RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 YPEL5P62699 121 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 RAD51Q06609 339 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 DMTNQ08495 405 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 PPIDQ08752 370 aaKnown RBP9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 GALNT2Q10471 571 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 PTK2BQ14289 1009 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 NFATC4Q14934 902 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 PARP15Q460N3 678 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 ANKRD20A2Q5SQ80 823 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 ANKRD20A1Q5TYW2 823 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 ANKRD20A3Q5VUR7 823 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 ARMC3Q5W041 872 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 AFMIDQ63HM1 303 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 ITPRIPL1Q6GPH6 555 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 RBM44Q6ZP01 1051 aaKnown RBP9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 RFLNAQ6ZTI6 216 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 CYS1Q717R9 158 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 SRLQ86TD4 932 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 PRUNE1Q86TP1 453 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 PALM2Q8IXS6 379 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 PGBD5Q8N414 524 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 Q8N9G6 341 aaPredicted RBP9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 LRRN4Q8WUT4 740 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 BTN2A2Q8WVV5 523 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 KCNE4Q8WWG9 221 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 FATE1Q969F0 183 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 C9orf72Q96LT7 481 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 TSGA13Q96PP4 275 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 NAT9Q9BTE0 207 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 TMEM168Q9H0V1 697 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 SUDS3Q9H7L9 328 aaPredicted RBP9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 LRRC4CQ9HCJ2 640 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 PTPRQQ9UMZ3 2332 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 GPR34Q9UPC5 381 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 ST14Q9Y5Y6 855 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 SPTA1P02549 2419 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 EXOC1LA0A1B0GW35 172 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 TRAFD1O14545 582 aaPredicted RBP9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 TMEM63AO94886 807 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 CTSEP14091 401 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 PLA2G2AP14555 144 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 ITIH1P19827 911 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 CCNCP24863 283 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 STX2P32856 288 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 ETV5P41161 510 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 SCNN1BP51168 640 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 SLC18A1P54219 525 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 ERVPABLB-1P60509 514 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 GNGT1P63211 74 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 SLC10A7Q0GE19 358 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 C19orf57Q0VDD7 668 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 CLN3Q13286 438 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 ANKRD22Q5VYY1 191 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 ZNF449Q6P9G9 518 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 LIPIQ6XZB0 460 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 ZNF771Q7L3S4 317 aaPredicted RBP9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 LAPTM4BQ86VI4 370 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 CCNYQ8ND76 341 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 EPS8L3Q8TE67 593 aaKnown RBP9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 TTC9Q92623 222 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 CYTH2Q99418 400 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 ACSS3Q9H6R3 686 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 VPS37BQ9H9H4 285 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 ETNK1Q9HBU6 452 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 FGF22Q9HCT0 170 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 DOLKQ9UPQ8 538 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 PLEKHM1Q9Y4G2 1056 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 PCDHGC4Q9Y5F7 938 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 TEX264Q9Y6I9 313 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 ABCA12Q86UK0 2595 aa9.34□□□□□ -0.91
TMEM39A-208ENST00000486159 SCN8AQ9UQD0 1980 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 TEX51A0A1B0GUA7 166 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 NOBOXO60393 691 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 RASGRP1O95267 797 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 PEX11BO96011 259 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 RPLP0P05388 317 aaKnown RBP9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 APRTP07741 180 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 WT1P19544 449 aaPredicted RBP9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 RBMS1P29558 406 aaKnown RBP9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 HPDP32754 393 aaPredicted RBP9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 GARSP41250 739 aaKnown RBP9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 MAGEA3P43357 314 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 POLD2P49005 469 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 NDST2P52849 883 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 MAXP61244 160 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 CFHR1Q03591 330 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 ELP6Q0PNE2 266 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 AP1B1Q10567 949 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 SPIDRQ14159 915 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 IHHQ14623 411 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 LONRF1Q17RB8 773 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 BBS9Q3SYG4 887 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 TAF1BQ53T94 588 aaPredicted RBP9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 FNBP1LQ5T0N5 605 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 TIGD7Q6NT04 549 aaPredicted RBP9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 ESRP1Q6NXG1 681 aaKnown RBP9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 LRRC8BQ6P9F7 803 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 C3orf62Q6ZUJ4 267 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 CCDC13Q8IYE1 715 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 LSMEM2Q8N112 164 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms