RNA–Protein interactions for RNA: ENST00000474000.5

COL16A1-210, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-210ENST00000474000 PPP1R12AO14974 1030 aaPredicted RBP11.84□□□□□ -0.51
COL16A1-210ENST00000474000 KMOO15229 486 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 VEGFDO43915 354 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 MTA2O94776 668 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 UBXN7O94888 489 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 CDK14O94921 469 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 NDST3O95803 873 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 C9P02748 559 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 ANKRD34CP0C6C1 535 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 PRKAR1AP10644 381 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 ZNF7P17097 686 aaPredicted RBP11.84□□□□□ -0.51
COL16A1-210ENST00000474000 AMD1P17707 334 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 RPL10P27635 214 aaKnown RBP11.84□□□□□ -0.51
COL16A1-210ENST00000474000 GFERP55789 205 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 DYNLT1P63172 113 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 FOXM1Q08050 763 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 TRIM14Q14142 442 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 UBAP2LQ14157 1087 aaKnown RBP11.84□□□□□ -0.51
COL16A1-210ENST00000474000 SEPT7Q16181 437 aaKnown RBP11.84□□□□□ -0.51
COL16A1-210ENST00000474000 IGFBP7Q16270 282 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 INSCQ1MX18 579 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 PLA2G4EQ3MJ16 856 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 TEX44Q53QW1 395 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 LRRC38Q5VT99 294 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 ABRAXAS1Q6UWZ7 409 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 TMEM26Q6ZUK4 368 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 LRRTM4Q86VH4 590 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 RFX6Q8HWS3 928 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 ZNF547Q8IVP9 402 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 TRIM48Q8IWZ4 208 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 SRPK1Q96SB4 655 aaKnown RBP11.84□□□□□ -0.51
COL16A1-210ENST00000474000 CHP1Q99653 195 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 EPN3Q9H201 632 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 GLOD4Q9HC38 313 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 BPIFA1Q9NP55 256 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 UBP1Q9NZI7 540 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 NFKBIL1Q9UBC1 381 aaPredicted RBP11.84□□□□□ -0.51
COL16A1-210ENST00000474000 TUBD1Q9UJT1 453 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 TMPRSS11EQ9UL52 423 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 SPO11Q9Y5K1 396 aa11.84□□□□□ -0.51
COL16A1-210ENST00000474000 MN1Q10571 1320 aaPredicted RBP11.84□□□□□ -0.51
COL16A1-210ENST00000474000 DOPEY2Q9Y3R5 2298 aa11.83□□□□□ -0.52
COL16A1-210ENST00000474000 PRR19A6NJB7 356 aa11.83□□□□□ -0.52
COL16A1-210ENST00000474000 PDZK1P1A8MUH7 402 aa11.83□□□□□ -0.52
COL16A1-210ENST00000474000 TOX3O15405 576 aaPredicted RBP11.83□□□□□ -0.52
COL16A1-210ENST00000474000 PMPCBO75439 489 aa11.83□□□□□ -0.52
COL16A1-210ENST00000474000 DLGAP3O95886 979 aa11.83□□□□□ -0.52
COL16A1-210ENST00000474000 KRT1P04264 644 aa11.83□□□□□ -0.52
COL16A1-210ENST00000474000 TNNT1P13805 278 aa11.83□□□□□ -0.52
COL16A1-210ENST00000474000 BRAFP15056 766 aa11.83□□□□□ -0.52
COL16A1-210ENST00000474000 IDSP22304 550 aa11.83□□□□□ -0.52
COL16A1-210ENST00000474000 NOP2P46087 812 aaKnown RBP11.83□□□□□ -0.52
COL16A1-210ENST00000474000 LEPRP48357 1165 aaKnown RBP11.83□□□□□ -0.52
COL16A1-210ENST00000474000 DRG2P55039 364 aaKnown RBP11.83□□□□□ -0.52
COL16A1-210ENST00000474000 TMEM115Q12893 351 aaPredicted RBP11.83□□□□□ -0.52
COL16A1-210ENST00000474000 SLC14A2Q15849 920 aa11.83□□□□□ -0.52
COL16A1-210ENST00000474000 ATP13A5Q4VNC0 1218 aa11.83□□□□□ -0.52
COL16A1-210ENST00000474000 KHDC1Q4VXA5 237 aaKnown RBP11.83□□□□□ -0.52
COL16A1-210ENST00000474000 ODF2Q5BJF6 829 aa11.83□□□□□ -0.52
COL16A1-210ENST00000474000 RHOT2Q8IXI1 618 aa11.83□□□□□ -0.52
COL16A1-210ENST00000474000 RHOT1Q8IXI2 618 aa11.83□□□□□ -0.52
COL16A1-210ENST00000474000 ESX1Q8N693 406 aa11.83□□□□□ -0.52
COL16A1-210ENST00000474000 TEKT5Q96M29 485 aa11.83□□□□□ -0.52
COL16A1-210ENST00000474000 CCDC42Q96M95 316 aa11.83□□□□□ -0.52
COL16A1-210ENST00000474000 TGM7Q96PF1 710 aa11.83□□□□□ -0.52
COL16A1-210ENST00000474000 TIMM29Q9BSF4 260 aa11.83□□□□□ -0.52
COL16A1-210ENST00000474000 NHEJ1Q9H9Q4 299 aaPredicted RBP11.83□□□□□ -0.52
COL16A1-210ENST00000474000 SLC40A1Q9NP59 571 aa11.83□□□□□ -0.52
COL16A1-210ENST00000474000 SPTLC3Q9NUV7 552 aa11.83□□□□□ -0.52
COL16A1-210ENST00000474000 SIDT1Q9NXL6 827 aaKnown RBP11.83□□□□□ -0.52
COL16A1-210ENST00000474000 SAE1Q9UBE0 346 aaPredicted RBP11.83□□□□□ -0.52
COL16A1-210ENST00000474000 HYOU1Q9Y4L1 999 aa11.83□□□□□ -0.52
COL16A1-210ENST00000474000 SDK2Q58EX2 2172 aa11.83□□□□□ -0.52
COL16A1-210ENST00000474000 ZFC3H1O60293 1989 aaKnown RBP11.82□□□□□ -0.52
COL16A1-210ENST00000474000 SPENQ96T58 3664 aaKnown RBP11.82□□□□□ -0.52
COL16A1-210ENST00000474000 A0A0A6YYK5 440 aaPredicted RBP11.82□□□□□ -0.52
COL16A1-210ENST00000474000 LOC285095A0A1B0GVY8 99 aa11.82□□□□□ -0.52
COL16A1-210ENST00000474000 OR52A4PA6NMU1 304 aa11.82□□□□□ -0.52
COL16A1-210ENST00000474000 KIF1CO43896 1103 aaKnown RBP11.82□□□□□ -0.52
COL16A1-210ENST00000474000 ZNF28P17035 718 aa11.82□□□□□ -0.52
COL16A1-210ENST00000474000 TCN2P20062 427 aa11.82□□□□□ -0.52
COL16A1-210ENST00000474000 PTPN3P26045 913 aa11.82□□□□□ -0.52
COL16A1-210ENST00000474000 OAS2P29728 719 aaKnown RBP11.82□□□□□ -0.52
COL16A1-210ENST00000474000 HMGCLP35914 325 aa11.82□□□□□ -0.52
COL16A1-210ENST00000474000 STAT5AP42229 794 aa11.82□□□□□ -0.52
COL16A1-210ENST00000474000 SLC1A1P43005 524 aa11.82□□□□□ -0.52
COL16A1-210ENST00000474000 NR2C2P49116 596 aa11.82□□□□□ -0.52
COL16A1-210ENST00000474000 SEPHS1P49903 392 aa11.82□□□□□ -0.52
COL16A1-210ENST00000474000 SH3BP2P78314 561 aa11.82□□□□□ -0.52
COL16A1-210ENST00000474000 MC1RQ01726 317 aa11.82□□□□□ -0.52
COL16A1-210ENST00000474000 CDC20Q12834 499 aa11.82□□□□□ -0.52
COL16A1-210ENST00000474000 MAP7Q14244 749 aa11.82□□□□□ -0.52
COL16A1-210ENST00000474000 IL11RAQ14626 422 aa11.82□□□□□ -0.52
COL16A1-210ENST00000474000 DEFB109BQ30KR1 87 aa11.82□□□□□ -0.52
COL16A1-210ENST00000474000 AGAP9Q5VTM2 703 aa11.82□□□□□ -0.52
COL16A1-210ENST00000474000 C16orf46Q6P387 395 aa11.82□□□□□ -0.52
COL16A1-210ENST00000474000 C6orf15Q6UXA7 325 aaPredicted RBP11.82□□□□□ -0.52
COL16A1-210ENST00000474000 MFSD7Q6UXD7 560 aa11.82□□□□□ -0.52
COL16A1-210ENST00000474000 WASH2PQ6VEQ5 465 aa11.82□□□□□ -0.52
COL16A1-210ENST00000474000 BZW1Q7L1Q6 419 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms