RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 SEPT14Q6ZU15 432 aa2.99□□□□□ -1.93
VPS50-216ENST00000484954 GSTA5Q7RTV2 222 aa2.99□□□□□ -1.93
VPS50-216ENST00000484954 SMAP1Q8IYB5 467 aaPredicted RBP2.99□□□□□ -1.93
VPS50-216ENST00000484954 SPEM1Q8N4L4 309 aa2.99□□□□□ -1.93
VPS50-216ENST00000484954 TSPYL6Q8N831 410 aa2.99□□□□□ -1.93
VPS50-216ENST00000484954 ZNF248Q8NDW4 579 aa2.99□□□□□ -1.93
VPS50-216ENST00000484954 ZKSCAN4Q969J2 545 aaPredicted RBP2.99□□□□□ -1.93
VPS50-216ENST00000484954 MAP7D2Q96T17 732 aa2.99□□□□□ -1.93
VPS50-216ENST00000484954 GFI1Q99684 422 aa2.99□□□□□ -1.93
VPS50-216ENST00000484954 MOV10L1Q9BXT6 1211 aaKnown RBP2.99□□□□□ -1.93
VPS50-216ENST00000484954 RANBP17Q9H2T7 1088 aaKnown RBP2.99□□□□□ -1.93
VPS50-216ENST00000484954 PDZD7Q9H5P4 517 aa2.99□□□□□ -1.93
VPS50-216ENST00000484954 BICC1Q9H694 974 aaKnown RBP2.99□□□□□ -1.93
VPS50-216ENST00000484954 PREBQ9HCU5 417 aa2.99□□□□□ -1.93
VPS50-216ENST00000484954 MTMR10Q9NXD2 777 aa2.99□□□□□ -1.93
VPS50-216ENST00000484954 PTTG2Q9NZH5 202 aa2.99□□□□□ -1.93
VPS50-216ENST00000484954 DNAJB4Q9UDY4 337 aa2.99□□□□□ -1.93
VPS50-216ENST00000484954 ACAD8Q9UKU7 415 aa2.99□□□□□ -1.93
VPS50-216ENST00000484954 R3HDM2Q9Y2K5 976 aaKnown RBP2.99□□□□□ -1.93
VPS50-216ENST00000484954 JRKLQ9Y4A0 524 aa2.99□□□□□ -1.93
VPS50-216ENST00000484954 IGKV3D-15A0A087WSY6 115 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 A0A1W2PPI3 338 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 SLC22A2O15244 555 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 PCDH7O60245 1069 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 ZNF821O75541 412 aaPredicted RBP2.98□□□□□ -1.93
VPS50-216ENST00000484954 PDE9AO76083 593 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 TFAP2AP05549 437 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 LIPFP07098 398 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 SPARCP09486 303 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 NR2F2P24468 414 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 HRH2P25021 359 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 ELF1P32519 619 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 HSD17B4P51659 736 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 DRG2P55039 364 aaKnown RBP2.98□□□□□ -1.93
VPS50-216ENST00000484954 TAS2R40P59535 323 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 CD81P60033 236 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 PMP22Q01453 160 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 KIR2DS3Q14952 304 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 CCNG2Q16589 344 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 ZC2HC1BQ5TFG8 222 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 CLEC17AQ6ZS10 378 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 PLEKHM3Q6ZWE6 761 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 MYPOPQ86VE0 399 aaPredicted RBP2.98□□□□□ -1.93
VPS50-216ENST00000484954 LONP2Q86WA8 852 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 DIS3L2Q8IYB7 885 aaKnown RBP2.98□□□□□ -1.93
VPS50-216ENST00000484954 PM20D2Q8IYS1 436 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 SLC38A9Q8NBW4 561 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 TMEM190Q8WZ59 177 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 LRR1Q96L50 414 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 SEMA3CQ99985 751 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 MBNL1Q9NR56 388 aaKnown RBP2.98□□□□□ -1.93
VPS50-216ENST00000484954 C9orf78Q9NZ63 289 aaPredicted RBP2.98□□□□□ -1.93
VPS50-216ENST00000484954 CWC15Q9P013 229 aaKnown RBP2.98□□□□□ -1.93
VPS50-216ENST00000484954 MMP24Q9Y5R2 645 aa2.98□□□□□ -1.93
VPS50-216ENST00000484954 TEX13DA0A0J9YY54 714 aaPredicted RBP2.97□□□□□ -1.93
VPS50-216ENST00000484954 A0A1B0GVC2 190 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 FAM237BA0A1B0GVD1 139 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 HHLA1C9JL84 531 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 NR5A2O00482 541 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 EXTL3O43909 919 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 SLC25A12O75746 678 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 IPO7O95373 1038 aaKnown RBP2.97□□□□□ -1.93
VPS50-216ENST00000484954 SELLP14151 372 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 ZNF23P17027 643 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 HOXC8P31273 242 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 MAP2K2P36507 400 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 PRCPP42785 496 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 CCR9P51686 369 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 MRPS34P82930 218 aaKnown RBP2.97□□□□□ -1.93
VPS50-216ENST00000484954 MED22Q15528 200 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 TSTQ16762 297 aaKnown RBP2.97□□□□□ -1.93
VPS50-216ENST00000484954 TMEM198Q66K66 360 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 SLC5A8Q8N695 610 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 EMC1Q8N766 993 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 OR8K5Q8NH50 307 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 ZNF473Q8WTR7 871 aaKnown RBP2.97□□□□□ -1.93
VPS50-216ENST00000484954 DNAAF4Q8WXU2 420 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 SMARCE1Q969G3 411 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 FAM149B1Q96BN6 582 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 ABHD8Q96I13 439 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 ZNF599Q96NL3 588 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 MAGIXQ9H6Y5 334 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 PELI2Q9HAT8 420 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 C2CD2Q9Y426 696 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 KCNE2Q9Y6J6 123 aa2.97□□□□□ -1.93
VPS50-216ENST00000484954 FLT1P17948 1338 aa2.96□□□□□ -1.93
VPS50-216ENST00000484954 CACNA1FO60840 1977 aa2.96□□□□□ -1.94
VPS50-216ENST00000484954 KANSL1LA0AUZ9 987 aa2.96□□□□□ -1.94
VPS50-216ENST00000484954 TPD52L2O43399 206 aaKnown RBP2.96□□□□□ -1.94
VPS50-216ENST00000484954 ZNF217O75362 1048 aa2.96□□□□□ -1.94
VPS50-216ENST00000484954 GCNT3O95395 438 aa2.96□□□□□ -1.94
VPS50-216ENST00000484954 MMP15P51511 669 aa2.96□□□□□ -1.94
VPS50-216ENST00000484954 MLLT10P55197 1068 aa2.96□□□□□ -1.94
VPS50-216ENST00000484954 RPS3AP61247 264 aaKnown RBP2.96□□□□□ -1.94
VPS50-216ENST00000484954 SOWAHCQ53LP3 525 aaPredicted RBP2.96□□□□□ -1.94
VPS50-216ENST00000484954 ZNF772Q68DY9 489 aaPredicted RBP2.96□□□□□ -1.94
VPS50-216ENST00000484954 C1orf52Q8N6N3 182 aaKnown RBP2.96□□□□□ -1.94
VPS50-216ENST00000484954 HJURPQ8NCD3 748 aaPredicted RBP2.96□□□□□ -1.94
VPS50-216ENST00000484954 MAPK1IP1LQ8NDC0 245 aa2.96□□□□□ -1.94
VPS50-216ENST00000484954 PRMT6Q96LA8 375 aaPredicted RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms