RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 ASB8Q9H765 288 aa23.68■■□□□ 1.38
CPNE1-223ENST00000475146 PRDM8Q9NQV8 689 aa23.68■■□□□ 1.38
CPNE1-223ENST00000475146 UNC13CQ8NB66 2214 aa23.68■■□□□ 1.38
CPNE1-223ENST00000475146 PMS2P1A4D2B8 440 aa23.67■■□□□ 1.38
CPNE1-223ENST00000475146 A6NCN8 305 aa23.67■■□□□ 1.38
CPNE1-223ENST00000475146 PDZK1P1A8MUH7 402 aa23.67■■□□□ 1.38
CPNE1-223ENST00000475146 E7EVH7 732 aa23.67■■□□□ 1.38
CPNE1-223ENST00000475146 CPNE6O95741 557 aa23.67■■□□□ 1.38
CPNE1-223ENST00000475146 VCLP18206 1134 aa23.67■■□□□ 1.38
CPNE1-223ENST00000475146 CCKBRP32239 447 aa23.67■■□□□ 1.38
CPNE1-223ENST00000475146 FDFT1P37268 417 aa23.67■■□□□ 1.38
CPNE1-223ENST00000475146 NFATC2Q13469 925 aa23.67■■□□□ 1.38
CPNE1-223ENST00000475146 SIX1Q15475 284 aaPredicted RBP23.67■■□□□ 1.38
CPNE1-223ENST00000475146 SEPT7Q16181 437 aaKnown RBP23.67■■□□□ 1.38
CPNE1-223ENST00000475146 CCNG2Q16589 344 aa23.67■■□□□ 1.38
CPNE1-223ENST00000475146 LONRF2Q1L5Z9 754 aa23.67■■□□□ 1.38
CPNE1-223ENST00000475146 PHF19Q5T6S3 580 aa23.67■■□□□ 1.38
CPNE1-223ENST00000475146 PRUNE1Q86TP1 453 aa23.67■■□□□ 1.38
CPNE1-223ENST00000475146 LINC00523Q86TU6 105 aa23.67■■□□□ 1.38
CPNE1-223ENST00000475146 SLC9B2Q86UD5 537 aa23.67■■□□□ 1.38
CPNE1-223ENST00000475146 PIM3Q86V86 326 aa23.67■■□□□ 1.38
CPNE1-223ENST00000475146 RASGEF1AQ8N9B8 481 aa23.67■■□□□ 1.38
CPNE1-223ENST00000475146 FGF11Q92914 225 aa23.67■■□□□ 1.38
CPNE1-223ENST00000475146 ETNK1Q9HBU6 452 aa23.67■■□□□ 1.38
CPNE1-223ENST00000475146 CRLS1Q9UJA2 301 aa23.67■■□□□ 1.38
CPNE1-223ENST00000475146 PCDHGA8Q9Y5G5 932 aa23.67■■□□□ 1.38
CPNE1-223ENST00000475146 KMT2BQ9UMN6 2715 aaPredicted RBP23.67■■□□□ 1.38
CPNE1-223ENST00000475146 KIR2DS5A0A0G2JLQ3 304 aa23.66■■□□□ 1.38
CPNE1-223ENST00000475146 A0A0G2JNG1 304 aa23.66■■□□□ 1.38
CPNE1-223ENST00000475146 OR5K4A6NMS3 321 aa23.66■■□□□ 1.38
CPNE1-223ENST00000475146 KIR2DS3K7RE56 304 aa23.66■■□□□ 1.38
CPNE1-223ENST00000475146 AGRPO00253 132 aa23.66■■□□□ 1.38
CPNE1-223ENST00000475146 CCL22O00626 93 aa23.66■■□□□ 1.38
CPNE1-223ENST00000475146 LDB2O43679 373 aa23.66■■□□□ 1.38
CPNE1-223ENST00000475146 DXOO77932 396 aaKnown RBP23.66■■□□□ 1.38
CPNE1-223ENST00000475146 ETS1P14921 441 aa23.66■■□□□ 1.38
CPNE1-223ENST00000475146 MSH3P20585 1137 aa23.66■■□□□ 1.38
CPNE1-223ENST00000475146 HADHAP40939 763 aa23.66■■□□□ 1.38
CPNE1-223ENST00000475146 POU6F1Q14863 301 aa23.66■■□□□ 1.38
CPNE1-223ENST00000475146 KIR2DS5Q14953 304 aa23.66■■□□□ 1.38
CPNE1-223ENST00000475146 NKAIN2Q5VXU1 208 aa23.66■■□□□ 1.38
CPNE1-223ENST00000475146 TMPRSS9Q7Z410 1059 aa23.66■■□□□ 1.38
CPNE1-223ENST00000475146 SNIP1Q8TAD8 396 aaKnown RBP23.66■■□□□ 1.38
CPNE1-223ENST00000475146 DNAJC1Q96KC8 554 aaKnown RBP23.66■■□□□ 1.38
CPNE1-223ENST00000475146 ZNF578Q96N58 590 aaPredicted RBP23.66■■□□□ 1.38
CPNE1-223ENST00000475146 NUDT22Q9BRQ3 303 aa23.66■■□□□ 1.38
CPNE1-223ENST00000475146 SARS2Q9NP81 518 aaKnown RBP23.66■■□□□ 1.38
CPNE1-223ENST00000475146 RAB6BQ9NRW1 208 aa23.66■■□□□ 1.38
CPNE1-223ENST00000475146 THSD1Q9NS62 852 aa23.66■■□□□ 1.38
CPNE1-223ENST00000475146 ASPMQ8IZT6 3477 aa23.66■■□□□ 1.38
CPNE1-223ENST00000475146 ZNF106Q9H2Y7 1883 aaKnown RBP23.66■■□□□ 1.38
CPNE1-223ENST00000475146 URB1O60287 2271 aaKnown RBP23.65■■□□□ 1.38
CPNE1-223ENST00000475146 IGHV1OR21-1A0A087WYE8 117 aa23.65■■□□□ 1.38
CPNE1-223ENST00000475146 OR2AG2A6NM03 316 aa23.65■■□□□ 1.38
CPNE1-223ENST00000475146 ERI2A8K979 691 aaKnown RBP23.65■■□□□ 1.38
CPNE1-223ENST00000475146 ITGALP20701 1170 aa23.65■■□□□ 1.38
CPNE1-223ENST00000475146 CD1CP29017 333 aa23.65■■□□□ 1.38
CPNE1-223ENST00000475146 CTSCP53634 463 aa23.65■■□□□ 1.38
CPNE1-223ENST00000475146 XIAPP98170 497 aa23.65■■□□□ 1.38
CPNE1-223ENST00000475146 ZFP36L1Q07352 338 aaKnown RBP23.65■■□□□ 1.38
CPNE1-223ENST00000475146 EIF3IQ13347 325 aaKnown RBP23.65■■□□□ 1.38
CPNE1-223ENST00000475146 CLPPQ16740 277 aaPredicted RBP23.65■■□□□ 1.38
CPNE1-223ENST00000475146 CHCHD2P9Q5T1J5 151 aaPredicted RBP23.65■■□□□ 1.38
CPNE1-223ENST00000475146 C19orf48Q6RUI8 117 aa23.65■■□□□ 1.38
CPNE1-223ENST00000475146 PPP1R21Q6ZMI0 780 aa23.65■■□□□ 1.38
CPNE1-223ENST00000475146 DET1Q7L5Y6 550 aa23.65■■□□□ 1.38
CPNE1-223ENST00000475146 RAB11FIP2Q7L804 512 aa23.65■■□□□ 1.38
CPNE1-223ENST00000475146 FBXO39Q8N4B4 442 aa23.65■■□□□ 1.38
CPNE1-223ENST00000475146 DNAAF3Q8N9W5 541 aa23.65■■□□□ 1.38
CPNE1-223ENST00000475146 AVL9Q8NBF6 648 aa23.65■■□□□ 1.38
CPNE1-223ENST00000475146 OR52K1Q8NGK4 314 aa23.65■■□□□ 1.38
CPNE1-223ENST00000475146 SH3KBP1Q96B97 665 aa23.65■■□□□ 1.38
CPNE1-223ENST00000475146 AHCYL2Q96HN2 611 aaKnown RBP23.65■■□□□ 1.38
CPNE1-223ENST00000475146 SEMA6CQ9H3T2 930 aa23.65■■□□□ 1.38
CPNE1-223ENST00000475146 PAK5Q9P286 719 aa23.65■■□□□ 1.38
CPNE1-223ENST00000475146 CPNE7Q9UBL6 633 aa23.65■■□□□ 1.38
CPNE1-223ENST00000475146 ZKSCAN5Q9Y2L8 839 aa23.65■■□□□ 1.38
CPNE1-223ENST00000475146 KIF26BQ2KJY2 2108 aa23.65■■□□□ 1.38
CPNE1-223ENST00000475146 PLD2O14939 933 aa23.64■■□□□ 1.37
CPNE1-223ENST00000475146 TNFSF15O95150 251 aa23.64■■□□□ 1.37
CPNE1-223ENST00000475146 GAS8O95995 478 aa23.64■■□□□ 1.37
CPNE1-223ENST00000475146 PBLDP30039 288 aaPredicted RBP23.64■■□□□ 1.37
CPNE1-223ENST00000475146 ERVPABLB-1P60509 514 aa23.64■■□□□ 1.37
CPNE1-223ENST00000475146 TMEM220Q6QAJ8 160 aa23.64■■□□□ 1.37
CPNE1-223ENST00000475146 LRRC69Q6ZNQ3 347 aa23.64■■□□□ 1.37
CPNE1-223ENST00000475146 GSTA5Q7RTV2 222 aa23.64■■□□□ 1.37
CPNE1-223ENST00000475146 C11orf96Q7Z7L8 435 aa23.64■■□□□ 1.37
CPNE1-223ENST00000475146 SLITRK4Q8IW52 837 aa23.64■■□□□ 1.37
CPNE1-223ENST00000475146 TRIM48Q8IWZ4 208 aa23.64■■□□□ 1.37
CPNE1-223ENST00000475146 GLIS1Q8NBF1 620 aa23.64■■□□□ 1.37
CPNE1-223ENST00000475146 OR10G6Q8NH81 332 aa23.64■■□□□ 1.37
CPNE1-223ENST00000475146 HNRNPLLQ8WVV9 542 aaKnown RBP23.64■■□□□ 1.37
CPNE1-223ENST00000475146 ULK4Q96C45 1275 aa23.64■■□□□ 1.37
CPNE1-223ENST00000475146 C19orf43Q9BQ61 176 aa23.64■■□□□ 1.37
CPNE1-223ENST00000475146 FAM96AQ9H5X1 160 aa23.64■■□□□ 1.37
CPNE1-223ENST00000475146 ASCL3Q9NQ33 180 aa23.64■■□□□ 1.37
CPNE1-223ENST00000475146 LOXL2Q9Y4K0 774 aa23.64■■□□□ 1.37
CPNE1-223ENST00000475146 SLC30A1Q9Y6M5 507 aa23.64■■□□□ 1.37
CPNE1-223ENST00000475146 A0A087WV48 116 aa23.63■■□□□ 1.37
CPNE1-223ENST00000475146 RRP8O43159 456 aaKnown RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms