RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 SLC22A2O15244 555 aa15.73■□□□□ 0.11
SNX17-204ENST00000453453 KLF8O95600 359 aaPredicted RBP15.73■□□□□ 0.11
SNX17-204ENST00000453453 SERPINE1P05121 402 aa15.73■□□□□ 0.11
SNX17-204ENST00000453453 ERVK-10P10266 1014 aa15.73■□□□□ 0.11
SNX17-204ENST00000453453 IMPDH2P12268 514 aa15.73■□□□□ 0.11
SNX17-204ENST00000453453 SUOXP51687 545 aa15.73■□□□□ 0.11
SNX17-204ENST00000453453 ZNF140P52738 457 aaPredicted RBP15.73■□□□□ 0.11
SNX17-204ENST00000453453 CAMK2GQ13555 558 aaPredicted RBP15.73■□□□□ 0.11
SNX17-204ENST00000453453 ARHGEF7Q14155 803 aa15.73■□□□□ 0.11
SNX17-204ENST00000453453 UGP2Q16851 508 aa15.73■□□□□ 0.11
SNX17-204ENST00000453453 ZFP1Q6P2D0 407 aa15.73■□□□□ 0.11
SNX17-204ENST00000453453 KLC3Q6P597 504 aa15.73■□□□□ 0.11
SNX17-204ENST00000453453 LYSMD3Q7Z3D4 306 aa15.73■□□□□ 0.11
SNX17-204ENST00000453453 OR6P1Q8NGX9 317 aa15.73■□□□□ 0.11
SNX17-204ENST00000453453 PPP4R1Q8TF05 950 aa15.73■□□□□ 0.11
SNX17-204ENST00000453453 VOPP1Q96AW1 172 aa15.73■□□□□ 0.11
SNX17-204ENST00000453453 SHDQ96IW2 340 aa15.73■□□□□ 0.11
SNX17-204ENST00000453453 DNAJC1Q96KC8 554 aaKnown RBP15.73■□□□□ 0.11
SNX17-204ENST00000453453 LYSMD1Q96S90 227 aa15.73■□□□□ 0.11
SNX17-204ENST00000453453 GABRG3Q99928 467 aa15.73■□□□□ 0.11
SNX17-204ENST00000453453 ZNF696Q9H7X3 374 aa15.73■□□□□ 0.11
SNX17-204ENST00000453453 POLR3BQ9NW08 1133 aaPredicted RBP15.73■□□□□ 0.11
SNX17-204ENST00000453453 FBXL21Q9UKT6 434 aa15.73■□□□□ 0.11
SNX17-204ENST00000453453 PSMD13Q9UNM6 376 aa15.73■□□□□ 0.11
SNX17-204ENST00000453453 F5P12259 2224 aa15.73■□□□□ 0.11
SNX17-204ENST00000453453 C15orf38-AP3S2A0A0A6YYH1 394 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 SLC7A4O43246 635 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 ITGA2BP08514 1039 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 SMIM18P0DKX4 95 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 PSMD8P48556 350 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 ACVR1Q04771 509 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 EOGTQ5NDL2 527 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 TEDDM1Q5T9Z0 273 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 METTL21CQ5VZV1 264 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 CES4AQ5XG92 561 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 FBXL19Q6PCT2 694 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 ARPINQ7Z6K5 226 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 KBTBD6Q86V97 674 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 MMAAQ8IVH4 418 aaKnown RBP15.72■□□□□ 0.11
SNX17-204ENST00000453453 UNC5BQ8IZJ1 945 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 TTC30BQ8N4P2 665 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 IL17RCQ8NAC3 791 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 OR4K2Q8NGD2 314 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 OR13J1Q8NGT2 312 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 PPP1R14CQ8TAE6 165 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 SMIM14Q96QK8 99 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 C19orf43Q9BQ61 176 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 RTKNQ9BST9 563 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 MECRQ9BV79 373 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 IARS2Q9NSE4 1012 aaKnown RBP15.72■□□□□ 0.11
SNX17-204ENST00000453453 CA14Q9ULX7 337 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 NDRG2Q9UN36 371 aaKnown RBP15.72■□□□□ 0.11
SNX17-204ENST00000453453 DTNAQ9Y4J8 743 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 KCTD3Q9Y597 815 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 A0A1B0GVG6 124 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 ARHGAP10A1A4S6 786 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 NPIPB15A6NHN6 443 aaPredicted RBP15.72■□□□□ 0.11
SNX17-204ENST00000453453 AURKAO14965 403 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 ADH1BP00325 375 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 HOXB2P14652 356 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 TIMP2P16035 220 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 ZNF30P17039 623 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 VIPR1P32241 457 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 HMGCLP35914 325 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 RANBP1P43487 201 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 HK2P52789 917 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 AQP4P55087 323 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 MTTPP55157 894 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 UBAP2LQ14157 1087 aaKnown RBP15.72■□□□□ 0.11
SNX17-204ENST00000453453 LRRC32Q14392 662 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 POM121L1PQ3SYA9 428 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 IER5LQ5T953 404 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 ZNF776Q68DI1 518 aaPredicted RBP15.72■□□□□ 0.11
SNX17-204ENST00000453453 PARS2Q7L3T8 475 aaKnown RBP15.72■□□□□ 0.11
SNX17-204ENST00000453453 FBXW8Q8N3Y1 598 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 TXNDC5Q8NBS9 432 aaKnown RBP15.72■□□□□ 0.11
SNX17-204ENST00000453453 OR13C4Q8NGS5 318 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 SLC26A7Q8TE54 656 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 HDAC10Q969S8 669 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 PBXIP1Q96AQ6 731 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 CATSPER2Q96P56 530 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 SERPINI1Q99574 410 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 RSPH9Q9H1X1 276 aaPredicted RBP15.72■□□□□ 0.11
SNX17-204ENST00000453453 MFSD1Q9H3U5 465 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 B4GALT6Q9UBX8 382 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 DCDC2Q9UHG0 476 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 ADAMTS6Q9UKP5 1117 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 DMTF1Q9Y222 760 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 POMPQ9Y244 141 aa15.72■□□□□ 0.11
SNX17-204ENST00000453453 ATG2BQ96BY7 2078 aa15.71■□□□□ 0.11
SNX17-204ENST00000453453 C19orf67A6NJJ6 358 aa15.71■□□□□ 0.11
SNX17-204ENST00000453453 CXorf49A8MYA2 514 aaPredicted RBP15.71■□□□□ 0.11
SNX17-204ENST00000453453 TNFAIP8O95379 198 aa15.71■□□□□ 0.11
SNX17-204ENST00000453453 FGF3P11487 239 aaPredicted RBP15.71■□□□□ 0.11
SNX17-204ENST00000453453 ARCN1P48444 511 aaKnown RBP15.71■□□□□ 0.11
SNX17-204ENST00000453453 SLC1A6P48664 564 aa15.71■□□□□ 0.11
SNX17-204ENST00000453453 ELP6Q0PNE2 266 aa15.71■□□□□ 0.11
SNX17-204ENST00000453453 CCINQ13939 588 aa15.71■□□□□ 0.11
SNX17-204ENST00000453453 TRIP10Q15642 601 aa15.71■□□□□ 0.11
SNX17-204ENST00000453453 SMAD1Q15797 465 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms