RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 FAM90A26D6RGX4 464 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 H3BNX3 289 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 J3KR12 359 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 DVL1O14640 695 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 ANKRD28O15084 1053 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 TSPAN1O60635 241 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 KCNJ13O60928 360 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 TBX10O75333 385 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 GLUD1P00367 558 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 PRSS2P07478 247 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 KCNA5P22460 613 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 CPT2P23786 658 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 EEF1B2P24534 225 aaKnown RBP3□□□□□ -1.93
HDAC6-212ENST00000461608 USP8P40818 1118 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 APOBEC1P41238 236 aaKnown RBP3□□□□□ -1.93
HDAC6-212ENST00000461608 NR4A2P43354 598 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 GLUD2P49448 558 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 COMPP49747 757 aaPredicted RBP3□□□□□ -1.93
HDAC6-212ENST00000461608 SNRPEP62304 92 aaKnown RBP3□□□□□ -1.93
HDAC6-212ENST00000461608 ROR1Q01973 937 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 EGR4Q05215 589 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 TFCP2Q12800 502 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 TRAF1Q13077 416 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 IL11RAQ14626 422 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 SNAPC1Q16533 368 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 SYT16Q17RD7 645 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 FAM98BQ52LJ0 330 aaKnown RBP3□□□□□ -1.93
HDAC6-212ENST00000461608 ZNF628Q5EBL2 1059 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 KCNT1Q5JUK3 1230 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 FAM69BQ5VUD6 431 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 NSUN5P2Q63ZY6 315 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 HIST2H2BCQ6DN03 193 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 HIST2H2BDQ6DRA6 164 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 C11orf87Q6NUJ2 197 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 RBPMS2Q6ZRY4 209 aaKnown RBP3□□□□□ -1.93
HDAC6-212ENST00000461608 LDB1Q86U70 411 aaPredicted RBP3□□□□□ -1.93
HDAC6-212ENST00000461608 CEP57Q86XR8 500 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 BEST3Q8N1M1 668 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 NRACQ8N912 160 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 EXD1Q8NHP7 514 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 FAM162AQ96A26 154 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 PTERQ96BW5 349 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 MS4A10Q96PG2 267 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 DDOQ99489 341 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 SPRTNQ9H040 489 aaPredicted RBP3□□□□□ -1.93
HDAC6-212ENST00000461608 TAS2R14Q9NYV8 317 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 SELENONQ9NZV5 590 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 CRNNQ9UBG3 495 aaPredicted RBP3□□□□□ -1.93
HDAC6-212ENST00000461608 TSPYL4Q9UJ04 414 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 TINAGQ9UJW2 476 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 ANAPC5Q9UJX4 755 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 PTPRCP08575 1304 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 CACNA1IQ9P0X4 2223 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 WDR91A4D1P6 747 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 MYMKA6NI61 221 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 TSPY2A6NKD2 308 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 ANKRD66B4E2M5 251 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 INAFM1C9JVW0 142 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 SOCS6O14544 535 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 PSMA7O14818 248 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 WDR46O15213 610 aaKnown RBP2.99□□□□□ -1.93
HDAC6-212ENST00000461608 SLC16A5O15375 505 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 RECQL5O94762 991 aaPredicted RBP2.99□□□□□ -1.93
HDAC6-212ENST00000461608 HSPA4LO95757 839 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 LINGO3P0C6S8 592 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 TSPY3P0CV98 308 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 TSPY8P0CW00 308 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 DAOP14920 347 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 ZNF23P17027 643 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 ERCC2P18074 760 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 CCKBRP32239 447 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 SUOXP51687 545 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 ZNF75DP51815 510 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 KRT83P78385 493 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 TSPY1Q01534 308 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 COG2Q14746 738 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 PLCB4Q15147 1175 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 OASLQ15646 514 aaKnown RBP2.99□□□□□ -1.93
HDAC6-212ENST00000461608 KRTCAP3Q53RY4 240 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 IGSF11Q5DX21 431 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 KRBOX4Q5JUW0 171 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 HECTD3Q5T447 861 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 TMEM198Q66K66 360 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 TRNP1Q6NT89 227 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 RGMBQ6NW40 437 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 C11orf88Q6PI97 169 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 PET117Q6UWS5 81 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 PLEKHM3Q6ZWE6 761 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 ERN2Q76MJ5 926 aaKnown RBP2.99□□□□□ -1.93
HDAC6-212ENST00000461608 C1QL2Q7Z5L3 287 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 CAMKMTQ7Z624 323 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 GALNT13Q8IUC8 556 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 FOXRED2Q8IWF2 684 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 CHERPQ8IWX8 916 aaKnown RBP2.99□□□□□ -1.93
HDAC6-212ENST00000461608 PRR26Q8N8Z3 221 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 Q8N9P0 234 aaPredicted RBP2.99□□□□□ -1.93
HDAC6-212ENST00000461608 PPFIBP2Q8ND30 876 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 VPS33AQ96AX1 596 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 ERLEC1Q96DZ1 483 aa2.99□□□□□ -1.93
HDAC6-212ENST00000461608 PHF21BQ96EK2 531 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms