RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 KIAA1614Q5VZ46 1190 aa18.68■□□□□ 0.58
VARS-220ENST00000461874 ZDHHC20Q5W0Z9 365 aa18.68■□□□□ 0.58
VARS-220ENST00000461874 RAD9BQ6WBX8 426 aa18.68■□□□□ 0.58
VARS-220ENST00000461874 ZNF547Q8IVP9 402 aa18.68■□□□□ 0.58
VARS-220ENST00000461874 TIMM29Q9BSF4 260 aa18.68■□□□□ 0.58
VARS-220ENST00000461874 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.68■□□□□ 0.58
VARS-220ENST00000461874 OSBPL8Q9BZF1 889 aa18.68■□□□□ 0.58
VARS-220ENST00000461874 ZMYND15Q9H091 742 aa18.68■□□□□ 0.58
VARS-220ENST00000461874 OSGEPL1Q9H4B0 414 aa18.68■□□□□ 0.58
VARS-220ENST00000461874 IL17CQ9P0M4 197 aa18.68■□□□□ 0.58
VARS-220ENST00000461874 SCHIP1Q9P0W5 487 aaPredicted RBP18.68■□□□□ 0.58
VARS-220ENST00000461874 RSPH14Q9UHP6 348 aa18.68■□□□□ 0.58
VARS-220ENST00000461874 PCDHB11Q9Y5F2 797 aa18.68■□□□□ 0.58
VARS-220ENST00000461874 CFAP46Q8IYW2 2715 aa18.68■□□□□ 0.58
VARS-220ENST00000461874 XRCC1P18887 633 aaPredicted RBP18.67■□□□□ 0.58
VARS-220ENST00000461874 CTNNA2P26232 953 aa18.67■□□□□ 0.58
VARS-220ENST00000461874 PTPN7P35236 360 aa18.67■□□□□ 0.58
VARS-220ENST00000461874 ARSDP51689 593 aa18.67■□□□□ 0.58
VARS-220ENST00000461874 NAP1L1P55209 391 aaKnown RBP18.67■□□□□ 0.58
VARS-220ENST00000461874 INSCQ1MX18 579 aa18.67■□□□□ 0.58
VARS-220ENST00000461874 PLA2G4EQ3MJ16 856 aa18.67■□□□□ 0.58
VARS-220ENST00000461874 ARHGAP22Q7Z5H3 698 aa18.67■□□□□ 0.58
VARS-220ENST00000461874 CCDC112Q8NEF3 446 aa18.67■□□□□ 0.58
VARS-220ENST00000461874 ACTL9Q8TC94 416 aa18.67■□□□□ 0.58
VARS-220ENST00000461874 BLOC1S5Q8TDH9 187 aa18.67■□□□□ 0.58
VARS-220ENST00000461874 NCSTNQ92542 709 aa18.67■□□□□ 0.58
VARS-220ENST00000461874 PMEPA1Q969W9 287 aa18.67■□□□□ 0.58
VARS-220ENST00000461874 LACRTQ9GZZ8 138 aa18.67■□□□□ 0.58
VARS-220ENST00000461874 EPB41L1Q9H4G0 881 aa18.67■□□□□ 0.58
VARS-220ENST00000461874 UCK1Q9HA47 277 aa18.67■□□□□ 0.58
VARS-220ENST00000461874 OCIAD1Q9NX40 245 aa18.67■□□□□ 0.58
VARS-220ENST00000461874 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.67■□□□□ 0.58
VARS-220ENST00000461874 DNAJC16Q9Y2G8 782 aa18.67■□□□□ 0.58
VARS-220ENST00000461874 CCDC66A2RUB6 948 aa18.66■□□□□ 0.58
VARS-220ENST00000461874 LILRA5A6NI73 299 aa18.66■□□□□ 0.58
VARS-220ENST00000461874 B4E171 279 aa18.66■□□□□ 0.58
VARS-220ENST00000461874 PJA2O43164 708 aa18.66■□□□□ 0.58
VARS-220ENST00000461874 SPAM1P38567 509 aa18.66■□□□□ 0.58
VARS-220ENST00000461874 TSPAN7P41732 249 aa18.66■□□□□ 0.58
VARS-220ENST00000461874 OTUD4Q01804 1114 aaKnown RBP18.66■□□□□ 0.58
VARS-220ENST00000461874 TMEM115Q12893 351 aaPredicted RBP18.66■□□□□ 0.58
VARS-220ENST00000461874 SNAP47Q5SQN1 464 aa18.66■□□□□ 0.58
VARS-220ENST00000461874 MANEAQ5SRI9 462 aa18.66■□□□□ 0.58
VARS-220ENST00000461874 GLT6D1Q7Z4J2 308 aa18.66■□□□□ 0.58
VARS-220ENST00000461874 ZNF843Q8N446 348 aa18.66■□□□□ 0.58
VARS-220ENST00000461874 GDAP1Q8TB36 358 aa18.66■□□□□ 0.58
VARS-220ENST00000461874 BRSK1Q8TDC3 778 aa18.66■□□□□ 0.58
VARS-220ENST00000461874 ART4Q93070 314 aa18.66■□□□□ 0.58
VARS-220ENST00000461874 FERMT1Q9BQL6 677 aa18.66■□□□□ 0.58
VARS-220ENST00000461874 GORASP1Q9BQQ3 440 aa18.66■□□□□ 0.58
VARS-220ENST00000461874 DDA1Q9BW61 102 aa18.66■□□□□ 0.58
VARS-220ENST00000461874 TBC1D10AQ9BXI6 508 aa18.66■□□□□ 0.58
VARS-220ENST00000461874 FSD1LQ9BXM9 530 aa18.66■□□□□ 0.58
VARS-220ENST00000461874 GBA3Q9H227 469 aa18.66■□□□□ 0.58
VARS-220ENST00000461874 SLC39A1Q9NY26 324 aa18.66■□□□□ 0.58
VARS-220ENST00000461874 ZNF624Q9P2J8 865 aaPredicted RBP18.66■□□□□ 0.58
VARS-220ENST00000461874 B3GALT1Q9Y5Z6 326 aa18.66■□□□□ 0.58
VARS-220ENST00000461874 EFCAB7A8K855 629 aa18.65■□□□□ 0.58
VARS-220ENST00000461874 A8MU76 341 aa18.65■□□□□ 0.58
VARS-220ENST00000461874 STMND1H3BQB6 276 aa18.65■□□□□ 0.58
VARS-220ENST00000461874 BUD23O43709 281 aaKnown RBP18.65■□□□□ 0.58
VARS-220ENST00000461874 ANXA9O76027 345 aa18.65■□□□□ 0.58
VARS-220ENST00000461874 AGTP01019 485 aa18.65■□□□□ 0.58
VARS-220ENST00000461874 SLC19A1P41440 591 aa18.65■□□□□ 0.58
VARS-220ENST00000461874 MAPK9P45984 424 aa18.65■□□□□ 0.58
VARS-220ENST00000461874 GEMP55040 296 aa18.65■□□□□ 0.58
VARS-220ENST00000461874 RWDD2BP57060 319 aa18.65■□□□□ 0.58
VARS-220ENST00000461874 CHRNA6Q15825 494 aa18.65■□□□□ 0.58
VARS-220ENST00000461874 ITPRIPL1Q6GPH6 555 aa18.65■□□□□ 0.58
VARS-220ENST00000461874 ABRAXAS1Q6UWZ7 409 aa18.65■□□□□ 0.58
VARS-220ENST00000461874 FAM151BQ6UXP7 276 aa18.65■□□□□ 0.58
VARS-220ENST00000461874 WASH2PQ6VEQ5 465 aa18.65■□□□□ 0.58
VARS-220ENST00000461874 C11orf96Q7Z7L8 435 aa18.65■□□□□ 0.58
VARS-220ENST00000461874 VASH2Q86V25 355 aa18.65■□□□□ 0.58
VARS-220ENST00000461874 FAM129CQ86XR2 697 aa18.65■□□□□ 0.58
VARS-220ENST00000461874 CDKL3Q8IVW4 592 aaPredicted RBP18.65■□□□□ 0.58
VARS-220ENST00000461874 BMPERQ8N8U9 685 aa18.65■□□□□ 0.58
VARS-220ENST00000461874 LRRC57Q8N9N7 239 aa18.65■□□□□ 0.58
VARS-220ENST00000461874 ACRBPQ8NEB7 543 aa18.65■□□□□ 0.58
VARS-220ENST00000461874 ALG3Q92685 438 aa18.65■□□□□ 0.58
VARS-220ENST00000461874 SGF29Q96ES7 293 aa18.65■□□□□ 0.58
VARS-220ENST00000461874 ASPSCR1Q9BZE9 553 aa18.65■□□□□ 0.58
VARS-220ENST00000461874 WASH6PQ9NQA3 447 aa18.65■□□□□ 0.58
VARS-220ENST00000461874 PKP3Q9Y446 797 aa18.65■□□□□ 0.58
VARS-220ENST00000461874 HELZ2Q9BYK8 2649 aaKnown RBP18.64■□□□□ 0.57
VARS-220ENST00000461874 PIEZO2Q9H5I5 2752 aa18.64■□□□□ 0.57
VARS-220ENST00000461874 GLYATL1P3A0A0U1RQE8 302 aa18.64■□□□□ 0.57
VARS-220ENST00000461874 GRID2IPA4D2P6 1211 aa18.64■□□□□ 0.57
VARS-220ENST00000461874 PDZK1P1A8MUH7 402 aa18.64■□□□□ 0.57
VARS-220ENST00000461874 GAPDHSO14556 408 aaPredicted RBP18.64■□□□□ 0.57
VARS-220ENST00000461874 UGT1A9O60656 530 aa18.64■□□□□ 0.57
VARS-220ENST00000461874 PPFIA2O75334 1257 aa18.64■□□□□ 0.57
VARS-220ENST00000461874 VIPP01282 170 aa18.64■□□□□ 0.57
VARS-220ENST00000461874 BRAFP15056 766 aa18.64■□□□□ 0.57
VARS-220ENST00000461874 UGT1A6P19224 532 aa18.64■□□□□ 0.57
VARS-220ENST00000461874 UGT1A1P22309 533 aa18.64■□□□□ 0.57
VARS-220ENST00000461874 UGT1A4P22310 534 aa18.64■□□□□ 0.57
VARS-220ENST00000461874 UGT1A3P35503 534 aa18.64■□□□□ 0.57
VARS-220ENST00000461874 VAV2P52735 878 aa18.64■□□□□ 0.57
VARS-220ENST00000461874 RAB15P59190 212 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms