RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 GLYATL1Q969I3 302 aa11.58□□□□□ -0.56
ACTN4-206ENST00000489451 C9orf72Q96LT7 481 aa11.58□□□□□ -0.56
ACTN4-206ENST00000489451 AGAP3Q96P47 875 aa11.58□□□□□ -0.56
ACTN4-206ENST00000489451 PSMG3-AS1Q96PY0 264 aa11.58□□□□□ -0.56
ACTN4-206ENST00000489451 SPATA16Q9BXB7 569 aa11.58□□□□□ -0.56
ACTN4-206ENST00000489451 ZMYND15Q9H091 742 aa11.58□□□□□ -0.56
ACTN4-206ENST00000489451 GPN2Q9H9Y4 310 aaPredicted RBP11.58□□□□□ -0.56
ACTN4-206ENST00000489451 UCK1Q9HA47 277 aa11.58□□□□□ -0.56
ACTN4-206ENST00000489451 ZFYVE1Q9HBF4 777 aa11.58□□□□□ -0.56
ACTN4-206ENST00000489451 MAGEE1Q9HCI5 957 aa11.58□□□□□ -0.56
ACTN4-206ENST00000489451 LRRC4CQ9HCJ2 640 aa11.58□□□□□ -0.56
ACTN4-206ENST00000489451 TRIM39Q9HCM9 518 aa11.58□□□□□ -0.56
ACTN4-206ENST00000489451 TUBD1Q9UJT1 453 aa11.58□□□□□ -0.56
ACTN4-206ENST00000489451 WDR37Q9Y2I8 494 aa11.58□□□□□ -0.56
ACTN4-206ENST00000489451 HEY1Q9Y5J3 304 aa11.58□□□□□ -0.56
ACTN4-206ENST00000489451 LRRD1A4D1F6 860 aa11.57□□□□□ -0.56
ACTN4-206ENST00000489451 OR52A4PA6NMU1 304 aa11.57□□□□□ -0.56
ACTN4-206ENST00000489451 ZNF487B1APH4 448 aa11.57□□□□□ -0.56
ACTN4-206ENST00000489451 K7EM74 188 aa11.57□□□□□ -0.56
ACTN4-206ENST00000489451 GPR39O43194 453 aa11.57□□□□□ -0.56
ACTN4-206ENST00000489451 KIF1CO43896 1103 aaKnown RBP11.57□□□□□ -0.56
ACTN4-206ENST00000489451 SLC25A14O95258 325 aaPredicted RBP11.57□□□□□ -0.56
ACTN4-206ENST00000489451 H2AFZP0C0S5 128 aa11.57□□□□□ -0.56
ACTN4-206ENST00000489451 TMEM253P0C7T8 217 aa11.57□□□□□ -0.56
ACTN4-206ENST00000489451 TYRP1P17643 537 aa11.57□□□□□ -0.56
ACTN4-206ENST00000489451 XRCC1P18887 633 aaPredicted RBP11.57□□□□□ -0.56
ACTN4-206ENST00000489451 MAP4P27816 1152 aaKnown RBP11.57□□□□□ -0.56
ACTN4-206ENST00000489451 CD68P34810 354 aaPredicted RBP11.57□□□□□ -0.56
ACTN4-206ENST00000489451 ABHD18Q0P651 414 aa11.57□□□□□ -0.56
ACTN4-206ENST00000489451 MESDQ14696 234 aa11.57□□□□□ -0.56
ACTN4-206ENST00000489451 SEPT7Q16181 437 aaKnown RBP11.57□□□□□ -0.56
ACTN4-206ENST00000489451 PCSK7Q16549 785 aa11.57□□□□□ -0.56
ACTN4-206ENST00000489451 H2AFVQ71UI9 128 aa11.57□□□□□ -0.56
ACTN4-206ENST00000489451 PHYKPLQ8IUZ5 450 aa11.57□□□□□ -0.56
ACTN4-206ENST00000489451 VSTM4Q8IW00 320 aa11.57□□□□□ -0.56
ACTN4-206ENST00000489451 MAP7D3Q8IWC1 876 aa11.57□□□□□ -0.56
ACTN4-206ENST00000489451 CCHCR1Q8TD31 782 aa11.57□□□□□ -0.56
ACTN4-206ENST00000489451 SH3KBP1Q96B97 665 aa11.57□□□□□ -0.56
ACTN4-206ENST00000489451 PHF12Q96QT6 1004 aa11.57□□□□□ -0.56
ACTN4-206ENST00000489451 DNAJC7Q99615 494 aa11.57□□□□□ -0.56
ACTN4-206ENST00000489451 ZSCAN5AQ9BUG6 496 aa11.57□□□□□ -0.56
ACTN4-206ENST00000489451 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.57□□□□□ -0.56
ACTN4-206ENST00000489451 SLC25A51Q9H1U9 297 aa11.57□□□□□ -0.56
ACTN4-206ENST00000489451 OSGEPL1Q9H4B0 414 aa11.57□□□□□ -0.56
ACTN4-206ENST00000489451 LCMT1Q9UIC8 334 aa11.57□□□□□ -0.56
ACTN4-206ENST00000489451 DNAJC16Q9Y2G8 782 aa11.57□□□□□ -0.56
ACTN4-206ENST00000489451 UTP20O75691 2785 aaKnown RBP11.57□□□□□ -0.56
ACTN4-206ENST00000489451 OR5K4A6NMS3 321 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 GPR89AB7ZAQ6 455 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 GAPDHSO14556 408 aaPredicted RBP11.56□□□□□ -0.56
ACTN4-206ENST00000489451 POLR1CO15160 346 aaPredicted RBP11.56□□□□□ -0.56
ACTN4-206ENST00000489451 AKR1B10O60218 316 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 MTA2O94776 668 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 UBXN7O94888 489 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 TIAF1O95411 115 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 GPR89BP0CG08 455 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 ZNF7P17097 686 aaPredicted RBP11.56□□□□□ -0.56
ACTN4-206ENST00000489451 NR1D1P20393 614 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 PTPN3P26045 913 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 PPM1FP49593 454 aaPredicted RBP11.56□□□□□ -0.56
ACTN4-206ENST00000489451 CDK18Q07002 472 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 ADCY2Q08462 1091 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 AP1B1Q10567 949 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 MAP7Q14244 749 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 PRKD1Q15139 912 aaPredicted RBP11.56□□□□□ -0.56
ACTN4-206ENST00000489451 SLC14A2Q15849 920 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 ATP13A5Q4VNC0 1218 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 ABRAXAS1Q6UWZ7 409 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 NT5DC3Q86UY8 548 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 VSIG1Q86XK7 387 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 CNGA4Q8IV77 575 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 TTC30BQ8N4P2 665 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 FAM26EQ8N5C1 309 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 GPR150Q8NGU9 434 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 SLC35G2Q8TBE7 412 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 CTNNBL1Q8WYA6 563 aaPredicted RBP11.56□□□□□ -0.56
ACTN4-206ENST00000489451 CCDC42Q96M95 316 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 CATSPER2Q96P56 530 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 TGM7Q96PF1 710 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 CHP1Q99653 195 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 ZPBPQ9BS86 351 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 TIMM29Q9BSF4 260 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 ANP32EQ9BTT0 268 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 ADGRE3Q9BY15 652 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 TRIM5Q9C035 493 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 EPB41L1Q9H4G0 881 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 ZNF768Q9H5H4 540 aaKnown RBP11.56□□□□□ -0.56
ACTN4-206ENST00000489451 STN1Q9H668 368 aaKnown RBP11.56□□□□□ -0.56
ACTN4-206ENST00000489451 GLOD4Q9HC38 313 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 ZNF71Q9NQZ8 489 aaPredicted RBP11.56□□□□□ -0.56
ACTN4-206ENST00000489451 UBP1Q9NZI7 540 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 SAE1Q9UBE0 346 aaPredicted RBP11.56□□□□□ -0.56
ACTN4-206ENST00000489451 HYOU1Q9Y4L1 999 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 RPS6KL1Q9Y6S9 549 aa11.56□□□□□ -0.56
ACTN4-206ENST00000489451 USP9YO00507 2555 aaPredicted RBP11.56□□□□□ -0.56
ACTN4-206ENST00000489451 SSU72P8A0A1W2PR75 194 aa11.55□□□□□ -0.56
ACTN4-206ENST00000489451 CLEC18AA5D8T8 446 aa11.55□□□□□ -0.56
ACTN4-206ENST00000489451 GOLGA6L3A6NEY3 463 aa11.55□□□□□ -0.56
ACTN4-206ENST00000489451 APOL1O14791 398 aa11.55□□□□□ -0.56
ACTN4-206ENST00000489451 KMOO15229 486 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms