 1020 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 RAB15P59190 212 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 UBE2IP63279 158 aaKnown RBP12.55□□□□□ -0.4
PTPRF-214ENST00000496043 MC2RQ01718 297 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 OTUD4Q01804 1114 aaKnown RBP12.55□□□□□ -0.4
PTPRF-214ENST00000496043 PRPSAP1Q14558 356 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 CHRNA6Q15825 494 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 PLA2G4EQ3MJ16 856 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 LDLRAP1Q5SW96 308 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 DARS2Q6PI48 645 aaKnown RBP12.55□□□□□ -0.4
PTPRF-214ENST00000496043 XKR5Q6UX68 686 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 WASH2PQ6VEQ5 465 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 TMEM26Q6ZUK4 368 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 ZNF605Q86T29 641 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 FAM129CQ86XR2 697 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 ZNF547Q8IVP9 402 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 CDKL3Q8IVW4 592 aaPredicted RBP12.55□□□□□ -0.4
PTPRF-214ENST00000496043 ZNF843Q8N446 348 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 ACTL9Q8TC94 416 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 TBC1D10AQ9BXI6 508 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 C10orf88Q9H8K7 445 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 WASH6PQ9NQA3 447 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 SCHIP1Q9P0W5 487 aaPredicted RBP12.55□□□□□ -0.4
PTPRF-214ENST00000496043 DNAJC16Q9Y2G8 782 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 AAR2Q9Y312 384 aaKnown RBP12.55□□□□□ -0.4
PTPRF-214ENST00000496043 B3GALT1Q9Y5Z6 326 aa12.55□□□□□ -0.4
PTPRF-214ENST00000496043 DNMT3AQ9Y6K1 912 aaPredicted RBP12.55□□□□□ -0.4
PTPRF-214ENST00000496043 GLYATL1P3A0A0U1RQE8 302 aa12.54□□□□□ -0.4
PTPRF-214ENST00000496043 C2orf81A6NN90 581 aa12.54□□□□□ -0.4
PTPRF-214ENST00000496043 PJA2O43164 708 aa12.54□□□□□ -0.4
PTPRF-214ENST00000496043 BUD23O43709 281 aaKnown RBP12.54□□□□□ -0.4
PTPRF-214ENST00000496043 POP7O75817 140 aaKnown RBP12.54□□□□□ -0.4
PTPRF-214ENST00000496043 TJP3O95049 919 aa12.54□□□□□ -0.4
PTPRF-214ENST00000496043 RBP3P10745 1247 aa12.54□□□□□ -0.4
PTPRF-214ENST00000496043 PTPN7P35236 360 aa12.54□□□□□ -0.4
PTPRF-214ENST00000496043 EIF3EP60228 445 aaKnown RBP12.54□□□□□ -0.4
PTPRF-214ENST00000496043 ITGA9Q13797 1035 aa12.54□□□□□ -0.4
PTPRF-214ENST00000496043 LY6DQ14210 128 aa12.54□□□□□ -0.4
PTPRF-214ENST00000496043 KHDC1Q4VXA5 237 aaKnown RBP12.54□□□□□ -0.4
PTPRF-214ENST00000496043 ANKRD20A2Q5SQ80 823 aa12.54□□□□□ -0.4
PTPRF-214ENST00000496043 ANKRD20A1Q5TYW2 823 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms