RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 AXIN1O15169 862 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 POLR3GO15318 223 aaPredicted RBP17.37■□□□□ 0.37
UPF3A-206ENST00000480362 TYROBPO43914 113 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 VPS26AO75436 327 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 SLC35E2BP0CK96 405 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 CHRM3P20309 590 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 TEAD1P28347 426 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 CCR5P51681 352 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 IRF9Q00978 393 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 TMEM115Q12893 351 aaPredicted RBP17.37■□□□□ 0.37
UPF3A-206ENST00000480362 MPP2Q14168 576 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 TAF1BQ53T94 588 aaPredicted RBP17.37■□□□□ 0.37
UPF3A-206ENST00000480362 DET1Q7L5Y6 550 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 PIM3Q86V86 326 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 HEATR4Q86WZ0 1026 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 RASGEF1AQ8N9B8 481 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 FAM76AQ8TAV0 307 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 FAM136AQ96C01 138 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 SGF29Q96ES7 293 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 APOPT1Q96IL0 206 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 GPR21Q99679 349 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 GPAMQ9HCL2 828 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 TRIM39Q9HCM9 518 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 TAS2R13Q9NYV9 303 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 GALPQ9UBC7 116 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 MBD1Q9UIS9 605 aaPredicted RBP17.37■□□□□ 0.37
UPF3A-206ENST00000480362 SMG5Q9UPR3 1016 aaKnown RBP17.37■□□□□ 0.37
UPF3A-206ENST00000480362 INVSQ9Y283 1065 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 ANKRD6Q9Y2G4 727 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 ACOT9Q9Y305 439 aa17.37■□□□□ 0.37
UPF3A-206ENST00000480362 OAS3Q9Y6K5 1087 aaKnown RBP17.37■□□□□ 0.37
UPF3A-206ENST00000480362 A0A087X1B8 175 aa17.36■□□□□ 0.37
UPF3A-206ENST00000480362 E5RI56 91 aa17.36■□□□□ 0.37
UPF3A-206ENST00000480362 PRPF4O43172 522 aaKnown RBP eCLIP17.36■□□□□ 0.373e-7■■■□□ 17.1
UPF3A-206ENST00000480362 LATO43561 262 aa17.36■□□□□ 0.37
UPF3A-206ENST00000480362 FSBPO95073 299 aa17.36■□□□□ 0.37
UPF3A-206ENST00000480362 TRIM16O95361 564 aa17.36■□□□□ 0.37
UPF3A-206ENST00000480362 OR56A5P0C7T3 313 aa17.36■□□□□ 0.37
UPF3A-206ENST00000480362 ITGB6P18564 788 aa17.36■□□□□ 0.37
UPF3A-206ENST00000480362 CD9P21926 228 aa17.36■□□□□ 0.37
UPF3A-206ENST00000480362 IGFALSP35858 605 aa17.36■□□□□ 0.37
UPF3A-206ENST00000480362 TRIM23P36406 574 aa17.36■□□□□ 0.37
UPF3A-206ENST00000480362 CCT5P48643 541 aa17.36■□□□□ 0.37
UPF3A-206ENST00000480362 CDK3Q00526 305 aa17.36■□□□□ 0.37
UPF3A-206ENST00000480362 PDAP1Q13442 181 aaKnown RBP17.36■□□□□ 0.37
UPF3A-206ENST00000480362 TMEM207Q6UWW9 146 aa17.36■□□□□ 0.37
UPF3A-206ENST00000480362 KDM7AQ6ZMT4 941 aa17.36■□□□□ 0.37
UPF3A-206ENST00000480362 ADGRG6Q86SQ4 1221 aa17.36■□□□□ 0.37
UPF3A-206ENST00000480362 ARFGAP2Q8N6H7 521 aa17.36■□□□□ 0.37
UPF3A-206ENST00000480362 KCNJ9Q92806 393 aa17.36■□□□□ 0.37
UPF3A-206ENST00000480362 COX14Q96I36 57 aa17.36■□□□□ 0.37
UPF3A-206ENST00000480362 MYOCQ99972 504 aa17.36■□□□□ 0.37
UPF3A-206ENST00000480362 TEX101Q9BY14 249 aa17.36■□□□□ 0.37
UPF3A-206ENST00000480362 POPDC3Q9HBV1 291 aa17.36■□□□□ 0.37
UPF3A-206ENST00000480362 SARS2Q9NP81 518 aaKnown RBP17.36■□□□□ 0.37
UPF3A-206ENST00000480362 MKS1Q9NXB0 559 aa17.36■□□□□ 0.37
UPF3A-206ENST00000480362 DCDC2Q9UHG0 476 aa17.36■□□□□ 0.37
UPF3A-206ENST00000480362 DOCK9Q9BZ29 2069 aa17.36■□□□□ 0.37
UPF3A-206ENST00000480362 SGTAO43765 313 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 DNAJC6O75061 913 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 NDUFS2O75306 463 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 CDK14O94921 469 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 AP2A2O94973 939 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 WISP3O95389 354 aaPredicted RBP17.35■□□□□ 0.37
UPF3A-206ENST00000480362 ASMTLO95671 621 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 TOP3BO95985 862 aaKnown RBP17.35■□□□□ 0.37
UPF3A-206ENST00000480362 IGHV4-34P06331 123 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 HNRNPA2B1P22626 353 aaKnown RBP17.35■□□□□ 0.37
UPF3A-206ENST00000480362 CRHR1P34998 444 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 RPA3P35244 121 aaPredicted RBP17.35■□□□□ 0.37
UPF3A-206ENST00000480362 SKIV2L2P42285 1042 aaKnown RBP17.35■□□□□ 0.37
UPF3A-206ENST00000480362 ATP1A2P50993 1020 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 DMWDQ09019 674 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 UGT3A1Q6NUS8 523 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 PAQR3Q6TCH7 311 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 CDHR3Q6ZTQ4 885 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 PLD6Q8N2A8 252 aaKnown RBP17.35■□□□□ 0.37
UPF3A-206ENST00000480362 ANKRD42Q8N9B4 389 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 SIDT2Q8NBJ9 832 aaKnown RBP17.35■□□□□ 0.37
UPF3A-206ENST00000480362 DENND6BQ8NEG7 585 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 MDM1Q8TC05 714 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 LKAAEAR1Q8TD35 194 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 TCP10LQ8TDR4 215 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 BIRC7Q96CA5 298 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 SLC30A3Q99726 388 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 LGR4Q9BXB1 951 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 ZCCHC2Q9C0B9 1178 aaKnown RBP17.35■□□□□ 0.37
UPF3A-206ENST00000480362 OR2AG1Q9H205 316 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 C12orf65Q9H3J6 166 aaKnown RBP17.35■□□□□ 0.37
UPF3A-206ENST00000480362 WDR26Q9H7D7 661 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 EBF2Q9HAK2 575 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.35■□□□□ 0.37
UPF3A-206ENST00000480362 TRMT6Q9UJA5 497 aaKnown RBP17.35■□□□□ 0.37
UPF3A-206ENST00000480362 TMEM98Q9Y2Y6 226 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 OR1A2Q9Y585 309 aa17.35■□□□□ 0.37
UPF3A-206ENST00000480362 OR2AG2A6NM03 316 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 F8W8V4 182 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 FPGTO14772 594 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 VEGFDO43915 354 aa17.34■□□□□ 0.37
UPF3A-206ENST00000480362 GLRA3O75311 464 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms