RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	HSP90B2P	Q58FF3	399 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	UBAP2	Q5T6F2	1119 aa	Known RBP	13.39	□□□□□ -0.27
APTX-231	ENST00000494973	LRRC8E	Q6NSJ5	796 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	GCNT7	Q6ZNI0	430 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	RGL4	Q8IZJ4	473 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	GPATCH11	Q8N954	259 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	PLA2G15	Q8NCC3	412 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	EPS8L3	Q8TE67	593 aa	Known RBP	13.39	□□□□□ -0.27
APTX-231	ENST00000494973	PGM2	Q96G03	612 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	KLHDC7B	Q96G42	594 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	WDR92	Q96MX6	357 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	MCMBP	Q9BTE3	642 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	P2RY12	Q9H244	342 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	TAS2R13	Q9NYV9	303 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	KLHL42	Q9P2K6	505 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	CNOT6	Q9ULM6	557 aa	Known RBP	13.39	□□□□□ -0.27
APTX-231	ENST00000494973	PSAT1	Q9Y617	370 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	13.39	□□□□□ -0.27
APTX-231	ENST00000494973	PLXNB3	Q9ULL4	1909 aa		13.39	□□□□□ -0.27
APTX-231	ENST00000494973	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	FAM86C2P	A6NEL3	165 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	SMIM23	A6NLE4	172 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	LILRB5	O75023	590 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	HAUS5	O94927	633 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	STMN1	P16949	149 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	CD38	P28907	300 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	CRABP2	P29373	138 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	SLCO1A2	P46721	670 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	PRLHR	P49683	370 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	CDKN1C	P49918	316 aa	Predicted RBP	13.38	□□□□□ -0.27
APTX-231	ENST00000494973	BLK	P51451	505 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	AFF3	P51826	1226 aa	Known RBP	13.38	□□□□□ -0.27
APTX-231	ENST00000494973	PLOD1	Q02809	727 aa	Predicted RBP	13.38	□□□□□ -0.27
APTX-231	ENST00000494973	CNST	Q6PJW8	725 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	TIFAB	Q6ZNK6	161 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	LDB1	Q86U70	411 aa	Predicted RBP	13.38	□□□□□ -0.27
APTX-231	ENST00000494973	LCA5	Q86VQ0	697 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	TMEFF1	Q8IYR6	380 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	FRMD1	Q8N878	549 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	OR56A4	Q8NGH8	313 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	OR2W6P	Q8NHA6	318 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	ACMSD	Q8TDX5	336 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	FUBP1	Q96AE4	644 aa	Known RBP	13.38	□□□□□ -0.27
APTX-231	ENST00000494973	MRRF	Q96E11	262 aa	Known RBP	13.38	□□□□□ -0.27
APTX-231	ENST00000494973	ELMO2	Q96JJ3	720 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	AARSD1	Q9BTE6	412 aa	Known RBP	13.38	□□□□□ -0.27
APTX-231	ENST00000494973	FZD3	Q9NPG1	666 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	EURL	Q9NYK6	297 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	SLC17A6	Q9P2U8	582 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	INVS	Q9Y283	1065 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	SLC17A4	Q9Y2C5	497 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	CRYL1	Q9Y2S2	319 aa		13.38	□□□□□ -0.27
APTX-231	ENST00000494973	CEP192	Q8TEP8	1941 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973		A0A1B0GTW7	788 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	EIF3F	O00303	357 aa	Predicted RBP	13.37	□□□□□ -0.27
APTX-231	ENST00000494973	KMO	O15229	486 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	BCAT2	O15382	392 aa	Predicted RBP	13.37	□□□□□ -0.27
APTX-231	ENST00000494973	GPR39	O43194	453 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	NUAK1	O60285	661 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	SLC34A2	O95436	690 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	MT-ND3	P03897	115 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	MPO	P05164	745 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	PRSS56	P0CW18	603 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	THEGL	P0DJG4	465 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	GABRB3	P28472	473 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	GCA	P28676	217 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	FMO4	P31512	558 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	SLC26A3	P40879	764 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	DHPS	P49366	369 aa	Predicted RBP	13.37	□□□□□ -0.27
APTX-231	ENST00000494973	KPNA2	P52292	529 aa	Known RBP	13.37	□□□□□ -0.27
APTX-231	ENST00000494973	LRP8	Q14114	963 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	USP10	Q14694	798 aa	Known RBP	13.37	□□□□□ -0.27
APTX-231	ENST00000494973	PLK5	Q496M5	336 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	HECTD2	Q5U5R9	776 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973		Q6ZSR6	202 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	ADGRG6	Q86SQ4	1221 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	LRRTM4	Q86VH4	590 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	GALNT13	Q8IUC8	556 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	TRAPPC5	Q8IUR0	188 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	SLC41A1	Q8IVJ1	513 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	OXR1	Q8N573	874 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	CEP76	Q8TAP6	659 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	ISL2	Q96A47	359 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	ALKBH8	Q96BT7	664 aa	Known RBP	13.37	□□□□□ -0.27
APTX-231	ENST00000494973	LOXL4	Q96JB6	756 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	LINC00615	Q96LM1	132 aa	Predicted RBP	13.37	□□□□□ -0.27
APTX-231	ENST00000494973	TSNARE1	Q96NA8	513 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	MYOC	Q99972	504 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	ORAI3	Q9BRQ5	295 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	MIR1-1HG	Q9H1L0	117 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	OR2AG1	Q9H205	316 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	SYTL2	Q9HCH5	934 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	MED4	Q9NPJ6	270 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	C11orf16	Q9NQ32	467 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	GPR27	Q9NS67	375 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	SPATS2L	Q9NUQ6	558 aa	Known RBP	13.37	□□□□□ -0.27
APTX-231	ENST00000494973	KL	Q9UEF7	1012 aa		13.37	□□□□□ -0.27
APTX-231	ENST00000494973	EIF2B4	Q9UI10	523 aa	Known RBP	13.37	□□□□□ -0.27
APTX-231	ENST00000494973	TRMT6	Q9UJA5	497 aa	Known RBP	13.37	□□□□□ -0.27
APTX-231	ENST00000494973	TLK1	Q9UKI8	766 aa		13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms