RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 TMEM115Q12893 351 aaPredicted RBP32.75■■■□□ 2.83
CBX4-203ENST00000494546 SPARCL1Q14515 664 aa32.75■■■□□ 2.83
CBX4-203ENST00000494546 ARHGEF18Q6ZSZ5 1173 aa32.75■■■□□ 2.83
CBX4-203ENST00000494546 SLC9B2Q86UD5 537 aa32.75■■■□□ 2.83
CBX4-203ENST00000494546 TRAPPC5Q8IUR0 188 aa32.75■■■□□ 2.83
CBX4-203ENST00000494546 ZNF547Q8IVP9 402 aa32.75■■■□□ 2.83
CBX4-203ENST00000494546 DTX3LQ8TDB6 740 aa32.75■■■□□ 2.83
CBX4-203ENST00000494546 PPP1R2P1Q96PQ5 205 aa32.75■■■□□ 2.83
CBX4-203ENST00000494546 IGHV5-10-1A0A0J9YXX1 117 aa32.74■■■□□ 2.83
CBX4-203ENST00000494546 C5orf60A6NFR6 353 aa32.74■■■□□ 2.83
CBX4-203ENST00000494546 ARHGAP6O43182 974 aa32.74■■■□□ 2.83
CBX4-203ENST00000494546 LPOP22079 712 aaPredicted RBP32.74■■■□□ 2.83
CBX4-203ENST00000494546 CSF2RBP32927 897 aa32.74■■■□□ 2.83
CBX4-203ENST00000494546 GPLD1P80108 840 aa32.74■■■□□ 2.83
CBX4-203ENST00000494546 ITGA9Q13797 1035 aa32.74■■■□□ 2.83
CBX4-203ENST00000494546 C16orf72Q14CZ0 275 aa32.74■■■□□ 2.83
CBX4-203ENST00000494546 TAF1AQ15573 450 aaPredicted RBP32.74■■■□□ 2.83
CBX4-203ENST00000494546 BROXQ5VW32 411 aa32.74■■■□□ 2.83
CBX4-203ENST00000494546 RCBTB1Q8NDN9 531 aa32.74■■■□□ 2.83
CBX4-203ENST00000494546 OR10G6Q8NH81 332 aa32.74■■■□□ 2.83
CBX4-203ENST00000494546 BRSK1Q8TDC3 778 aa32.74■■■□□ 2.83
CBX4-203ENST00000494546 CCDC97Q96F63 343 aaPredicted RBP32.74■■■□□ 2.83
CBX4-203ENST00000494546 CCDC74BQ96LY2 380 aa32.74■■■□□ 2.83
CBX4-203ENST00000494546 TBL1YQ9BQ87 522 aa32.74■■■□□ 2.83
CBX4-203ENST00000494546 TIMM29Q9BSF4 260 aa32.74■■■□□ 2.83
CBX4-203ENST00000494546 AKAP7Q9P0M2 348 aaPredicted RBP32.74■■■□□ 2.83
CBX4-203ENST00000494546 ZFYVE26Q68DK2 2539 aa32.73■■■□□ 2.83
CBX4-203ENST00000494546 KIR2DS5A0A0G2JLQ3 304 aa32.73■■■□□ 2.83
CBX4-203ENST00000494546 A0A0G2JNG1 304 aa32.73■■■□□ 2.83
CBX4-203ENST00000494546 OR5K4A6NMS3 321 aa32.73■■■□□ 2.83
CBX4-203ENST00000494546 C2orf81A6NN90 581 aa32.73■■■□□ 2.83
CBX4-203ENST00000494546 KIR2DS3K7RE56 304 aa32.73■■■□□ 2.83
CBX4-203ENST00000494546 MPSTP25325 297 aa32.73■■■□□ 2.83
CBX4-203ENST00000494546 SLC5A2P31639 672 aa32.73■■■□□ 2.83
CBX4-203ENST00000494546 KIR2DS5Q14953 304 aa32.73■■■□□ 2.83
CBX4-203ENST00000494546 OR4K2Q8NGD2 314 aa32.73■■■□□ 2.83
CBX4-203ENST00000494546 SH3KBP1Q96B97 665 aa32.73■■■□□ 2.83
CBX4-203ENST00000494546 LRRC45Q96CN5 670 aa32.73■■■□□ 2.83
CBX4-203ENST00000494546 DPH1Q9BZG8 443 aa32.73■■■□□ 2.83
CBX4-203ENST00000494546 PRORYQ9H606 182 aa32.73■■■□□ 2.83
CBX4-203ENST00000494546 KCTD3Q9Y597 815 aa32.73■■■□□ 2.83
CBX4-203ENST00000494546 ITPR1Q14643 2758 aa32.73■■■□□ 2.83
CBX4-203ENST00000494546 PDZK1P1A8MUH7 402 aa32.72■■■□□ 2.83
CBX4-203ENST00000494546 GAPDHSO14556 408 aaPredicted RBP32.72■■■□□ 2.83
CBX4-203ENST00000494546 LIMK2P53671 638 aa32.72■■■□□ 2.83
CBX4-203ENST00000494546 MAPK10P53779 464 aa32.72■■■□□ 2.83
CBX4-203ENST00000494546 CFHR1Q03591 330 aa32.72■■■□□ 2.83
CBX4-203ENST00000494546 SQSTM1Q13501 440 aa32.72■■■□□ 2.83
CBX4-203ENST00000494546 SEPT7Q16181 437 aaKnown RBP32.72■■■□□ 2.83
CBX4-203ENST00000494546 LDLRAP1Q5SW96 308 aa32.72■■■□□ 2.83
CBX4-203ENST00000494546 SEL1L2Q5TEA6 688 aa32.72■■■□□ 2.83
CBX4-203ENST00000494546 CCDC112Q8NEF3 446 aa32.72■■■□□ 2.83
CBX4-203ENST00000494546 OR4D9Q8NGE8 314 aa32.72■■■□□ 2.83
CBX4-203ENST00000494546 SLC35B2Q8TB61 432 aa32.72■■■□□ 2.83
CBX4-203ENST00000494546 FCRL3Q96P31 734 aaPredicted RBP32.72■■■□□ 2.83
CBX4-203ENST00000494546 TMEM121Q9BTD3 319 aa32.72■■■□□ 2.83
CBX4-203ENST00000494546 TMEM9Q9P0T7 183 aa32.72■■■□□ 2.83
CBX4-203ENST00000494546 CPNE7Q9UBL6 633 aa32.72■■■□□ 2.83
CBX4-203ENST00000494546 PCDHGA7Q9Y5G6 932 aa32.72■■■□□ 2.83
CBX4-203ENST00000494546 DUX1O43812 170 aa32.71■■■□□ 2.83
CBX4-203ENST00000494546 CA5AP35218 305 aa32.71■■■□□ 2.83
CBX4-203ENST00000494546 ETV5P41161 510 aa32.71■■■□□ 2.83
CBX4-203ENST00000494546 PARP6Q2NL67 630 aa32.71■■■□□ 2.83
CBX4-203ENST00000494546 GPRC6AQ5T6X5 926 aa32.71■■■□□ 2.83
CBX4-203ENST00000494546 DDHD1Q8NEL9 900 aa32.71■■■□□ 2.83
CBX4-203ENST00000494546 ZNF398Q8TD17 642 aa32.71■■■□□ 2.83
CBX4-203ENST00000494546 DPYSL5Q9BPU6 564 aa32.71■■■□□ 2.83
CBX4-203ENST00000494546 ZCCHC2Q9C0B9 1178 aaKnown RBP32.71■■■□□ 2.83
CBX4-203ENST00000494546 SCHIP1Q9P0W5 487 aaPredicted RBP32.71■■■□□ 2.83
CBX4-203ENST00000494546 PRAMEF1O95521 474 aa32.7■■■□□ 2.83
CBX4-203ENST00000494546 MAPK9P45984 424 aa32.7■■■□□ 2.83
CBX4-203ENST00000494546 GDF10P55107 478 aa32.7■■■□□ 2.83
CBX4-203ENST00000494546 CXADRP78310 365 aa32.7■■■□□ 2.83
CBX4-203ENST00000494546 AVL9Q8NBF6 648 aa32.7■■■□□ 2.83
CBX4-203ENST00000494546 ATG4AQ8WYN0 398 aa32.7■■■□□ 2.83
CBX4-203ENST00000494546 LDHAL6BQ9BYZ2 381 aaPredicted RBP32.7■■■□□ 2.83
CBX4-203ENST00000494546 WDR70Q9NW82 654 aa32.7■■■□□ 2.83
CBX4-203ENST00000494546 EIF2AK3Q9NZJ5 1116 aaKnown RBP32.7■■■□□ 2.83
CBX4-203ENST00000494546 FKBPLQ9UIM3 349 aa32.7■■■□□ 2.83
CBX4-203ENST00000494546 HGSO14964 777 aaPredicted RBP32.69■■■□□ 2.82
CBX4-203ENST00000494546 METTL18O95568 372 aa32.69■■■□□ 2.82
CBX4-203ENST00000494546 CRTAMO95727 393 aa32.69■■■□□ 2.82
CBX4-203ENST00000494546 VCLP18206 1134 aa32.69■■■□□ 2.82
CBX4-203ENST00000494546 DENND5AQ6IQ26 1287 aa32.69■■■□□ 2.82
CBX4-203ENST00000494546 TMEM71Q6P5X7 295 aa32.69■■■□□ 2.82
CBX4-203ENST00000494546 C11orf96Q7Z7L8 435 aa32.69■■■□□ 2.82
CBX4-203ENST00000494546 TAB3Q8N5C8 712 aaPredicted RBP32.69■■■□□ 2.82
CBX4-203ENST00000494546 RASGEF1AQ8N9B8 481 aa32.69■■■□□ 2.82
CBX4-203ENST00000494546 THRAP10827 490 aa32.68■■■□□ 2.82
CBX4-203ENST00000494546 IDSP22304 550 aa32.68■■■□□ 2.82
CBX4-203ENST00000494546 RPL10P27635 214 aaKnown RBP32.68■■■□□ 2.82
CBX4-203ENST00000494546 CTSCP53634 463 aa32.68■■■□□ 2.82
CBX4-203ENST00000494546 MSLNQ13421 630 aaPredicted RBP32.68■■■□□ 2.82
CBX4-203ENST00000494546 TRA2AQ13595 282 aaKnown RBP eCLIP32.68■■■□□ 2.82
CBX4-203ENST00000494546 TRIM48Q8IWZ4 208 aa32.68■■■□□ 2.82
CBX4-203ENST00000494546 KLHDC8BQ8IXV7 354 aa32.68■■■□□ 2.82
CBX4-203ENST00000494546 OR13C4Q8NGS5 318 aa32.68■■■□□ 2.82
CBX4-203ENST00000494546 USP7Q93009 1102 aa32.68■■■□□ 2.82
CBX4-203ENST00000494546 SMOXQ9NWM0 555 aa32.68■■■□□ 2.82
CBX4-203ENST00000494546 NBEAQ8NFP9 2946 aa32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms