RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 TMTC3Q6ZXV5 915 aa4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 CENPQQ7L2Z9 268 aaPredicted RBP4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 RAB11FIP2Q7L804 512 aa4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 CCDC25Q86WR0 208 aa4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 CADM3Q8N126 398 aa4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 CNPY4Q8N129 248 aa4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 NME8Q8N427 588 aa4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 NUDCD2Q8WVJ2 157 aa4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 ZNF689Q96CS4 500 aaPredicted RBP4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 MED30Q96HR3 178 aa4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 CDCA3Q99618 268 aaPredicted RBP4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 ZNF700Q9H0M5 742 aa4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 PABPC3Q9H361 631 aaKnown RBP4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 ACTR5Q9H9F9 607 aaPredicted RBP4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 PDE11AQ9HCR9 933 aa4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 SETD4Q9NVD3 440 aa4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 ZDHHC7Q9NXF8 308 aa4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 NCKIPSDQ9NZQ3 722 aa4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 DLGAP2Q9P1A6 1054 aa4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 TUBE1Q9UJT0 475 aa4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 PTGDR2Q9Y5Y4 395 aa4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 KNTC1P50748 2209 aa4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 KIAA1671Q9BY89 1806 aa4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 NBEAQ8NFP9 2946 aa4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 CREBBPQ92793 2442 aa4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 ABCA12Q86UK0 2595 aa4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 CACNA1EQ15878 2313 aa4.43□□□□□ -1.7
GTF3C3-207ENST00000451088 LCTP09848 1927 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 A0A1B0GVT2 93 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 TCRBV7S3A2A0A539 114 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 MBLAC1A4D2B0 266 aaPredicted RBP4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 I6L893 689 aaPredicted RBP4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 ACOT8O14734 319 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 SKAP2O75563 359 aaPredicted RBP4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 ACTL6BO94805 426 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 APC2O95996 2303 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 HLA-DQA2P01906 255 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 ACAA1P09110 424 aaPredicted RBP4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 STAG3L1P0CL83 205 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 FGF3P11487 239 aaPredicted RBP4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 KLRC2P26717 231 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 SERPINB3P29508 390 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 GNA11P29992 359 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 SERPINF1P36955 418 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 AP2B1P63010 937 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 SP4Q02446 784 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 CDK18Q07002 472 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 ZNF528Q3MIS6 628 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 GALNTL6Q49A17 601 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 CEP55Q53EZ4 464 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 CES5AQ6NT32 575 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 MTFR2Q6P444 385 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 RINLQ6ZS11 566 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 TOGARAM2Q6ZUX3 1019 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 NIPA1Q7RTP0 329 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 PLPPR4Q7Z2D5 763 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 SRBD1Q8N5C6 995 aaKnown RBP4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 CMASQ8NFW8 434 aaPredicted RBP4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 NECTIN4Q96NY8 510 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 LSG1Q9H089 658 aaKnown RBP4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 IL25Q9H293 177 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 KLHL31Q9H511 634 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 RIC8AQ9NPQ8 531 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 TMEM51Q9NW97 253 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 SLC9A2Q9UBY0 812 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 FZD10Q9ULW2 581 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 C19orf53Q9UNZ5 99 aaPredicted RBP4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 RAI2Q9Y5P3 530 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 GOLGA4Q13439 2230 aaKnown RBP4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 ASCC3Q8N3C0 2202 aaKnown RBP4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 NFASCO94856 1347 aa4.42□□□□□ -1.7
GTF3C3-207ENST00000451088 AKAP13Q12802 2813 aa4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 DMXL2Q8TDJ6 3036 aa4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 KIAA1217Q5T5P2 1943 aa4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 TICRRQ7Z2Z1 1910 aa4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 SPEGQ15772 3267 aa4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 DENND3A2RUS2 1198 aa4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 TMEM8BA6NDV4 472 aa4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 NPIPB13A6NJU9 1138 aa4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 NPIPB5A8MRT5 1133 aa4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 NPIPB4C9JG80 1138 aa4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 HBP1O60381 514 aa4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 REC8O95072 547 aa4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 PLEKHA8P1O95397 391 aa4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 WEE2P0C1S8 567 aa4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 GHRP10912 638 aa4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 UNGP13051 313 aaPredicted RBP4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 PKMP14618 531 aaKnown RBP4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 GLULP15104 373 aa4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 MARK3P27448 753 aa4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 PSMA5P28066 241 aa4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 TMOD1P28289 359 aa4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 MTHFRP42898 656 aa4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 HTR3AP46098 478 aa4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 ENTPD1P49961 510 aa4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 METAP2P50579 478 aaKnown RBP eCLIP4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 CYP2J2P51589 502 aa4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 DSCR9P59020 149 aa4.41□□□□□ -1.7
GTF3C3-207ENST00000451088 KRTAP10-6P60371 365 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms