RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 ATP13A5Q4VNC0 1218 aa20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 KHDC1Q4VXA5 237 aaKnown RBP20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 MANEAQ5SRI9 462 aa20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 AGAP9Q5VTM2 703 aa20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 PID1Q7Z2X4 250 aa20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 C11orf96Q7Z7L8 435 aa20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 DAAM2Q86T65 1068 aa20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 TMTC1Q8IUR5 882 aa20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 BRSK1Q8TDC3 778 aa20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 MED8Q96G25 268 aa20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 TEFMQ96QE5 360 aaKnown RBP20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 SPRY4Q9C004 299 aa20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 ARFGAP3Q9NP61 516 aa20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 IL26Q9NPH9 171 aa20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 TFR2Q9UP52 801 aa20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 PCDHA3Q9Y5H8 950 aa20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 MN1Q10571 1320 aaPredicted RBP20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 ANKRD34CP0C6C1 535 aa20.24■□□□□ 0.83
PDLIM4-205ENST00000463615 MPSTP25325 297 aa20.24■□□□□ 0.83
PDLIM4-205ENST00000463615 ZNF75DP51815 510 aa20.24■□□□□ 0.83
PDLIM4-205ENST00000463615 MC2RQ01718 297 aa20.24■□□□□ 0.83
PDLIM4-205ENST00000463615 SRSF6Q13247 344 aaKnown RBP20.24■□□□□ 0.83
PDLIM4-205ENST00000463615 CCDC50Q8IVM0 306 aa20.24■□□□□ 0.83
PDLIM4-205ENST00000463615 ART4Q93070 314 aa20.24■□□□□ 0.83
PDLIM4-205ENST00000463615 NKD1Q969G9 470 aa20.24■□□□□ 0.83
PDLIM4-205ENST00000463615 PMEPA1Q969W9 287 aa20.24■□□□□ 0.83
PDLIM4-205ENST00000463615 FBXO8Q9NRD0 319 aa20.24■□□□□ 0.83
PDLIM4-205ENST00000463615 OCIAD1Q9NX40 245 aa20.24■□□□□ 0.83
PDLIM4-205ENST00000463615 SCHIP1Q9P0W5 487 aaPredicted RBP20.24■□□□□ 0.83
PDLIM4-205ENST00000463615 PCDHGA4Q9Y5G9 962 aa20.24■□□□□ 0.83
PDLIM4-205ENST00000463615 B3GALT1Q9Y5Z6 326 aa20.24■□□□□ 0.83
PDLIM4-205ENST00000463615 RCCD1A6NED2 376 aa20.23■□□□□ 0.83
PDLIM4-205ENST00000463615 AGRPO00253 132 aa20.23■□□□□ 0.83
PDLIM4-205ENST00000463615 SLC4A1P02730 911 aa20.23■□□□□ 0.83
PDLIM4-205ENST00000463615 C9P02748 559 aa20.23■□□□□ 0.83
PDLIM4-205ENST00000463615 SPAM1P38567 509 aa20.23■□□□□ 0.83
PDLIM4-205ENST00000463615 CHRNA4P43681 627 aa20.23■□□□□ 0.83
PDLIM4-205ENST00000463615 TNNT3P45378 269 aaPredicted RBP20.23■□□□□ 0.83
PDLIM4-205ENST00000463615 TMEM115Q12893 351 aaPredicted RBP20.23■□□□□ 0.83
PDLIM4-205ENST00000463615 INSCQ1MX18 579 aa20.23■□□□□ 0.83
PDLIM4-205ENST00000463615 CRTC3Q6UUV7 619 aa20.23■□□□□ 0.83
PDLIM4-205ENST00000463615 TMEM26Q6ZUK4 368 aa20.23■□□□□ 0.83
PDLIM4-205ENST00000463615 PLXDC1Q8IUK5 500 aa20.23■□□□□ 0.83
PDLIM4-205ENST00000463615 RBM12BQ8IXT5 1001 aaKnown RBP20.23■□□□□ 0.83
PDLIM4-205ENST00000463615 ZPBPQ9BS86 351 aa20.23■□□□□ 0.83
PDLIM4-205ENST00000463615 SEMA4CQ9C0C4 833 aa20.23■□□□□ 0.83
PDLIM4-205ENST00000463615 GBA3Q9H227 469 aa20.23■□□□□ 0.83
PDLIM4-205ENST00000463615 BPIFA1Q9NP55 256 aa20.23■□□□□ 0.83
PDLIM4-205ENST00000463615 POT1Q9NUX5 634 aa20.23■□□□□ 0.83
PDLIM4-205ENST00000463615 SLC39A1Q9NY26 324 aa20.23■□□□□ 0.83
PDLIM4-205ENST00000463615 ZNF624Q9P2J8 865 aaPredicted RBP20.23■□□□□ 0.83
PDLIM4-205ENST00000463615 CCDC66A2RUB6 948 aa20.22■□□□□ 0.83
PDLIM4-205ENST00000463615 MTX2O75431 263 aa20.22■□□□□ 0.83
PDLIM4-205ENST00000463615 BRAFP15056 766 aa20.22■□□□□ 0.83
PDLIM4-205ENST00000463615 CTNNA2P26232 953 aa20.22■□□□□ 0.83
PDLIM4-205ENST00000463615 UGT1A3P35503 534 aa20.22■□□□□ 0.83
PDLIM4-205ENST00000463615 SLC19A1P41440 591 aa20.22■□□□□ 0.83
PDLIM4-205ENST00000463615 ATP1A2P50993 1020 aa20.22■□□□□ 0.83
PDLIM4-205ENST00000463615 DMPKQ09013 629 aa20.22■□□□□ 0.83
PDLIM4-205ENST00000463615 LY6DQ14210 128 aa20.22■□□□□ 0.83
PDLIM4-205ENST00000463615 DCAF12Q5T6F0 453 aa20.22■□□□□ 0.83
PDLIM4-205ENST00000463615 DDHD1Q8NEL9 900 aa20.22■□□□□ 0.83
PDLIM4-205ENST00000463615 NCSTNQ92542 709 aa20.22■□□□□ 0.83
PDLIM4-205ENST00000463615 HAUS1Q96CS2 278 aa20.22■□□□□ 0.83
PDLIM4-205ENST00000463615 C19orf43Q9BQ61 176 aa20.22■□□□□ 0.83
PDLIM4-205ENST00000463615 TBC1D10AQ9BXI6 508 aa20.22■□□□□ 0.83
PDLIM4-205ENST00000463615 HEMGNQ9BXL5 484 aa20.22■□□□□ 0.83
PDLIM4-205ENST00000463615 OSGEPL1Q9H4B0 414 aa20.22■□□□□ 0.83
PDLIM4-205ENST00000463615 SMOXQ9NWM0 555 aa20.22■□□□□ 0.83
PDLIM4-205ENST00000463615 RSPH14Q9UHP6 348 aa20.22■□□□□ 0.83
PDLIM4-205ENST00000463615 REXO2Q9Y3B8 237 aaKnown RBP20.22■□□□□ 0.83
PDLIM4-205ENST00000463615 DNMT3AQ9Y6K1 912 aaPredicted RBP20.22■□□□□ 0.83
PDLIM4-205ENST00000463615 PIEZO2Q9H5I5 2752 aa20.22■□□□□ 0.83
PDLIM4-205ENST00000463615 SOWAHDA6NJG2 315 aa20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 EFCAB7A8K855 629 aa20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 GAPDHSO14556 408 aaPredicted RBP20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 TOX3O15405 576 aaPredicted RBP20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 PJA2O43164 708 aa20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 ZNF189O75820 626 aaPredicted RBP20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 ANXA9O76027 345 aa20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 WT1P19544 449 aaPredicted RBP20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 IDSP22304 550 aa20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 RBL1P28749 1068 aa20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 GEMP55040 296 aa20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 LINC00303Q3SY05 128 aa20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 LDLRAP1Q5SW96 308 aa20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 ITPRIPL1Q6GPH6 555 aa20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 RANBP10Q6VN20 620 aa20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 GLT6D1Q7Z4J2 308 aa20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 ZNF605Q86T29 641 aa20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 VASH2Q86V25 355 aa20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 SLC25A41Q8N5S1 370 aa20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 ZSCAN1Q8NBB4 408 aa20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 IPMKQ8NFU5 416 aa20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 ACTL9Q8TC94 416 aa20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 GORASP1Q9BQQ3 440 aa20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 OSBPL8Q9BZF1 889 aa20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 ZCCHC2Q9C0B9 1178 aaKnown RBP20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 OGFRQ9NZT2 677 aa20.21■□□□□ 0.83
PDLIM4-205ENST00000463615 GLYATL1P3A0A0U1RQE8 302 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms