RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 CSF2RBP32927 897 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 CA5AP35218 305 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 LIMK2P53671 638 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 HHEXQ03014 270 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 MSLNQ13421 630 aaPredicted RBP11.29□□□□□ -0.6
SPEN-205ENST00000487496 NFATC2Q13469 925 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 KIR2DS5Q14953 304 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 TAF1AQ15573 450 aaPredicted RBP11.29□□□□□ -0.6
SPEN-205ENST00000487496 INSCQ1MX18 579 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 PLA2G4EQ3MJ16 856 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 SLC9B2Q86UD5 537 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 RCBTB1Q8NDN9 531 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 OR4D9Q8NGE8 314 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 GDAP1Q8TB36 358 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 BRSK1Q8TDC3 778 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 SH3KBP1Q96B97 665 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 CCDC97Q96F63 343 aaPredicted RBP11.29□□□□□ -0.6
SPEN-205ENST00000487496 FCRL3Q96P31 734 aaPredicted RBP11.29□□□□□ -0.6
SPEN-205ENST00000487496 PPP1R2P1Q96PQ5 205 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 TIMM29Q9BSF4 260 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 TSGA10Q9BZW7 698 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 OSGEPL1Q9H4B0 414 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 STN1Q9H668 368 aaKnown RBP11.29□□□□□ -0.6
SPEN-205ENST00000487496 SCHIP1Q9P0W5 487 aaPredicted RBP11.29□□□□□ -0.6
SPEN-205ENST00000487496 GUCA1BQ9UMX6 200 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 R3HDM2Q9Y2K5 976 aaKnown RBP11.29□□□□□ -0.6
SPEN-205ENST00000487496 SSUH2Q9Y2M2 353 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 ARL5AQ9Y689 179 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 PTPRQQ9UMZ3 2332 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 C2orf81A6NN90 581 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 GAPDHSO14556 408 aaPredicted RBP11.28□□□□□ -0.6
SPEN-205ENST00000487496 HGSO14964 777 aaPredicted RBP11.28□□□□□ -0.6
SPEN-205ENST00000487496 NVLO15381 856 aaKnown RBP11.28□□□□□ -0.6
SPEN-205ENST00000487496 GPR39O43194 453 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 KRT86O43790 486 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 LPOP22079 712 aaPredicted RBP11.28□□□□□ -0.6
SPEN-205ENST00000487496 MPSTP25325 297 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 ETV5P41161 510 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 TRA2AQ13595 282 aaKnown RBP eCLIP11.28□□□□□ -0.6
SPEN-205ENST00000487496 ITGA9Q13797 1035 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 GTF2H3Q13889 308 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 SPARCL1Q14515 664 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 LDLRAP1Q5SW96 308 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 GPRC6AQ5T6X5 926 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 BROXQ5VW32 411 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 DENND5AQ6IQ26 1287 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 TMEM71Q6P5X7 295 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 C11orf96Q7Z7L8 435 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 JAMLQ86YT9 394 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 KLHDC8BQ8IXV7 354 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 FAM71DQ8N9W8 422 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 OR4K2Q8NGD2 314 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 OR10G6Q8NH81 332 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 SLC35B2Q8TB61 432 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 ZNF398Q8TD17 642 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 AHCYL2Q96HN2 611 aaKnown RBP11.28□□□□□ -0.6
SPEN-205ENST00000487496 CCDC74BQ96LY2 380 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 TTC25Q96NG3 672 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 DPYSL5Q9BPU6 564 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.28□□□□□ -0.6
SPEN-205ENST00000487496 AKAP7Q9P0M2 348 aaPredicted RBP11.28□□□□□ -0.6
SPEN-205ENST00000487496 TMEM9Q9P0T7 183 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 CPNE7Q9UBL6 633 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 DNAJC16Q9Y2G8 782 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 KCTD3Q9Y597 815 aa11.28□□□□□ -0.6
SPEN-205ENST00000487496 ZFC3H1O60293 1989 aaKnown RBP11.27□□□□□ -0.61
SPEN-205ENST00000487496 SCN8AQ9UQD0 1980 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 ITPR1Q14643 2758 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 PRAMEF33A0A0G2JMD5 474 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 ARHGAP6O43182 974 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 DUX1O43812 170 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 PRAMEF10O60809 474 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 PRAMEF1O95521 474 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 METTL18O95568 372 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 THRAP10827 490 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 CCL4P13236 92 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 BRAFP15056 766 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 XRCC1P18887 633 aaPredicted RBP11.27□□□□□ -0.61
SPEN-205ENST00000487496 IDSP22304 550 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 CTSCP53634 463 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 MAPK10P53779 464 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 EPHA4P54764 986 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 UCNP55089 124 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 GDF10P55107 478 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 TMPRSS3P57727 454 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 UBE2IP63279 158 aaKnown RBP11.27□□□□□ -0.61
SPEN-205ENST00000487496 CXADRP78310 365 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 CLN3Q13286 438 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 SEPT7Q16181 437 aaKnown RBP11.27□□□□□ -0.61
SPEN-205ENST00000487496 PARP6Q2NL67 630 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 SOWAHCQ53LP3 525 aaPredicted RBP11.27□□□□□ -0.61
SPEN-205ENST00000487496 KCTD11Q693B1 232 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 ABRAXAS1Q6UWZ7 409 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 ARHGEF18Q6ZSZ5 1173 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 GPR155Q7Z3F1 870 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 TRAPPC5Q8IUR0 188 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 RASGEF1AQ8N9B8 481 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 AVL9Q8NBF6 648 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 CCDC112Q8NEF3 446 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 DDHD1Q8NEL9 900 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms