RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 CETN2P41208 172 aa18.82■□□□□ 0.6
CLIP2-206ENST00000487091 VAV2P52735 878 aa18.82■□□□□ 0.6
CLIP2-206ENST00000487091 UBE2IP63279 158 aaKnown RBP18.82■□□□□ 0.6
CLIP2-206ENST00000487091 OTUD4Q01804 1114 aaKnown RBP18.82■□□□□ 0.6
CLIP2-206ENST00000487091 TMEM115Q12893 351 aaPredicted RBP18.82■□□□□ 0.6
CLIP2-206ENST00000487091 NFATC2Q13469 925 aa18.82■□□□□ 0.6
CLIP2-206ENST00000487091 TGIF1Q15583 401 aa18.82■□□□□ 0.6
CLIP2-206ENST00000487091 INSCQ1MX18 579 aa18.82■□□□□ 0.6
CLIP2-206ENST00000487091 ITPRIPL1Q6GPH6 555 aa18.82■□□□□ 0.6
CLIP2-206ENST00000487091 CRTC3Q6UUV7 619 aa18.82■□□□□ 0.6
CLIP2-206ENST00000487091 GLT6D1Q7Z4J2 308 aa18.82■□□□□ 0.6
CLIP2-206ENST00000487091 DTX1Q86Y01 620 aa18.82■□□□□ 0.6
CLIP2-206ENST00000487091 ZNF547Q8IVP9 402 aa18.82■□□□□ 0.6
CLIP2-206ENST00000487091 LRRC57Q8N9N7 239 aa18.82■□□□□ 0.6
CLIP2-206ENST00000487091 CCDC112Q8NEF3 446 aa18.82■□□□□ 0.6
CLIP2-206ENST00000487091 FSD1LQ9BXM9 530 aa18.82■□□□□ 0.6
CLIP2-206ENST00000487091 GBA3Q9H227 469 aa18.82■□□□□ 0.6
CLIP2-206ENST00000487091 OSGEPL1Q9H4B0 414 aa18.82■□□□□ 0.6
CLIP2-206ENST00000487091 UCK1Q9HA47 277 aa18.82■□□□□ 0.6
CLIP2-206ENST00000487091 TMEM9Q9P0T7 183 aa18.82■□□□□ 0.6
CLIP2-206ENST00000487091 BAHCC1Q9P281 2608 aa18.82■□□□□ 0.6
CLIP2-206ENST00000487091 ATMQ13315 3056 aa18.82■□□□□ 0.6
CLIP2-206ENST00000487091 PRR19A6NJB7 356 aa18.81■□□□□ 0.6
CLIP2-206ENST00000487091 F5H423 210 aaPredicted RBP18.81■□□□□ 0.6
CLIP2-206ENST00000487091 MTX2O75431 263 aa18.81■□□□□ 0.6
CLIP2-206ENST00000487091 MPSTP25325 297 aa18.81■□□□□ 0.6
CLIP2-206ENST00000487091 C19orf57Q0VDD7 668 aa18.81■□□□□ 0.6
CLIP2-206ENST00000487091 KHDC1Q4VXA5 237 aaKnown RBP18.81■□□□□ 0.6
CLIP2-206ENST00000487091 TAF1BQ53T94 588 aaPredicted RBP18.81■□□□□ 0.6
CLIP2-206ENST00000487091 WASH2PQ6VEQ5 465 aa18.81■□□□□ 0.6
CLIP2-206ENST00000487091 ZFAND4Q86XD8 727 aa18.81■□□□□ 0.6
CLIP2-206ENST00000487091 GAS2L3Q86XJ1 694 aa18.81■□□□□ 0.6
CLIP2-206ENST00000487091 CDKL3Q8IVW4 592 aaPredicted RBP18.81■□□□□ 0.6
CLIP2-206ENST00000487091 BLOC1S5Q8TDH9 187 aa18.81■□□□□ 0.6
CLIP2-206ENST00000487091 TTC9Q92623 222 aa18.81■□□□□ 0.6
CLIP2-206ENST00000487091 BAG1Q99933 345 aaPredicted RBP18.81■□□□□ 0.6
CLIP2-206ENST00000487091 C10orf88Q9H8K7 445 aa18.81■□□□□ 0.6
CLIP2-206ENST00000487091 WASH6PQ9NQA3 447 aa18.81■□□□□ 0.6
CLIP2-206ENST00000487091 PKP3Q9Y446 797 aa18.81■□□□□ 0.6
CLIP2-206ENST00000487091 PCDHB11Q9Y5F2 797 aa18.81■□□□□ 0.6
CLIP2-206ENST00000487091 GRID2IPA4D2P6 1211 aa18.8■□□□□ 0.6
CLIP2-206ENST00000487091 LILRA5A6NI73 299 aa18.8■□□□□ 0.6
CLIP2-206ENST00000487091 B4E171 279 aa18.8■□□□□ 0.6
CLIP2-206ENST00000487091 KCNJ13O60928 360 aa18.8■□□□□ 0.6
CLIP2-206ENST00000487091 ZNF189O75820 626 aaPredicted RBP18.8■□□□□ 0.6
CLIP2-206ENST00000487091 TJP3O95049 919 aa18.8■□□□□ 0.6
CLIP2-206ENST00000487091 RBP3P10745 1247 aa18.8■□□□□ 0.6
CLIP2-206ENST00000487091 TSPAN7P41732 249 aa18.8■□□□□ 0.6
CLIP2-206ENST00000487091 PPM1FP49593 454 aaPredicted RBP18.8■□□□□ 0.6
CLIP2-206ENST00000487091 EIF3EP60228 445 aaKnown RBP18.8■□□□□ 0.6
CLIP2-206ENST00000487091 GTF2H3Q13889 308 aa18.8■□□□□ 0.6
CLIP2-206ENST00000487091 CHRNA6Q15825 494 aa18.8■□□□□ 0.6
CLIP2-206ENST00000487091 ABRAXAS1Q6UWZ7 409 aa18.8■□□□□ 0.6
CLIP2-206ENST00000487091 RANBP10Q6VN20 620 aa18.8■□□□□ 0.6
CLIP2-206ENST00000487091 ARHGAP22Q7Z5H3 698 aa18.8■□□□□ 0.6
CLIP2-206ENST00000487091 KIAA1328Q86T90 577 aa18.8■□□□□ 0.6
CLIP2-206ENST00000487091 ACRBPQ8NEB7 543 aa18.8■□□□□ 0.6
CLIP2-206ENST00000487091 GDAP1Q8TB36 358 aa18.8■□□□□ 0.6
CLIP2-206ENST00000487091 NCSTNQ92542 709 aa18.8■□□□□ 0.6
CLIP2-206ENST00000487091 ALG3Q92685 438 aa18.8■□□□□ 0.6
CLIP2-206ENST00000487091 TTC25Q96NG3 672 aa18.8■□□□□ 0.6
CLIP2-206ENST00000487091 DDA1Q9BW61 102 aa18.8■□□□□ 0.6
CLIP2-206ENST00000487091 ZCCHC2Q9C0B9 1178 aaKnown RBP18.8■□□□□ 0.6
CLIP2-206ENST00000487091 ZMYND15Q9H091 742 aa18.8■□□□□ 0.6
CLIP2-206ENST00000487091 AAR2Q9Y312 384 aaKnown RBP18.8■□□□□ 0.6
CLIP2-206ENST00000487091 KALRNO60229 2985 aa18.8■□□□□ 0.6
CLIP2-206ENST00000487091 SDK2Q58EX2 2172 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 GLYATL1P3A0A0U1RQE8 302 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 STMND1H3BQB6 276 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 STK10O94804 968 aaKnown RBP18.79■□□□□ 0.6
CLIP2-206ENST00000487091 AGTP01019 485 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 PRB1P04280 392 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 PYGMP11217 842 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 VCLP18206 1134 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 IDSP22304 550 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 SLC19A1P41440 591 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 ITGA9Q13797 1035 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 PLA2G4EQ3MJ16 856 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 ANKRD20A2Q5SQ80 823 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 MANEAQ5SRI9 462 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 LDLRAP1Q5SW96 308 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 ANKRD20A1Q5TYW2 823 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 AGAP9Q5VTM2 703 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 ANKRD20A3Q5VUR7 823 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 TMEM26Q6ZUK4 368 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 C11orf96Q7Z7L8 435 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 TRAPPC5Q8IUR0 188 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 TXLNBQ8N3L3 684 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 ART4Q93070 314 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 PPP1R2P1Q96PQ5 205 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 GORASP1Q9BQQ3 440 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 FICDQ9BVA6 458 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 ASPSCR1Q9BZE9 553 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 WDR70Q9NW82 654 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 SLC39A1Q9NY26 324 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 SCHIP1Q9P0W5 487 aaPredicted RBP18.79■□□□□ 0.6
CLIP2-206ENST00000487091 ZNF624Q9P2J8 865 aaPredicted RBP18.79■□□□□ 0.6
CLIP2-206ENST00000487091 AMFRQ9UKV5 643 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 DNAJC16Q9Y2G8 782 aa18.79■□□□□ 0.6
CLIP2-206ENST00000487091 MACROD2A1Z1Q3 448 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms