RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 PIGHQ14442 188 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-214ENST00000477152 NR1D2Q14995 579 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 TCEA2Q15560 299 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 AMZ1Q400G9 498 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 PLEKHA7Q6IQ23 1121 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 ZNF574Q6ZN55 896 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-214ENST00000477152 BEND4Q6ZU67 534 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 ATPAF2Q8N5M1 289 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 OR4D9Q8NGE8 314 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 DHRS1Q96LJ7 313 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 SLC38A3Q99624 504 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 SNRNP25Q9BV90 132 aaKnown RBP7.22□□□□□ -1.25
BRCA1-214ENST00000477152 TEX101Q9BY14 249 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-214ENST00000477152 FGF22Q9HCT0 170 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 TAAR2Q9P1P5 351 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 B4GALT6Q9UBX8 382 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 IL17BQ9UHF5 180 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 PCSK1NQ9UHG2 260 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 AMACRQ9UHK6 382 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 TUBD1Q9UJT1 453 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 PCDHGA3Q9Y5H0 932 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 BZW2Q9Y6E2 419 aaKnown RBP7.22□□□□□ -1.25
BRCA1-214ENST00000477152 A0A1W2PNU3 283 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-214ENST00000477152 TCRBV5S1A1TA0A578 114 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 HMX2A2RU54 273 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 ZNF891A8MT65 544 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-214ENST00000477152 SHOXO15266 292 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 HTRA2O43464 458 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-214ENST00000477152 DUX1O43812 170 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 HEXIM1O94992 359 aaKnown RBP7.22□□□□□ -1.25
BRCA1-214ENST00000477152 HGFP14210 728 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 ADMP35318 185 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 MMP13P45452 471 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 CCR10P46092 362 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 LIMK2P53671 638 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 CDK3Q00526 305 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 B4GALNT1Q00973 533 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 DPTQ07507 201 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 ITKQ08881 620 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 KRT81Q14533 505 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 NCAPHQ15003 741 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 HADHQ16836 314 aaKnown RBP7.22□□□□□ -1.25
BRCA1-214ENST00000477152 DENND2CQ68D51 928 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 BORAQ6PGQ7 559 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 HEATR4Q86WZ0 1026 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 GALNT13Q8IUC8 556 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 NRSN1Q8IZ57 195 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 PLA2G15Q8NCC3 412 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 DTD2Q96FN9 168 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 SCRN2Q96FV2 425 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 COQ10AQ96MF6 247 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 OR2M4Q96R27 311 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 MAGEB5Q9BZ81 275 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 SLC25A18Q9H1K4 315 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 RMI1Q9H9A7 625 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 STARD5Q9NSY2 213 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 GEMIN8Q9NWZ8 242 aaKnown RBP7.22□□□□□ -1.25
BRCA1-214ENST00000477152 SLC39A1Q9NY26 324 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 RCOR3Q9P2K3 495 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-214ENST00000477152 CNOT8Q9UFF9 292 aaKnown RBP7.22□□□□□ -1.25
BRCA1-214ENST00000477152 PNMA8BQ9ULN7 279 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-214ENST00000477152 ZNF451Q9Y4E5 1061 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 TMEM191CA6NGB0 347 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 OR5K4A6NMS3 321 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 TMCO5BA8MYB1 307 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 B4E171 279 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 TRAFD1O14545 582 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-214ENST00000477152 TBX1O43435 398 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 MBD3O95983 291 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 FTLP02792 175 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-214ENST00000477152 PRKCGP05129 697 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 FGF1P05230 155 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 FAM153BP0C7A2 387 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 ITIH1P19827 911 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 MIPP30301 263 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 ANP32AP39687 249 aaKnown RBP7.21□□□□□ -1.26
BRCA1-214ENST00000477152 TSPAN7P41732 249 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 ACTR1BP42025 376 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 ACTR1AP61163 376 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 KLHL30Q0D2K2 578 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 CCDC122Q5T0U0 273 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 TMEM71Q6P5X7 295 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 SLC30A9Q6PML9 568 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 CEACAM20Q6UY09 585 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 ZNF765Q7L2R6 523 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 SLC9B2Q86UD5 537 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 ZFAND4Q86XD8 727 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 MAP7D3Q8IWC1 876 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 NETO2Q8NC67 525 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 EXD1Q8NHP7 514 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 CCHCR1Q8TD31 782 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 TEKT4Q8WW24 435 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 EXTL1Q92935 676 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 PPP1R14AQ96A00 147 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 ZNF653Q96CK0 615 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 AP2M1Q96CW1 435 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 IQCDQ96DY2 449 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 MGME1Q9BQP7 344 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 SSBP4Q9BWG4 385 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms