RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 OR2AP1Q8NGE2 309 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 GABPB2Q8TAK5 448 aaPredicted RBP14.33□□□□□ -0.12
CHD3-211ENST00000481999 PIP4K2CQ8TBX8 421 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 EEF1AKMT1Q8WVE0 214 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 HERVK_113Q902F9 699 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 RSPRY1Q96DX4 576 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 GSTO2Q9H4Y5 243 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 ZFYVE1Q9HBF4 777 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 MRGBPQ9NV56 204 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 MAFFQ9ULX9 164 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 GBF1Q92538 1859 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 A0A0J9YYE9 177 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 TRBC1P01850 177 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 CYBBP04839 570 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 UGT2B4P06133 528 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 CHRM3P20309 590 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 AGTR2P50052 363 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 ART3Q13508 389 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 GEN1Q17RS7 908 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 PTGR2Q8N8N7 351 aaPredicted RBP14.32□□□□□ -0.12
CHD3-211ENST00000481999 LKAAEAR1Q8TD35 194 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 ZNF707Q96C28 371 aaPredicted RBP14.32□□□□□ -0.12
CHD3-211ENST00000481999 MAELQ96JY0 434 aaKnown RBP14.32□□□□□ -0.12
CHD3-211ENST00000481999 KCNA7Q96RP8 456 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 WDR41Q9HAD4 459 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 IL26Q9NPH9 171 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 GIMAP2Q9UG22 337 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 PKP3Q9Y446 797 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 DTNAQ9Y4J8 743 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 COPG1Q9Y678 874 aaKnown RBP14.32□□□□□ -0.12
CHD3-211ENST00000481999 PRSS21Q9Y6M0 314 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 SATB1Q01826 763 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 MPP7Q5T2T1 576 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 C22orf39Q6P5X5 142 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 CUZD1Q86UP6 607 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 TMEM126BQ8IUX1 230 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 SFTPA1Q8IWL2 248 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 GALNT15Q8N3T1 639 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 CEP70Q8NHQ1 597 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 IRF7Q92985 503 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 CCDC126Q96EE4 140 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 SLC45A3Q96JT2 553 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 FAR2Q96K12 515 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 CCDC68Q9H2F9 335 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 PIDD1Q9HB75 910 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 ZDHHC4Q9NPG8 344 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 CD84Q9UIB8 345 aa14.32□□□□□ -0.12
CHD3-211ENST00000481999 MBD1Q9UIS9 605 aaPredicted RBP14.32□□□□□ -0.12
CHD3-211ENST00000481999 SPEGQ15772 3267 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 HTRA2O43464 458 aaPredicted RBP14.31□□□□□ -0.12
CHD3-211ENST00000481999 TSPAN12O95859 305 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 BPIP17213 487 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 LHCGRP22888 699 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 EPHA5P54756 1037 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 AP1S1P61966 158 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 CDKN3Q16667 212 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 PRSS36Q5K4E3 855 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 ZNF678Q5SXM1 525 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 THEMIS2Q5TEJ8 643 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 CYHR1Q6ZMK1 362 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 ADIPOR2Q86V24 386 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 C12orf40Q86WS4 652 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 ADGRG2Q8IZP9 1017 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 CD200R1Q8TD46 325 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 DLG3Q92796 817 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 ASIC4Q96FT7 647 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 ATOH8Q96SQ7 321 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 CENPKQ9BS16 269 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 SPHK2Q9NRA0 654 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 TAS2R13Q9NYV9 303 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 OTOL1A6NHN0 477 aaPredicted RBP14.31□□□□□ -0.12
CHD3-211ENST00000481999 BTN3A1O00481 513 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 CFLARO15519 480 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 RBP1P09455 135 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 PABPC1P11940 636 aaKnown RBP14.31□□□□□ -0.12
CHD3-211ENST00000481999 ENO3P13929 434 aaPredicted RBP14.31□□□□□ -0.12
CHD3-211ENST00000481999 XRCC1P18887 633 aaPredicted RBP14.31□□□□□ -0.12
CHD3-211ENST00000481999 CES1P23141 567 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 ME2P23368 584 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 SUOXP51687 545 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 SH3BP2P78314 561 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 ECT2LQ008S8 904 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 CEACAM7Q14002 265 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 GRM2Q14416 872 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 ZNF77Q15935 545 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 C18orf21Q32NC0 220 aaPredicted RBP14.31□□□□□ -0.12
CHD3-211ENST00000481999 UNC50Q53HI1 259 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 RARS2Q5T160 578 aaKnown RBP14.31□□□□□ -0.12
CHD3-211ENST00000481999 AFAP1L2Q8N4X5 818 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 GPR26Q8NDV2 337 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 CATSPER1Q8NEC5 780 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 LRGUKQ96M69 825 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 ASB8Q9H765 288 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 MAGEE1Q9HCI5 957 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 INTS10Q9NVR2 710 aaKnown RBP14.31□□□□□ -0.12
CHD3-211ENST00000481999 RIMKLBQ9ULI2 386 aa14.31□□□□□ -0.12
CHD3-211ENST00000481999 TTC34A8MYJ7 566 aa14.3□□□□□ -0.12
CHD3-211ENST00000481999 SDHDO14521 159 aa14.3□□□□□ -0.12
CHD3-211ENST00000481999 GFAPP14136 432 aa14.3□□□□□ -0.12
CHD3-211ENST00000481999 PKMP14618 531 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms