RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 CELA2BP08218 269 aaPredicted RBP14.44□□□□□ -0.1
LIMS3-205ENST00000487150 PNLIPP16233 465 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 GLB1P16278 677 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 ZNF7P17097 686 aaPredicted RBP14.44□□□□□ -0.1
LIMS3-205ENST00000487150 MGAT1P26572 445 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 NSG1P42857 185 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 PTGIRP43119 386 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 PTPRCAPQ14761 206 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 KIR2DS5Q14953 304 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 FASTKD1Q53R41 847 aaKnown RBP14.44□□□□□ -0.1
LIMS3-205ENST00000487150 RNF187Q5TA31 235 aaPredicted RBP14.44□□□□□ -0.1
LIMS3-205ENST00000487150 N4BP2L1Q5TBK1 243 aaPredicted RBP14.44□□□□□ -0.1
LIMS3-205ENST00000487150 IZUMO3Q5VZ72 239 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 KCTD16Q68DU8 428 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 MRNIPQ6NTE8 343 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 ZNF449Q6P9G9 518 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 PACS1Q6VY07 963 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 ZNF534Q76KX8 674 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 AMZ2Q86W34 360 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 CCNJLQ8IV13 435 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 PDIK1LQ8N165 341 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 KYQ8NBH2 561 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 GPR156Q8NFN8 814 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 OR13J1Q8NGT2 312 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 OR6P1Q8NGX9 317 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 OR4L1Q8NH43 312 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 ZNF592Q92610 1267 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 HDAC10Q969S8 669 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 KRT12Q99456 494 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 TSSK1BQ9BXA7 367 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 RAB17Q9H0T7 212 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 SIRPGQ9P1W8 387 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 GULP1Q9UBP9 304 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 VPS9D1Q9Y2B5 631 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 UTP11Q9Y3A2 253 aaKnown RBP14.44□□□□□ -0.1
LIMS3-205ENST00000487150 ADAMTS9Q9P2N4 1935 aa14.44□□□□□ -0.1
LIMS3-205ENST00000487150 DCHS1Q96JQ0 3298 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 LRRK1Q38SD2 2015 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 IGLV3-16A0A075B6K0 115 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 FAM237BA0A1B0GVD1 139 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 EFCAB8A8MWE9 144 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 TTC4O95801 387 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 FUCA1P04066 466 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 ATP1B2P14415 290 aaPredicted RBP14.43□□□□□ -0.1
LIMS3-205ENST00000487150 HALP42357 657 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 MAGEA3P43357 314 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 TTPAP49638 278 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 PRLHRP49683 370 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 DMPKQ09013 629 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 CALCOCO2Q13137 446 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 TCEA2Q15560 299 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 ANKRD22Q5VYY1 191 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 KIAA0930Q6ICG6 404 aaPredicted RBP14.43□□□□□ -0.1
LIMS3-205ENST00000487150 EFL1Q7Z2Z2 1120 aaKnown RBP14.43□□□□□ -0.1
LIMS3-205ENST00000487150 SERPINA9Q86WD7 417 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 TMPRSS12Q86WS5 348 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 NRROSQ86YC3 692 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 BEND7Q8N7W2 519 aaPredicted RBP14.43□□□□□ -0.1
LIMS3-205ENST00000487150 IFI44Q8TCB0 444 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 MAPK15Q8TD08 544 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 SH3KBP1Q96B97 665 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 LRRC39Q96DD0 335 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 LINC00615Q96LM1 132 aaPredicted RBP14.43□□□□□ -0.1
LIMS3-205ENST00000487150 ABCG4Q9H172 646 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 OSGEPL1Q9H4B0 414 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 ARFGAP3Q9NP61 516 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 TREX1Q9NSU2 369 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 CATSPERZQ9NTU4 200 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 SYBUQ9NX95 663 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 TOR4AQ9NXH8 423 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 TMPRSS11EQ9UL52 423 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 KCNK6Q9Y257 313 aa14.43□□□□□ -0.1
LIMS3-205ENST00000487150 TCRBV7S3A2A0A539 114 aa14.42□□□□□ -0.1
LIMS3-205ENST00000487150 CCDC162PA2VCL2 907 aa14.42□□□□□ -0.1
LIMS3-205ENST00000487150 CPED1A4D0V7 1026 aa14.42□□□□□ -0.1
LIMS3-205ENST00000487150 RHPN2P1A8MT19 583 aa14.42□□□□□ -0.1
LIMS3-205ENST00000487150 TTI1O43156 1089 aa14.42□□□□□ -0.1
LIMS3-205ENST00000487150 GPR39O43194 453 aa14.42□□□□□ -0.1
LIMS3-205ENST00000487150 NOBOXO60393 691 aa14.42□□□□□ -0.1
LIMS3-205ENST00000487150 TCEA3O75764 348 aa14.42□□□□□ -0.1
LIMS3-205ENST00000487150 SEC31AO94979 1220 aaKnown RBP14.42□□□□□ -0.1
LIMS3-205ENST00000487150 GOT2P00505 430 aaKnown RBP14.42□□□□□ -0.1
LIMS3-205ENST00000487150 FTH1P02794 183 aa14.42□□□□□ -0.1
LIMS3-205ENST00000487150 F3P13726 295 aa14.42□□□□□ -0.1
LIMS3-205ENST00000487150 IDSP22304 550 aa14.42□□□□□ -0.1
LIMS3-205ENST00000487150 AK4P27144 223 aaPredicted RBP14.42□□□□□ -0.1
LIMS3-205ENST00000487150 PMLP29590 882 aa14.42□□□□□ -0.1
LIMS3-205ENST00000487150 FOXN2P32314 431 aa14.42□□□□□ -0.1
LIMS3-205ENST00000487150 ARSDP51689 593 aa14.42□□□□□ -0.1
LIMS3-205ENST00000487150 SHC2P98077 582 aa14.42□□□□□ -0.1
LIMS3-205ENST00000487150 DNAJC3Q13217 504 aa14.42□□□□□ -0.1
LIMS3-205ENST00000487150 HLTFQ14527 1009 aaKnown RBP eCLIP14.42□□□□□ -0.1
LIMS3-205ENST00000487150 CLPPQ16740 277 aaPredicted RBP14.42□□□□□ -0.1
LIMS3-205ENST00000487150 KHDC1Q4VXA5 237 aaKnown RBP14.42□□□□□ -0.1
LIMS3-205ENST00000487150 CCDC157Q569K6 752 aa14.42□□□□□ -0.1
LIMS3-205ENST00000487150 AGAP9Q5VTM2 703 aa14.42□□□□□ -0.1
LIMS3-205ENST00000487150 GUSBP11Q6P575 273 aa14.42□□□□□ -0.1
LIMS3-205ENST00000487150 WASH2PQ6VEQ5 465 aa14.42□□□□□ -0.1
LIMS3-205ENST00000487150 RAB44Q7Z6P3 723 aaPredicted RBP14.42□□□□□ -0.1
LIMS3-205ENST00000487150 SDCCAG8Q86SQ7 713 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms