RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 DRG2P55039 364 aaKnown RBP17.41■□□□□ 0.38
COL6A1-204ENST00000486023 C16orf72Q14CZ0 275 aa17.41■□□□□ 0.38
COL6A1-204ENST00000486023 SEL1L2Q5TEA6 688 aa17.41■□□□□ 0.38
COL6A1-204ENST00000486023 ZDHHC20Q5W0Z9 365 aa17.41■□□□□ 0.38
COL6A1-204ENST00000486023 RANBP10Q6VN20 620 aa17.41■□□□□ 0.38
COL6A1-204ENST00000486023 DET1Q7L5Y6 550 aa17.41■□□□□ 0.38
COL6A1-204ENST00000486023 SLITRK4Q8IW52 837 aa17.41■□□□□ 0.38
COL6A1-204ENST00000486023 TRIM48Q8IWZ4 208 aa17.41■□□□□ 0.38
COL6A1-204ENST00000486023 OR10G6Q8NH81 332 aa17.41■□□□□ 0.38
COL6A1-204ENST00000486023 ZNF398Q8TD17 642 aa17.41■□□□□ 0.38
COL6A1-204ENST00000486023 ATG4AQ8WYN0 398 aa17.41■□□□□ 0.38
COL6A1-204ENST00000486023 LRRC45Q96CN5 670 aa17.41■□□□□ 0.38
COL6A1-204ENST00000486023 HES6Q96HZ4 224 aa17.41■□□□□ 0.38
COL6A1-204ENST00000486023 CCDC74BQ96LY2 380 aa17.41■□□□□ 0.38
COL6A1-204ENST00000486023 FCRL3Q96P31 734 aaPredicted RBP17.41■□□□□ 0.38
COL6A1-204ENST00000486023 VPS35Q96QK1 796 aa17.41■□□□□ 0.38
COL6A1-204ENST00000486023 TMEM121Q9BTD3 319 aa17.41■□□□□ 0.38
COL6A1-204ENST00000486023 CPNE5Q9HCH3 593 aa17.41■□□□□ 0.38
COL6A1-204ENST00000486023 TMEM9Q9P0T7 183 aa17.41■□□□□ 0.38
COL6A1-204ENST00000486023 NFKBIL1Q9UBC1 381 aaPredicted RBP17.41■□□□□ 0.38
COL6A1-204ENST00000486023 KLHL3Q9UH77 587 aa17.41■□□□□ 0.38
COL6A1-204ENST00000486023 IGHV5-10-1A0A0J9YXX1 117 aa17.4■□□□□ 0.38
COL6A1-204ENST00000486023 SLC2A4P14672 509 aa17.4■□□□□ 0.38
COL6A1-204ENST00000486023 TPH1P17752 444 aa17.4■□□□□ 0.38
COL6A1-204ENST00000486023 ADRA1AP35348 466 aa17.4■□□□□ 0.38
COL6A1-204ENST00000486023 ETV5P41161 510 aa17.4■□□□□ 0.38
COL6A1-204ENST00000486023 GDF10P55107 478 aa17.4■□□□□ 0.38
COL6A1-204ENST00000486023 NR1D2Q14995 579 aa17.4■□□□□ 0.38
COL6A1-204ENST00000486023 NAT14Q8WUY8 206 aa17.4■□□□□ 0.38
COL6A1-204ENST00000486023 USP7Q93009 1102 aa17.4■□□□□ 0.38
COL6A1-204ENST00000486023 TBC1D10AQ9BXI6 508 aa17.4■□□□□ 0.38
COL6A1-204ENST00000486023 FAM96AQ9H5X1 160 aa17.4■□□□□ 0.38
COL6A1-204ENST00000486023 ASB8Q9H765 288 aa17.4■□□□□ 0.38
COL6A1-204ENST00000486023 PIH1D1Q9NWS0 290 aaKnown RBP17.4■□□□□ 0.38
COL6A1-204ENST00000486023 SCHIP1Q9P0W5 487 aaPredicted RBP17.4■□□□□ 0.38
COL6A1-204ENST00000486023 CPNE7Q9UBL6 633 aa17.4■□□□□ 0.38
COL6A1-204ENST00000486023 FAM8A1Q9UBU6 413 aa17.4■□□□□ 0.38
COL6A1-204ENST00000486023 FKBPLQ9UIM3 349 aa17.4■□□□□ 0.38
COL6A1-204ENST00000486023 ADAMTS20P59510 1910 aa17.4■□□□□ 0.38
COL6A1-204ENST00000486023 FAM208BQ5VWN6 2430 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 C5orf60A6NFR6 353 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 OR2AG2A6NM03 316 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 CDRT15L2A8MXV6 281 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 GPR89AB7ZAQ6 455 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 CCL22O00626 93 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 CHUKO15111 745 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 ARHGAP6O43182 974 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 DUX1O43812 170 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 POP7O75817 140 aaKnown RBP17.39■□□□□ 0.37
COL6A1-204ENST00000486023 PRAMEF1O95521 474 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 METTL18O95568 372 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 VIPP01282 170 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 GPR89BP0CG08 455 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 CCL4P13236 92 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 MSH3P20585 1137 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 IDSP22304 550 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 CSF2RBP32927 897 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 FASLGP48023 281 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 CFHR1Q03591 330 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 SNX1Q13596 522 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 ITGA9Q13797 1035 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 TAF1AQ15573 450 aaPredicted RBP17.39■□□□□ 0.37
COL6A1-204ENST00000486023 PARP6Q2NL67 630 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 LDLRAP1Q5SW96 308 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.39■□□□□ 0.37
COL6A1-204ENST00000486023 GPRC6AQ5T6X5 926 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 ARHGAP40Q5TG30 622 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 TMEM220Q6QAJ8 160 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 IGF2-ASQ6U949 168 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 ZNF547Q8IVP9 402 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 RASGEF1AQ8N9B8 481 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 OR13C4Q8NGS5 318 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 BRSK1Q8TDC3 778 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 SH3KBP1Q96B97 665 aa17.39■□□□□ 0.37
COL6A1-204ENST00000486023 CCDC97Q96F63 343 aaPredicted RBP17.39■□□□□ 0.37
COL6A1-204ENST00000486023 SARS2Q9NP81 518 aaKnown RBP17.39■□□□□ 0.37
COL6A1-204ENST00000486023 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.39■□□□□ 0.37
COL6A1-204ENST00000486023 KIR2DS5A0A0G2JLQ3 304 aa17.38■□□□□ 0.37
COL6A1-204ENST00000486023 PRAMEF33A0A0G2JMD5 474 aa17.38■□□□□ 0.37
COL6A1-204ENST00000486023 A0A0G2JNG1 304 aa17.38■□□□□ 0.37
COL6A1-204ENST00000486023 OR5K4A6NMS3 321 aa17.38■□□□□ 0.37
COL6A1-204ENST00000486023 KIR2DS3K7RE56 304 aa17.38■□□□□ 0.37
COL6A1-204ENST00000486023 PRAMEF10O60809 474 aa17.38■□□□□ 0.37
COL6A1-204ENST00000486023 CRTAMO95727 393 aa17.38■□□□□ 0.37
COL6A1-204ENST00000486023 IFNB1P01574 187 aa17.38■□□□□ 0.37
COL6A1-204ENST00000486023 TYRP1P17643 537 aa17.38■□□□□ 0.37
COL6A1-204ENST00000486023 VCLP18206 1134 aa17.38■□□□□ 0.37
COL6A1-204ENST00000486023 CSTF2P33240 577 aaKnown RBP eCLIP17.38■□□□□ 0.37
COL6A1-204ENST00000486023 CTSCP53634 463 aa17.38■□□□□ 0.37
COL6A1-204ENST00000486023 LIMK2P53671 638 aa17.38■□□□□ 0.37
COL6A1-204ENST00000486023 GPLD1P80108 840 aa17.38■□□□□ 0.37
COL6A1-204ENST00000486023 KLF1Q13351 362 aaPredicted RBP17.38■□□□□ 0.37
COL6A1-204ENST00000486023 SEPT6Q14141 434 aa17.38■□□□□ 0.37
COL6A1-204ENST00000486023 KIR2DS5Q14953 304 aa17.38■□□□□ 0.37
COL6A1-204ENST00000486023 RPS6KA1Q15418 735 aa17.38■□□□□ 0.37
COL6A1-204ENST00000486023 FNBP1LQ5T0N5 605 aa17.38■□□□□ 0.37
COL6A1-204ENST00000486023 FAM129CQ86XR2 697 aa17.38■□□□□ 0.37
COL6A1-204ENST00000486023 CCDC112Q8NEF3 446 aa17.38■□□□□ 0.37
COL6A1-204ENST00000486023 OR4D9Q8NGE8 314 aa17.38■□□□□ 0.37
COL6A1-204ENST00000486023 C1orf54Q8WWF1 131 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms