RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 MAP3K21Q5TCX8 1036 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 MROH9Q5TGP6 573 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 SLC30A6Q6NXT4 461 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 TAC4Q86UU9 113 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 NUP93Q8N1F7 819 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 CISD2Q8N5K1 135 aaKnown RBP7.73□□□□□ -1.17
SNX13-208ENST00000482558 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.73□□□□□ -1.17
SNX13-208ENST00000482558 LSM14AQ8ND56 463 aaKnown RBP7.73□□□□□ -1.17
SNX13-208ENST00000482558 SIMC1Q8NDZ2 872 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 CALML6Q8TD86 181 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 NSMCE1Q8WV22 266 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 LPPQ93052 612 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 FBXW5Q969U6 566 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 SPATA17Q96L03 361 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 IL12RB2Q99665 862 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 RBBP8Q99708 897 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 CNPPD1Q9BV87 410 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 KIFC1Q9BW19 673 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 UNKQ9C0B0 810 aaKnown RBP7.73□□□□□ -1.17
SNX13-208ENST00000482558 ZCWPW1Q9H0M4 648 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 MS4A5Q9H3V2 200 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 PLAC1Q9HBJ0 212 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 NOD2Q9HC29 1040 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.73□□□□□ -1.17
SNX13-208ENST00000482558 TMEM161AQ9NX61 479 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 TIMM13Q9Y5L4 95 aaPredicted RBP7.73□□□□□ -1.17
SNX13-208ENST00000482558 NPFFR2Q9Y5X5 522 aa7.73□□□□□ -1.17
SNX13-208ENST00000482558 A0A0G2JND7 137 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 WDR91A4D1P6 747 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 KCNU1A8MYU2 1149 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 H7C0S8 307 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 PLIN3O60664 434 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 SYPP08247 313 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 HOXB8P17481 243 aaPredicted RBP7.72□□□□□ -1.17
SNX13-208ENST00000482558 ACLYP53396 1101 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 SLC5A3P53794 718 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 MLLT6P55198 1093 aaPredicted RBP7.72□□□□□ -1.17
SNX13-208ENST00000482558 PITX1P78337 314 aaPredicted RBP7.72□□□□□ -1.17
SNX13-208ENST00000482558 PRKCZQ05513 592 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 CYP4F3Q08477 520 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 BST1Q10588 318 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 CDC16Q13042 620 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 BFSP2Q13515 415 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 HNRNPDQ14103 355 aaKnown RBP7.72□□□□□ -1.17
SNX13-208ENST00000482558 BTG3Q14201 252 aaPredicted RBP7.72□□□□□ -1.17
SNX13-208ENST00000482558 CHI3L2Q15782 390 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 DNAL1Q4LDG9 190 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 TAF1BQ53T94 588 aaPredicted RBP7.72□□□□□ -1.17
SNX13-208ENST00000482558 WLSQ5T9L3 541 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 MANEALQ5VSG8 457 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 AFMIDQ63HM1 303 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 RWDD4Q6NW29 188 aaKnown RBP7.72□□□□□ -1.17
SNX13-208ENST00000482558 TRMT10BQ6PF06 316 aaKnown RBP7.72□□□□□ -1.17
SNX13-208ENST00000482558 CD300LGQ6UXG3 332 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 KIAA0408Q6ZU52 694 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 C16orf59Q7L2K0 433 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 KRT74Q7RTS7 529 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 TMPRSS7Q7RTY8 843 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 GPRIN1Q7Z2K8 1008 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 GALNT7Q86SF2 657 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 UMODL1-AS1Q8N2C9 162 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 MPP5Q8N3R9 675 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 RTL3Q8N8U3 475 aaKnown RBP7.72□□□□□ -1.17
SNX13-208ENST00000482558 ATP6V0D2Q8N8Y2 350 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 RNF169Q8NCN4 708 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 OR8H1Q8NGG4 311 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 SPPL2BQ8TCT7 592 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 NDRG1Q92597 394 aaKnown RBP7.72□□□□□ -1.17
SNX13-208ENST00000482558 DPF3Q92784 378 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 PEX13Q92968 403 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 KLF6Q99612 283 aaPredicted RBP7.72□□□□□ -1.17
SNX13-208ENST00000482558 BTBD10Q9BSF8 475 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 MAGEB5Q9BZ81 275 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 GLOD4Q9HC38 313 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 TRPC7Q9HCX4 862 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 PARD6AQ9NPB6 346 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 SYBUQ9NX95 663 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 IL37Q9NZH6 218 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 EPS15L1Q9UBC2 864 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 HEY2Q9UBP5 337 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 SRRDQ9UH36 339 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 BAIAP2L1Q9UHR4 511 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 IPO11Q9UI26 975 aaKnown RBP7.72□□□□□ -1.17
SNX13-208ENST00000482558 TLK1Q9UKI8 766 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 TCFL5Q9UL49 500 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 ABT1Q9ULW3 272 aaKnown RBP7.72□□□□□ -1.17
SNX13-208ENST00000482558 BACE2Q9Y5Z0 518 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 CDY1Q9Y6F8 540 aa7.72□□□□□ -1.17
SNX13-208ENST00000482558 TDRD15B5MCY1 1934 aaKnown RBP7.72□□□□□ -1.17
SNX13-208ENST00000482558 PATJQ8NI35 1801 aa7.71□□□□□ -1.17
SNX13-208ENST00000482558 GOLGA8QA0A0J9YX86 632 aa7.71□□□□□ -1.18
SNX13-208ENST00000482558 ZCWPW2A0A1B0GU75 182 aa7.71□□□□□ -1.18
SNX13-208ENST00000482558 FAM92AA1XBS5 289 aa7.71□□□□□ -1.18
SNX13-208ENST00000482558 GOLGA8OA6NCC3 632 aa7.71□□□□□ -1.18
SNX13-208ENST00000482558 GOLGA8NF8WBI6 632 aa7.71□□□□□ -1.18
SNX13-208ENST00000482558 SLCO1B7G3V0H7 640 aa7.71□□□□□ -1.18
SNX13-208ENST00000482558 FAM72CH0Y354 149 aa7.71□□□□□ -1.18
SNX13-208ENST00000482558 KCNK1O00180 336 aa7.71□□□□□ -1.18
SNX13-208ENST00000482558 SYT5O00445 386 aa7.71□□□□□ -1.18
SNX13-208ENST00000482558 TADA2AO75478 443 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms