RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 SLC25A41Q8N5S1 370 aa12.3□□□□□ -0.44
CPSF4-208ENST00000452047 BMPERQ8N8U9 685 aa12.3□□□□□ -0.44
CPSF4-208ENST00000452047 AGBL5Q8NDL9 886 aa12.3□□□□□ -0.44
CPSF4-208ENST00000452047 ACRBPQ8NEB7 543 aa12.3□□□□□ -0.44
CPSF4-208ENST00000452047 IPMKQ8NFU5 416 aa12.3□□□□□ -0.44
CPSF4-208ENST00000452047 ACTL9Q8TC94 416 aa12.3□□□□□ -0.44
CPSF4-208ENST00000452047 DTX3LQ8TDB6 740 aa12.3□□□□□ -0.44
CPSF4-208ENST00000452047 ALG3Q92685 438 aa12.3□□□□□ -0.44
CPSF4-208ENST00000452047 OSBPL8Q9BZF1 889 aa12.3□□□□□ -0.44
CPSF4-208ENST00000452047 GBA3Q9H227 469 aa12.3□□□□□ -0.44
CPSF4-208ENST00000452047 OSGEPL1Q9H4B0 414 aa12.3□□□□□ -0.44
CPSF4-208ENST00000452047 STN1Q9H668 368 aaKnown RBP12.3□□□□□ -0.44
CPSF4-208ENST00000452047 C10orf88Q9H8K7 445 aa12.3□□□□□ -0.44
CPSF4-208ENST00000452047 HACD3Q9P035 362 aa12.3□□□□□ -0.44
CPSF4-208ENST00000452047 SCHIP1Q9P0W5 487 aaPredicted RBP12.3□□□□□ -0.44
CPSF4-208ENST00000452047 CPNE7Q9UBL6 633 aa12.3□□□□□ -0.44
CPSF4-208ENST00000452047 RSPH14Q9UHP6 348 aa12.3□□□□□ -0.44
CPSF4-208ENST00000452047 PCDHGA3Q9Y5H0 932 aa12.3□□□□□ -0.44
CPSF4-208ENST00000452047 COL6A6A6NMZ7 2263 aa12.3□□□□□ -0.44
CPSF4-208ENST00000452047 CCDC66A2RUB6 948 aa12.29□□□□□ -0.44
CPSF4-208ENST00000452047 GRID2IPA4D2P6 1211 aa12.29□□□□□ -0.44
CPSF4-208ENST00000452047 LILRA5A6NI73 299 aa12.29□□□□□ -0.44
CPSF4-208ENST00000452047 H7C0C1 242 aa12.29□□□□□ -0.44
CPSF4-208ENST00000452047 GPR39O43194 453 aa12.29□□□□□ -0.44
CPSF4-208ENST00000452047 CDK14O94921 469 aa12.29□□□□□ -0.44
CPSF4-208ENST00000452047 IPO7O95373 1038 aaKnown RBP12.29□□□□□ -0.44
CPSF4-208ENST00000452047 ZNF7P17097 686 aaPredicted RBP12.29□□□□□ -0.44
CPSF4-208ENST00000452047 XRCC1P18887 633 aaPredicted RBP12.29□□□□□ -0.44
CPSF4-208ENST00000452047 CA5AP35218 305 aa12.29□□□□□ -0.44
CPSF4-208ENST00000452047 SPAM1P38567 509 aa12.29□□□□□ -0.44
CPSF4-208ENST00000452047 TNNT3P45378 269 aaPredicted RBP12.29□□□□□ -0.44
CPSF4-208ENST00000452047 ATP5OP48047 213 aa12.29□□□□□ -0.44
CPSF4-208ENST00000452047 VAV2P52735 878 aa12.29□□□□□ -0.44
CPSF4-208ENST00000452047 TMEM115Q12893 351 aaPredicted RBP12.29□□□□□ -0.44
CPSF4-208ENST00000452047 INSCQ1MX18 579 aa12.29□□□□□ -0.44
CPSF4-208ENST00000452047 PLA2G4EQ3MJ16 856 aa12.29□□□□□ -0.44
CPSF4-208ENST00000452047 TMEM164Q5U3C3 297 aa12.29□□□□□ -0.44
CPSF4-208ENST00000452047 KIAA1614Q5VZ46 1190 aa12.29□□□□□ -0.44
CPSF4-208ENST00000452047 ZDHHC20Q5W0Z9 365 aa12.29□□□□□ -0.44
CPSF4-208ENST00000452047 GLT6D1Q7Z4J2 308 aa12.29□□□□□ -0.44
CPSF4-208ENST00000452047 ARHGAP22Q7Z5H3 698 aa12.29□□□□□ -0.44
CPSF4-208ENST00000452047 AVL9Q8NBF6 648 aa12.29□□□□□ -0.44
CPSF4-208ENST00000452047 BLOC1S5Q8TDH9 187 aa12.29□□□□□ -0.44
CPSF4-208ENST00000452047 SH3KBP1Q96B97 665 aa12.29□□□□□ -0.44
CPSF4-208ENST00000452047 AHCYL2Q96HN2 611 aaKnown RBP12.29□□□□□ -0.44
CPSF4-208ENST00000452047 TAAR9Q96RI9 348 aa12.29□□□□□ -0.44
CPSF4-208ENST00000452047 TBC1D10AQ9BXI6 508 aa12.29□□□□□ -0.44
CPSF4-208ENST00000452047 UCK1Q9HA47 277 aa12.29□□□□□ -0.44
CPSF4-208ENST00000452047 TENM4Q6N022 2769 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 B4E171 279 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 STMND1H3BQB6 276 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 BUD23O43709 281 aaKnown RBP12.28□□□□□ -0.44
CPSF4-208ENST00000452047 PPFIA2O75334 1257 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 AGTP01019 485 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 BRAFP15056 766 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 CSTF2P33240 577 aaKnown RBP eCLIP12.28□□□□□ -0.44
CPSF4-208ENST00000452047 ADRA1AP35348 466 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 SLC19A1P41440 591 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 TSPAN7P41732 249 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 GEMP55040 296 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 RWDD2BP57060 319 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 CHRNA6Q15825 494 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 TAF1BQ53T94 588 aaPredicted RBP12.28□□□□□ -0.44
CPSF4-208ENST00000452047 CCDC181Q5TID7 509 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 AADACL2Q6P093 401 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 ABRAXAS1Q6UWZ7 409 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 FAM151BQ6UXP7 276 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 WASH2PQ6VEQ5 465 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 RANBP10Q6VN20 620 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 VASH2Q86V25 355 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 CDKL3Q8IVW4 592 aaPredicted RBP12.28□□□□□ -0.44
CPSF4-208ENST00000452047 ZNF843Q8N446 348 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 DDHD1Q8NEL9 900 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 ART4Q93070 314 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 DDA1Q9BW61 102 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 FSD1LQ9BXM9 530 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.28□□□□□ -0.44
CPSF4-208ENST00000452047 ZMYND15Q9H091 742 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 EPB41L1Q9H4G0 881 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 WASH6PQ9NQA3 447 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 SMOXQ9NWM0 555 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 OCIAD1Q9NX40 245 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.28□□□□□ -0.44
CPSF4-208ENST00000452047 OGFRQ9NZT2 677 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 ZNF624Q9P2J8 865 aaPredicted RBP12.28□□□□□ -0.44
CPSF4-208ENST00000452047 DNAJC16Q9Y2G8 782 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 B3GALT1Q9Y5Z6 326 aa12.28□□□□□ -0.44
CPSF4-208ENST00000452047 MN1Q10571 1320 aaPredicted RBP12.28□□□□□ -0.44
CPSF4-208ENST00000452047 GLYATL1P3A0A0U1RQE8 302 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 MACROD2A1Z1Q3 448 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 EFCAB7A8K855 629 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 UGT1A9O60656 530 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 ANXA9O76027 345 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 RBP3P10745 1247 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 PYGMP11217 842 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 UGT1A6P19224 532 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 WT1P19544 449 aaPredicted RBP12.27□□□□□ -0.45
CPSF4-208ENST00000452047 UGT1A1P22309 533 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 UGT1A4P22310 534 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 RPL10P27635 214 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms