RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 LINGO1Q96FE5 620 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 PDLIM5Q96HC4 596 aaKnown RBP9.28□□□□□ -0.92
VPS52-216ENST00000471309 LRCH3Q96II8 777 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 ATOH8Q96SQ7 321 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 SORT1Q99523 831 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 SLC30A3Q99726 388 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 WRAP53Q9BUR4 548 aaKnown RBP9.28□□□□□ -0.92
VPS52-216ENST00000471309 RIOK2Q9BVS4 552 aaKnown RBP9.28□□□□□ -0.92
VPS52-216ENST00000471309 GATA5Q9BWX5 397 aaPredicted RBP9.28□□□□□ -0.92
VPS52-216ENST00000471309 C20orf27Q9GZN8 174 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 DRC3Q9H069 523 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 ABCG8Q9H221 673 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 ALG9Q9H6U8 611 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 LATS2Q9NRM7 1088 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 GALPQ9UBC7 116 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 HAO1Q9UJM8 370 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 TMPRSS11EQ9UL52 423 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 PRSS21Q9Y6M0 314 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 SYCE1LA8MT33 242 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 IQCF5A8MTL0 148 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 QSOX1O00391 747 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 BTN3A1O00481 513 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 MAGEC1O60732 1142 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 SMIM24O75264 130 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 LYPLA1O75608 230 aaPredicted RBP9.27□□□□□ -0.93
VPS52-216ENST00000471309 DCTN3O75935 186 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 SLC25A14O95258 325 aaPredicted RBP9.27□□□□□ -0.93
VPS52-216ENST00000471309 EGFP01133 1207 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 OR56A5P0C7T3 313 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 TPBGLP0DKB5 382 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 CBSLP0DN79 551 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 C7P10643 843 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 ALOX15P16050 662 aaPredicted RBP9.27□□□□□ -0.93
VPS52-216ENST00000471309 AKT1P31749 480 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 CBSP35520 551 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 TIE1P35590 1138 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 WASP42768 502 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 RGS4P49798 205 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 COPAP53621 1224 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 DPTQ07507 201 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 CCDC15Q0P6D6 951 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 GRSF1Q12849 480 aaKnown RBP eCLIP9.27□□□□□ -0.93
VPS52-216ENST00000471309 CNTN1Q12860 1018 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 STARD3Q14849 445 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 PON2Q15165 354 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 OR4D1Q15615 310 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 TTLL9Q3SXZ7 439 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 LDLRAP1Q5SW96 308 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 AGBL4Q5VU57 503 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 SDE2Q6IQ49 451 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 TRIM67Q6ZTA4 783 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 NLRP8Q86W28 1048 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 SPNS2Q8IVW8 549 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 AADATQ8N5Z0 425 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 ZBTB2Q8N680 514 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 CLDN19Q8N6F1 224 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 OR2T3Q8NH03 318 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 RFWD2Q8NHY2 731 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 STAG3L4Q8TBR4 150 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 LKAAEAR1Q8TD35 194 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 CXorf40AQ8TE69 158 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 EEF1AKMT1Q8WVE0 214 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 BTN2A2Q8WVV5 523 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 GLYATL1Q969I3 302 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 FAM131CQ96AQ9 280 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 L3HYPDHQ96EM0 354 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 DCUN1D1Q96GG9 259 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 RMDN2Q96LZ7 410 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 TMEM237Q96Q45 408 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 TMEM120AQ9BXJ8 343 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 STN1Q9H668 368 aaKnown RBP9.27□□□□□ -0.93
VPS52-216ENST00000471309 ZNF395Q9H8N7 513 aaPredicted RBP9.27□□□□□ -0.93
VPS52-216ENST00000471309 HEBP1Q9NRV9 189 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 SPATS2LQ9NUQ6 558 aaKnown RBP9.27□□□□□ -0.93
VPS52-216ENST00000471309 KCNK4Q9NYG8 393 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 NCKIPSDQ9NZQ3 722 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 LIMD1Q9UGP4 676 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 TMCO1Q9UM00 188 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 DNAJC16Q9Y2G8 782 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 FADS3Q9Y5Q0 445 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 LAMA3Q16787 3333 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 LRRK1Q38SD2 2015 aa9.27□□□□□ -0.93
VPS52-216ENST00000471309 A0A0G2JND7 137 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 NPEPPSL1A6NEC2 478 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 NEMP2A6NFY4 417 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 CCT8L1PA6NM43 557 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 CDC7O00311 574 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 PLK4O00444 970 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 NEMP1O14524 444 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 MID1O15344 667 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 TSPAN6O43657 245 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 KLK8O60259 260 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 MMP20O60882 483 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 RECQL5O94762 991 aaPredicted RBP9.26□□□□□ -0.93
VPS52-216ENST00000471309 KIAA0754O94854 1291 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 SOD1P00441 154 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 FTH1P02794 183 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 ENO3P13929 434 aaPredicted RBP9.26□□□□□ -0.93
VPS52-216ENST00000471309 MTHFD2P13995 350 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 ATP1B2P14415 290 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms