RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	TIMM29	Q9BSF4	260 aa		10.8	□□□□□ -0.68
DCTN1-223	ENST00000495643	TMEM121	Q9BTD3	319 aa		10.8	□□□□□ -0.68
DCTN1-223	ENST00000495643	SEMA6C	Q9H3T2	930 aa		10.8	□□□□□ -0.68
DCTN1-223	ENST00000495643	PRDM8	Q9NQV8	689 aa		10.8	□□□□□ -0.68
DCTN1-223	ENST00000495643	THSD1	Q9NS62	852 aa		10.8	□□□□□ -0.68
DCTN1-223	ENST00000495643	SMOX	Q9NWM0	555 aa		10.8	□□□□□ -0.68
DCTN1-223	ENST00000495643	KCTD3	Q9Y597	815 aa		10.8	□□□□□ -0.68
DCTN1-223	ENST00000495643	LOC400499	M0QZD8	3231 aa		10.8	□□□□□ -0.68
DCTN1-223	ENST00000495643	PTPRQ	Q9UMZ3	2332 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	KIR2DS5	A0A0G2JLQ3	304 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643		A0A0G2JNG1	304 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	IGHV5-10-1	A0A0J9YXX1	117 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	OR5K4	A6NMS3	321 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	C2orf81	A6NN90	581 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	AGAP14	A8MT82	685 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	KIR2DS3	K7RE56	304 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	LIAS	O43766	372 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	SNX2	O60749	519 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	CCDC175	P0C221	793 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	HOXB3	P14651	431 aa	Predicted RBP	10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	SLC2A4	P14672	509 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	XRCC1	P18887	633 aa	Predicted RBP	10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	UBE2I	P63279	158 aa	Known RBP	10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	XIAP	P98170	497 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	HHEX	Q03014	270 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	CCDC173	Q0VFZ6	552 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	BIRC2	Q13490	618 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	ITGA9	Q13797	1035 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	KIR2DS5	Q14953	304 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	RPS6KA1	Q15418	735 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	INSC	Q1MX18	579 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	MAP9	Q49MG5	647 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	LDLRAP1	Q5SW96	308 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	GPRC6A	Q5T6X5	926 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	SEL1L2	Q5TEA6	688 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	LRRC69	Q6ZNQ3	347 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	SLC13A5	Q86YT5	568 aa	Predicted RBP	10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	SPACA3	Q8IXA5	215 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	FBXO39	Q8N4B4	442 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	RASGEF1A	Q8N9B8	481 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	DDHD1	Q8NEL9	900 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	OR4K2	Q8NGD2	314 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	GDAP1	Q8TB36	358 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	ZNF398	Q8TD17	642 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	TMEM159	Q96B96	161 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	LZTFL1	Q9NQ48	299 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	KCNK4	Q9NYG8	393 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	SCHIP1	Q9P0W5	487 aa	Predicted RBP	10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	FEZ2	Q9UHY8	353 aa	Predicted RBP	10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	SSUH2	Q9Y2M2	353 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	MGA	Q8IWI9	3026 aa		10.79	□□□□□ -0.68
DCTN1-223	ENST00000495643	LDB2	O43679	373 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	SRP72	O76094	671 aa	Known RBP	10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	PRAMEF1	O95521	474 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	CRTAM	O95727	393 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	AP2A1	O95782	977 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	HGF	P14210	728 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	BRAF	P15056	766 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	STIP1	P31948	543 aa	Known RBP	10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	CSF2RB	P32927	897 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	ABCG1	P45844	678 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	ZNF140	P52738	457 aa	Predicted RBP	10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	CTSC	P53634	463 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	LIMK2	P53671	638 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	GPLD1	P80108	840 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	PDE1B	Q01064	536 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	TLE3	Q04726	772 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	NFATC2	Q13469	925 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	C16orf72	Q14CZ0	275 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	SIX1	Q15475	284 aa	Predicted RBP	10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	P3H1	Q32P28	736 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	PLA2G4E	Q3MJ16	856 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	PHF19	Q5T6S3	580 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	AGAP9	Q5VTM2	703 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	ABRAXAS1	Q6UWZ7	409 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	WASH2P	Q6VEQ5	465 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	SLC9B2	Q86UD5	537 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	PDZD3	Q86UT5	571 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	ZNF761	Q86XN6	746 aa	Predicted RBP	10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	OR4D9	Q8NGE8	314 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	OR13C4	Q8NGS5	318 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	SH3KBP1	Q96B97	665 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	TTC25	Q96NG3	672 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	SLC38A3	Q99624	504 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	DPYSL5	Q9BPU6	564 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	DPH1	Q9BZG8	443 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	OSGEPL1	Q9H4B0	414 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	LRRC40	Q9H9A6	602 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	WASH6P	Q9NQA3	447 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	ZNF624	Q9P2J8	865 aa	Predicted RBP	10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	PDP2	Q9P2J9	529 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	CPNE7	Q9UBL6	633 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	FKBPL	Q9UIM3	349 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	DNAJC16	Q9Y2G8	782 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	LOXL2	Q9Y4K0	774 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	PCDHGA7	Q9Y5G6	932 aa		10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	10.78	□□□□□ -0.68
DCTN1-223	ENST00000495643	PSMD3	O43242	534 aa		10.77	□□□□□ -0.69
DCTN1-223	ENST00000495643	KCNJ13	O60928	360 aa		10.77	□□□□□ -0.69

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