RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 NME1P15531 152 aaKnown RBP8.97□□□□□ -0.97
VCP-206ENST00000480327 TSHRP16473 764 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 ADRA1DP25100 572 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 NMBRP28336 390 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 CA5AP35218 305 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 RABIFP47224 123 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 PFN3P60673 137 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 PDE1BQ01064 536 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 GUCY2DQ02846 1103 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 DPTQ07507 201 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 CALCOCO2Q13137 446 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 EIF2B5Q13144 721 aaKnown RBP8.97□□□□□ -0.97
VCP-206ENST00000480327 TCEA2Q15560 299 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 CHRNA6Q15825 494 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 ISXQ2M1V0 245 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 BBS9Q3SYG4 887 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 PCID2Q5JVF3 399 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 PERM1Q5SV97 790 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 TSTD2Q5T7W7 516 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 HENMT1Q5T8I9 393 aaKnown RBP8.97□□□□□ -0.97
VCP-206ENST00000480327 ARHGAP40Q5TG30 622 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 KCTD16Q68DU8 428 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 DUPD1Q68J44 220 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 HIBCHQ6NVY1 386 aaPredicted RBP8.97□□□□□ -0.97
VCP-206ENST00000480327 IGF2-ASQ6U949 168 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 ENPP7Q6UWV6 458 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 ZNF765Q7L2R6 523 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 RD3Q7Z3Z2 195 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 ZNF605Q86T29 641 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 MCUQ8NE86 351 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 IFI44Q8TCB0 444 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 SNRNP27Q8WVK2 155 aaKnown RBP8.97□□□□□ -0.97
VCP-206ENST00000480327 ATXN7L3BQ96GX2 97 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 TBATAQ96M53 351 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 DEPDC7Q96QD5 511 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 TRIM56Q9BRZ2 755 aaKnown RBP8.97□□□□□ -0.97
VCP-206ENST00000480327 IL22Q9GZX6 179 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 RAB17Q9H0T7 212 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 WDR26Q9H7D7 661 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 POLR1BQ9H9Y6 1135 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 XAB2Q9HCS7 855 aaKnown RBP8.97□□□□□ -0.97
VCP-206ENST00000480327 PHPT1Q9NRX4 125 aaPredicted RBP8.97□□□□□ -0.97
VCP-206ENST00000480327 RAD18Q9NS91 495 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 KCTD5Q9NXV2 234 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 SATB2Q9UPW6 733 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 TMEM98Q9Y2Y6 226 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 TCAF1Q9Y4C2 921 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 ENTPD2Q9Y5L3 495 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 MAD1L1Q9Y6D9 718 aa8.97□□□□□ -0.97
VCP-206ENST00000480327 TMEM202A6NGA9 273 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 MROH6A6NGR9 719 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 SDR42E2A6NKP2 422 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 AP3B1O00203 1094 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 GAPDHSO14556 408 aaPredicted RBP8.96□□□□□ -0.98
VCP-206ENST00000480327 MTX2O75431 263 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 PRAMEF1O95521 474 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 ASMTLO95671 621 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 RHOXF2BP0C7M4 288 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 MLNP12872 115 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 MC4RP32245 332 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 TRIM23P36406 574 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 HADHAP40939 763 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 POLD2P49005 469 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 CDKN1CP49918 316 aaPredicted RBP8.96□□□□□ -0.98
VCP-206ENST00000480327 ARSDP51689 593 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 PLTPP55058 493 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 TMPRSS3P57727 454 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 DCDC1P59894 354 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 ERVPABLB-1P60509 514 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 YPEL5P62699 121 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 XIAPP98170 497 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 CDK3Q00526 305 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 DHX9Q08211 1270 aaKnown RBP8.96□□□□□ -0.98
VCP-206ENST00000480327 PEX6Q13608 980 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 LY6DQ14210 128 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 NFATC4Q14934 902 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 MORF4L2Q15014 288 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 SKIDA1Q1XH10 827 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 DEFB133Q30KQ1 61 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 MSS51Q4VC12 460 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 ATP13A5Q4VNC0 1218 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 ZRANB3Q5FWF4 1079 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 C3orf38Q5JPI3 329 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 ADAMTSL4Q6UY14 1074 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 MARK2Q7KZI7 788 aaKnown RBP8.96□□□□□ -0.98
VCP-206ENST00000480327 HOOK3Q86VS8 718 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 RBFAQ8N0V3 343 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 AGGF1Q8N302 714 aaeCLIP8.96□□□□□ -0.98
VCP-206ENST00000480327 TRAM1L1Q8N609 369 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 BBOF1Q8ND07 529 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 GDAP1Q8TB36 358 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 MAPK15Q8TD08 544 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 STYXQ8WUJ0 223 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 NAT14Q8WUY8 206 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 PTCD2Q8WV60 388 aaKnown RBP8.96□□□□□ -0.98
VCP-206ENST00000480327 HDAC10Q969S8 669 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 TSACCQ96A04 125 aaPredicted RBP8.96□□□□□ -0.98
VCP-206ENST00000480327 COL26A1Q96A83 441 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 CDKN2AIPNLQ96HQ2 116 aa8.96□□□□□ -0.98
VCP-206ENST00000480327 PLEKHG4BQ96PX9 1271 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms