RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 TMEM44Q2T9K0 475 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 SULT1C3Q6IMI6 304 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 DOK6Q6PKX4 331 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 SLITRK4Q8IW52 837 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 SMG8Q8ND04 991 aaKnown RBP13.81□□□□□ -0.2
ITGB4-202ENST00000449880 DCAKDQ8WVC6 231 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 C12orf43Q96C57 262 aaKnown RBP13.81□□□□□ -0.2
ITGB4-202ENST00000449880 GAD1Q99259 594 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 ULBP1Q9BZM6 244 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 ZNF696Q9H7X3 374 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 NOCTQ9UK39 431 aaKnown RBP13.81□□□□□ -0.2
ITGB4-202ENST00000449880 TRAV19A0A0A6YYK7 116 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 OR6A2O95222 327 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 METTL18O95568 372 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 GOT1P17174 413 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 PITPNAQ00169 270 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 AHSA2Q719I0 299 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 TRAPPC5Q8IUR0 188 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 KIAA0319LQ8IZA0 1049 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 TTC29Q8NA56 475 aaPredicted RBP13.81□□□□□ -0.2
ITGB4-202ENST00000449880 GLB1L3Q8NCI6 653 aaPredicted RBP13.81□□□□□ -0.2
ITGB4-202ENST00000449880 SPACA7Q96KW9 195 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 KCNN2Q9H2S1 579 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 SH3PXD2BA1X283 911 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 ANKDD1BA6NHY2 528 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 LRRC14BA6NHZ5 514 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 IFNA16P05015 189 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 TLX1P31314 330 aaPredicted RBP13.81□□□□□ -0.2
ITGB4-202ENST00000449880 SNRPD1P62314 119 aaKnown RBP13.81□□□□□ -0.2
ITGB4-202ENST00000449880 VWA5B1Q5TIE3 1220 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 LLGL2Q6P1M3 1020 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 ZNF773Q6PK81 442 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 RASAL3Q86YV0 1011 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 TMIEQ8NEW7 156 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 PJA1Q8NG27 643 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 C1QTNF1Q9BXJ1 281 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 OR14I1A6ND48 311 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 TBX1O43435 398 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 USP2O75604 605 aaPredicted RBP13.81□□□□□ -0.2
ITGB4-202ENST00000449880 USP17L7P0C7H9 530 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 SMIM10L2AP0DMW4 78 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 SMIM10L2BP0DMW5 78 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 RFTN2Q52LD8 501 aaPredicted RBP13.81□□□□□ -0.2
ITGB4-202ENST00000449880 HECTD3Q5T447 861 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 GPR142Q7Z601 462 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 COLGALT2Q8IYK4 626 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 RGL4Q8IZJ4 473 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 GJD3Q8N144 294 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 TMEM199Q8N511 208 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 NIPA2Q8N8Q9 360 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 CXorf40AQ8TE69 158 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 GBA3Q9H227 469 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 NUDT4Q9NZJ9 180 aa13.81□□□□□ -0.2
ITGB4-202ENST00000449880 STOX2Q9P2F5 926 aaPredicted RBP13.81□□□□□ -0.2
ITGB4-202ENST00000449880 TSPAN4O14817 238 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 B4GALT5O43286 388 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 ZNF24P17028 368 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 CD86P42081 329 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 OMPP47874 163 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 BEX3Q00994 111 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 LCP2Q13094 533 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 HECTD2Q5U5R9 776 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 METTL3Q86U44 580 aaKnown RBP13.8□□□□□ -0.2
ITGB4-202ENST00000449880 XYLT1Q86Y38 959 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 ZC3H7AQ8IWR0 971 aaKnown RBP13.8□□□□□ -0.2
ITGB4-202ENST00000449880 HDAC10Q969S8 669 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 C1GALT1C1Q96EU7 318 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 FEM1CQ96JP0 617 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 GATA5Q9BWX5 397 aaPredicted RBP13.8□□□□□ -0.2
ITGB4-202ENST00000449880 CNTN6Q9UQ52 1028 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 SLC15A5A6NIM6 579 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 AP2A2O94973 939 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 CREB1P16220 341 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 PTPN1P18031 435 aaKnown RBP13.8□□□□□ -0.2
ITGB4-202ENST00000449880 SLC18A2Q05940 514 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 ANKRD22Q5VYY1 191 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.8□□□□□ -0.2
ITGB4-202ENST00000449880 PLD5Q8N7P1 536 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 ADAM32Q8TC27 787 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 RDH12Q96NR8 316 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 GPR20Q99678 358 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 HTATIP2Q9BUP3 242 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 FAIM2Q9BWQ8 316 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 IRF2BPLQ9H1B7 796 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 MRPS7Q9Y2R9 242 aaKnown RBP13.8□□□□□ -0.2
ITGB4-202ENST00000449880 PKD1L3Q7Z443 1732 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 ATP6AP2A0A1C7CYW4 349 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 TRIM64CA6NLI5 447 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 ATP6AP2O75787 350 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 BCAS2O75934 225 aaPredicted RBP13.8□□□□□ -0.2
ITGB4-202ENST00000449880 GJB1P08034 283 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 ERP29P30040 261 aaKnown RBP13.8□□□□□ -0.2
ITGB4-202ENST00000449880 GNPDA1P46926 289 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 CCNIQ14094 377 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 VPS26BQ4G0F5 336 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 PIK3R6Q5UE93 754 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 CCDC28AQ8IWP9 274 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 FTHL17Q9BXU8 183 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 MLXQ9UH92 298 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 FAM172BPA6NC97 362 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms