RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 TSPAN7P41732 249 aa16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 EIF3EP60228 445 aaKnown RBP16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 TMEM115Q12893 351 aaPredicted RBP16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 C16orf72Q14CZ0 275 aa16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 SLC1A5Q15758 541 aa16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 LONRF2Q1L5Z9 754 aa16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 SIRPB2Q5JXA9 342 aa16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 SNAP47Q5SQN1 464 aa16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 ZNF449Q6P9G9 518 aa16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 PEX26Q7Z412 305 aa16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 IL22RA1Q8N6P7 574 aa16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 BEND7Q8N7W2 519 aaPredicted RBP16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 RCBTB1Q8NDN9 531 aa16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 SNRNP27Q8WVK2 155 aaKnown RBP16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 KIAA1143Q96AT1 154 aaPredicted RBP16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 ALS2CR12Q96Q35 445 aa16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 EFHD1Q9BUP0 239 aa16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 DDA1Q9BW61 102 aa16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 UCK1Q9HA47 277 aa16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 POT1Q9NUX5 634 aa16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 FEZ2Q9UHY8 353 aaPredicted RBP16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 DNAJC16Q9Y2G8 782 aa16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 REXO2Q9Y3B8 237 aaKnown RBP16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 PCDHGA3Q9Y5H0 932 aa16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 DNMT3AQ9Y6K1 912 aaPredicted RBP16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 LILRA5A6NI73 299 aa16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 CHUKO15111 745 aa16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 KRT86O43790 486 aa16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 RBP3P10745 1247 aa16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 THRAP10827 490 aa16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 PYGMP11217 842 aa16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 XRCC1P18887 633 aaPredicted RBP16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 MSH3P20585 1137 aa16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 RBL1P28749 1068 aa16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 AKT1P31749 480 aa16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 CFHR1Q03591 330 aa16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 NOMO1Q15155 1222 aa16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 CEACAM20Q6UY09 585 aa16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 AMZ2Q86W34 360 aa16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 LRRC57Q8N9N7 239 aa16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 ACTL9Q8TC94 416 aa16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 HEXDCQ8WVB3 486 aa16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 ART4Q93070 314 aa16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 SGF29Q96ES7 293 aa16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 DCUN1D1Q96GG9 259 aa16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 ZDHHC12Q96GR4 267 aa16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 GBA3Q9H227 469 aa16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 GOLPH3Q9H4A6 298 aa16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 ARFGAP3Q9NP61 516 aa16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 PRDM8Q9NQV8 689 aa16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 ASXL3Q9C0F0 2248 aa16.33■□□□□ 0.2
PDLIM2-217ENST00000491330 PMS2P1A4D2B8 440 aa16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 EFCAB7A8K855 629 aa16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 CFAP99D6REC4 459 aa16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 CASC3O15234 703 aaKnown RBP16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 CAPN5O15484 640 aaPredicted RBP16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 KCNN4O15554 427 aa16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 PSMD3O43242 534 aa16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 GAS8O95995 478 aa16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 LPOP22079 712 aaPredicted RBP16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 CD68P34810 354 aaPredicted RBP16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 HADHAP40939 763 aa16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 OTUD4Q01804 1114 aaKnown RBP16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 PLA2G4EQ3MJ16 856 aa16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 KDELC1Q6UW63 502 aa16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 WASH2PQ6VEQ5 465 aa16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 ZNF662Q6ZS27 426 aa16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 ARHGEF18Q6ZSZ5 1173 aa16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 ZNF605Q86T29 641 aa16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 SPC24Q8NBT2 197 aa16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 ACRBPQ8NEB7 543 aa16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 EID2BQ96D98 161 aa16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 MRGPRX2Q96LB1 330 aa16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 LACRTQ9GZZ8 138 aa16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 TRIT1Q9H3H1 467 aaKnown RBP16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 IL26Q9NPH9 171 aa16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 WASH6PQ9NQA3 447 aa16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 IL17CQ9P0M4 197 aa16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 ST14Q9Y5Y6 855 aa16.32■□□□□ 0.2
PDLIM2-217ENST00000491330 RCCD1A6NED2 376 aa16.31■□□□□ 0.2
PDLIM2-217ENST00000491330 A8MU76 341 aa16.31■□□□□ 0.2
PDLIM2-217ENST00000491330 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.31■□□□□ 0.2
PDLIM2-217ENST00000491330 TOX3O15405 576 aaPredicted RBP16.31■□□□□ 0.2
PDLIM2-217ENST00000491330 UBXN7O94888 489 aa16.31■□□□□ 0.2
PDLIM2-217ENST00000491330 CCL4P13236 92 aa16.31■□□□□ 0.2
PDLIM2-217ENST00000491330 HOXB3P14651 431 aaPredicted RBP16.31■□□□□ 0.2
PDLIM2-217ENST00000491330 MPSTP25325 297 aa16.31■□□□□ 0.2
PDLIM2-217ENST00000491330 TAF1AQ15573 450 aaPredicted RBP16.31■□□□□ 0.2
PDLIM2-217ENST00000491330 SEPT7Q16181 437 aaKnown RBP16.31■□□□□ 0.2
PDLIM2-217ENST00000491330 ATP13A5Q4VNC0 1218 aa16.31■□□□□ 0.2
PDLIM2-217ENST00000491330 AGAP9Q5VTM2 703 aa16.31■□□□□ 0.2
PDLIM2-217ENST00000491330 ABRAXAS1Q6UWZ7 409 aa16.31■□□□□ 0.2
PDLIM2-217ENST00000491330 FAM151BQ6UXP7 276 aa16.31■□□□□ 0.2
PDLIM2-217ENST00000491330 ZNF574Q6ZN55 896 aaPredicted RBP16.31■□□□□ 0.2
PDLIM2-217ENST00000491330 TMEM26Q6ZUK4 368 aa16.31■□□□□ 0.2
PDLIM2-217ENST00000491330 ZFAND4Q86XD8 727 aa16.31■□□□□ 0.2
PDLIM2-217ENST00000491330 ZNF761Q86XN6 746 aaPredicted RBP16.31■□□□□ 0.2
PDLIM2-217ENST00000491330 ZNF398Q8TD17 642 aa16.31■□□□□ 0.2
PDLIM2-217ENST00000491330 KRT35Q92764 455 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms