RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 PPIL6Q8IXY8 311 aa12.61□□□□□ -0.39
CLIP2-209ENST00000493166 RASGEF1AQ8N9B8 481 aa12.61□□□□□ -0.39
CLIP2-209ENST00000493166 GPR156Q8NFN8 814 aa12.61□□□□□ -0.39
CLIP2-209ENST00000493166 OR6C4Q8NGE1 309 aa12.61□□□□□ -0.39
CLIP2-209ENST00000493166 OR13J1Q8NGT2 312 aa12.61□□□□□ -0.39
CLIP2-209ENST00000493166 PEX13Q92968 403 aa12.61□□□□□ -0.39
CLIP2-209ENST00000493166 HDAC10Q969S8 669 aa12.61□□□□□ -0.39
CLIP2-209ENST00000493166 DCUN1D1Q96GG9 259 aa12.61□□□□□ -0.39
CLIP2-209ENST00000493166 ZNF778Q96MU6 729 aa12.61□□□□□ -0.39
CLIP2-209ENST00000493166 COPS8Q99627 209 aa12.61□□□□□ -0.39
CLIP2-209ENST00000493166 TIMM29Q9BSF4 260 aa12.61□□□□□ -0.39
CLIP2-209ENST00000493166 OSGEPL1Q9H4B0 414 aa12.61□□□□□ -0.39
CLIP2-209ENST00000493166 KLC4Q9NSK0 619 aa12.61□□□□□ -0.39
CLIP2-209ENST00000493166 SYBUQ9NX95 663 aa12.61□□□□□ -0.39
CLIP2-209ENST00000493166 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.61□□□□□ -0.39
CLIP2-209ENST00000493166 SLC2A6Q9UGQ3 507 aa12.61□□□□□ -0.39
CLIP2-209ENST00000493166 UNC13CQ8NB66 2214 aa12.61□□□□□ -0.39
CLIP2-209ENST00000493166 FRYQ5TBA9 3013 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 CCDC162PA2VCL2 907 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 OR51F1A6NGY5 319 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 OR2AG2A6NM03 316 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 CFAP99D6REC4 459 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 GOLGA8MH3BSY2 632 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 SNX2O60749 519 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 AVILO75366 819 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 TOP3BO95985 862 aaKnown RBP12.6□□□□□ -0.39
CLIP2-209ENST00000493166 MLNP12872 115 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 ZNF7P17097 686 aaPredicted RBP12.6□□□□□ -0.39
CLIP2-209ENST00000493166 VCLP18206 1134 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 ACRV1P26436 265 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 CDKN1CP49918 316 aaPredicted RBP12.6□□□□□ -0.39
CLIP2-209ENST00000493166 MAZP56270 477 aaKnown RBP12.6□□□□□ -0.39
CLIP2-209ENST00000493166 ACVR1Q04771 509 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 BIRC2Q13490 618 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 DHX34Q14147 1143 aaKnown RBP12.6□□□□□ -0.39
CLIP2-209ENST00000493166 FNBP1LQ5T0N5 605 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 RNASEH2BQ5TBB1 312 aaKnown RBP12.6□□□□□ -0.39
CLIP2-209ENST00000493166 CASC4Q6P4E1 433 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 TMEM220Q6QAJ8 160 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 AFTPHQ6ULP2 937 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 MICALCLQ6ZW33 695 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 DET1Q7L5Y6 550 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 PCGF5Q86SE9 256 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 CAND1Q86VP6 1230 aaKnown RBP12.6□□□□□ -0.39
CLIP2-209ENST00000493166 SERPINA9Q86WD7 417 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 JAMLQ86YT9 394 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 SFTPA2Q8IWL1 248 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 GALNT15Q8N3T1 639 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 NAT8LQ8N9F0 302 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 MCUQ8NE86 351 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 OR6P1Q8NGX9 317 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 MAPK15Q8TD08 544 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 HEXDCQ8WVB3 486 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.6□□□□□ -0.39
CLIP2-209ENST00000493166 ZNF514Q96K75 400 aaPredicted RBP12.6□□□□□ -0.39
CLIP2-209ENST00000493166 SERPINB12Q96P63 405 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 KRT12Q99456 494 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 ABCG4Q9H172 646 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 XAB2Q9HCS7 855 aaKnown RBP12.6□□□□□ -0.39
CLIP2-209ENST00000493166 CHRAC1Q9NRG0 131 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 ZDHHC3Q9NYG2 299 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 SAMD15Q9P1V8 674 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 TBC1D29Q9UFV1 150 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 ANGPTL2Q9UKU9 493 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 DNAJC16Q9Y2G8 782 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 WDFY3Q8IZQ1 3526 aa12.6□□□□□ -0.39
CLIP2-209ENST00000493166 TRBV5-4A0A0C4DH59 114 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 DNALI1O14645 258 aaPredicted RBP12.59□□□□□ -0.39
CLIP2-209ENST00000493166 TTI1O43156 1089 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 GOT2P00505 430 aaKnown RBP12.59□□□□□ -0.39
CLIP2-209ENST00000493166 PRSS56P0CW18 603 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 SLC2A4P14672 509 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 GLB1P16278 677 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 SPINK2P20155 84 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 PBLDP30039 288 aaPredicted RBP12.59□□□□□ -0.39
CLIP2-209ENST00000493166 FOXN2P32314 431 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 CLCNKAP51800 687 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 CTSCP53634 463 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 INSM1Q01101 510 aaPredicted RBP12.59□□□□□ -0.39
CLIP2-209ENST00000493166 C2orf54Q08AI8 447 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 HLTFQ14527 1009 aaKnown RBP eCLIP12.59□□□□□ -0.39
CLIP2-209ENST00000493166 SMAD1Q15797 465 aaKnown RBP12.59□□□□□ -0.39
CLIP2-209ENST00000493166 PERM1Q5SV97 790 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 IZUMO3Q5VZ72 239 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 PIANPQ8IYJ0 282 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 NAGSQ8N159 534 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 SPATA4Q8NEY3 305 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 OR4L1Q8NH43 312 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 PATE1Q8WXA2 126 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 ZNF592Q92610 1267 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 CCDC74AQ96AQ1 378 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 SGF29Q96ES7 293 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 CCDC3Q9BQI4 270 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 TRIM51Q9BSJ1 452 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 SCNM1Q9BWG6 230 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 SYNDIG1Q9H7V2 258 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 MRM3Q9HC36 420 aaKnown RBP12.59□□□□□ -0.39
CLIP2-209ENST00000493166 SLC23A2Q9UGH3 650 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 SOX13Q9UN79 622 aa12.59□□□□□ -0.39
CLIP2-209ENST00000493166 WASF3Q9UPY6 502 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms