RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 ZFYVE1Q9HBF4 777 aa12.82□□□□□ -0.36
HDAC6-227ENST00000485102 MAGEE1Q9HCI5 957 aa12.82□□□□□ -0.36
HDAC6-227ENST00000485102 SLC40A1Q9NP59 571 aa12.82□□□□□ -0.36
HDAC6-227ENST00000485102 SLC23A2Q9UGH3 650 aa12.82□□□□□ -0.36
HDAC6-227ENST00000485102 ANAPC7Q9UJX3 599 aa12.82□□□□□ -0.36
HDAC6-227ENST00000485102 MRPS18BQ9Y676 258 aaKnown RBP12.82□□□□□ -0.36
HDAC6-227ENST00000485102 CREBBPQ92793 2442 aa12.82□□□□□ -0.36
HDAC6-227ENST00000485102 ZNF106Q9H2Y7 1883 aaKnown RBP12.82□□□□□ -0.36
HDAC6-227ENST00000485102 HIVEP3Q5T1R4 2406 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 K7EM74 188 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 KMOO15229 486 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 MTSS1O43312 755 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 VEGFDO43915 354 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 KCNJ13O60928 360 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 SPAG6O75602 509 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 CREG1O75629 220 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 RFPL1O75677 317 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 NDUFA10O95299 355 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 FURINP09958 794 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 CCNYL3P0C7X3 344 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 ZNF7P17097 686 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-227ENST00000485102 AMD1P17707 334 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 CAPZBP47756 277 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 SLC10A2Q12908 348 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-227ENST00000485102 ERV3-1Q14264 604 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 ZNF569Q5MCW4 686 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 ASB18Q6ZVZ8 466 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 TMC3Q7Z5M5 1100 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 MAP7D3Q8IWC1 876 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 CNTD1Q8N815 330 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 GALNT6Q8NCL4 622 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 GPR26Q8NDV2 337 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 STAMBPL1Q96FJ0 436 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 ZDHHC12Q96GR4 267 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 BTBD6Q96KE9 485 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 OR6C1Q96RD1 312 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 TRIB3Q96RU7 358 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 NUP85Q9BW27 656 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 TRIM5Q9C035 493 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 OR2AG1Q9H205 316 aa12.81□□□□□ -0.36
HDAC6-227ENST00000485102 A0A1W2PQJ5 194 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 ZNF487B1APH4 448 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 MTA2O94776 668 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 KIAA0754O94854 1291 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 BRAFP15056 766 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 TYRP1P17643 537 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 NELFEP18615 380 aaKnown RBP12.8□□□□□ -0.36
HDAC6-227ENST00000485102 LEPRP48357 1165 aaKnown RBP12.8□□□□□ -0.36
HDAC6-227ENST00000485102 SH3BP2P78314 561 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 IFI35P80217 286 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-227ENST00000485102 PPIDQ08752 370 aaKnown RBP12.8□□□□□ -0.36
HDAC6-227ENST00000485102 SEMA5AQ13591 1074 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 DNASE1L3Q13609 305 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 SLC14A2Q15849 920 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 ATP13A4Q4VNC1 1196 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 LRRTM4Q86VH4 590 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 PPP1R3BQ86XI6 285 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 RASGRP3Q8IV61 690 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 ZNF547Q8IVP9 402 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 TRIM48Q8IWZ4 208 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 PQLC3Q8N755 202 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 KCTD6Q8NC69 237 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 GALNT11Q8NCW6 608 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 DTX3LQ8TDB6 740 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 TADA1Q96BN2 335 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 SLC41A2Q96JW4 573 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 NAP1L5Q96NT1 182 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-227ENST00000485102 TGM7Q96PF1 710 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 SRPK1Q96SB4 655 aaKnown RBP12.8□□□□□ -0.36
HDAC6-227ENST00000485102 SPATA16Q9BXB7 569 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 GPR87Q9BY21 358 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 BRD8Q9H0E9 1235 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 MLXIPLQ9NP71 852 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 LHX9Q9NQ69 397 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 DTLQ9NZJ0 730 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 IFNKQ9P0W0 207 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 TLK1Q9UKI8 766 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 TTLL3Q9Y4R7 772 aa12.8□□□□□ -0.36
HDAC6-227ENST00000485102 SHANK1Q9Y566 2161 aa12.79□□□□□ -0.36
HDAC6-227ENST00000485102 MYO9AB2RTY4 2548 aa12.79□□□□□ -0.36
HDAC6-227ENST00000485102 BLACEA4D250 179 aa12.79□□□□□ -0.36
HDAC6-227ENST00000485102 JCHAINP01591 159 aa12.79□□□□□ -0.36
HDAC6-227ENST00000485102 KRT7P08729 469 aa12.79□□□□□ -0.36
HDAC6-227ENST00000485102 IDSP22304 550 aa12.79□□□□□ -0.36
HDAC6-227ENST00000485102 CD86P42081 329 aa12.79□□□□□ -0.36
HDAC6-227ENST00000485102 SEPHS1P49903 392 aa12.79□□□□□ -0.36
HDAC6-227ENST00000485102 MLLT10P55197 1068 aa12.79□□□□□ -0.36
HDAC6-227ENST00000485102 GBE1Q04446 702 aa12.79□□□□□ -0.36
HDAC6-227ENST00000485102 INSCQ1MX18 579 aa12.79□□□□□ -0.36
HDAC6-227ENST00000485102 C4orf17Q53FE4 359 aa12.79□□□□□ -0.36
HDAC6-227ENST00000485102 CACHD1Q5VU97 1274 aa12.79□□□□□ -0.36
HDAC6-227ENST00000485102 PAPD7Q5XG87 772 aaKnown RBP12.79□□□□□ -0.36
HDAC6-227ENST00000485102 C11orf96Q7Z7L8 435 aa12.79□□□□□ -0.36
HDAC6-227ENST00000485102 VSIG1Q86XK7 387 aa12.79□□□□□ -0.36
HDAC6-227ENST00000485102 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.79□□□□□ -0.36
HDAC6-227ENST00000485102 THAP4Q8WY91 577 aa12.79□□□□□ -0.36
HDAC6-227ENST00000485102 UBXN4Q92575 508 aa12.79□□□□□ -0.36
HDAC6-227ENST00000485102 RSC1A1Q92681 617 aa12.79□□□□□ -0.36
HDAC6-227ENST00000485102 IMP4Q96G21 291 aaKnown RBP12.79□□□□□ -0.36
HDAC6-227ENST00000485102 MRFAP1L1Q96HT8 127 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms