RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 SYCE1Q8N0S2 351 aa15.07■□□□□ 0
CHD3-205ENST00000449744 TTC30BQ8N4P2 665 aa15.07■□□□□ 0
CHD3-205ENST00000449744 LSM14AQ8ND56 463 aaKnown RBP15.07■□□□□ 0
CHD3-205ENST00000449744 AGBL5Q8NDL9 886 aa15.07■□□□□ 0
CHD3-205ENST00000449744 BRSK1Q8TDC3 778 aa15.07■□□□□ 0
CHD3-205ENST00000449744 SLC39A7Q92504 469 aa15.07■□□□□ 0
CHD3-205ENST00000449744 FICDQ9BVA6 458 aa15.07■□□□□ 0
CHD3-205ENST00000449744 GBA3Q9H227 469 aa15.07■□□□□ 0
CHD3-205ENST00000449744 IL17CQ9P0M4 197 aa15.07■□□□□ 0
CHD3-205ENST00000449744 DNAJC16Q9Y2G8 782 aa15.07■□□□□ 0
CHD3-205ENST00000449744 SSUH2Q9Y2M2 353 aa15.07■□□□□ 0
CHD3-205ENST00000449744 AAR2Q9Y312 384 aaKnown RBP15.07■□□□□ 0
CHD3-205ENST00000449744 GLYATL1P3A0A0U1RQE8 302 aa15.06■□□□□ 0
CHD3-205ENST00000449744 GRID2IPA4D2P6 1211 aa15.06■□□□□ 0
CHD3-205ENST00000449744 A6NCN8 305 aa15.06■□□□□ 0
CHD3-205ENST00000449744 GOLGA6L9A6NEM1 432 aa15.06■□□□□ 0
CHD3-205ENST00000449744 PDZK1P1A8MUH7 402 aa15.06■□□□□ 0
CHD3-205ENST00000449744 C9orf172C9J069 976 aa15.06■□□□□ 0
CHD3-205ENST00000449744 K7ENP7 123 aa15.06■□□□□ 0
CHD3-205ENST00000449744 ERVH48-1M5A8F1 160 aa15.06■□□□□ 0
CHD3-205ENST00000449744 TK2O00142 265 aa15.06■□□□□ 0
CHD3-205ENST00000449744 STX7O15400 261 aaKnown RBP15.06■□□□□ 0
CHD3-205ENST00000449744 KCNN4O15554 427 aa15.06■□□□□ 0
CHD3-205ENST00000449744 VCLP18206 1134 aa15.06■□□□□ 0
CHD3-205ENST00000449744 CD82P27701 267 aa15.06■□□□□ 0
CHD3-205ENST00000449744 EPHA4P54764 986 aa15.06■□□□□ 0
CHD3-205ENST00000449744 TMEM115Q12893 351 aaPredicted RBP15.06■□□□□ 0
CHD3-205ENST00000449744 ITGA9Q13797 1035 aa15.06■□□□□ 0
CHD3-205ENST00000449744 TGIF1Q15583 401 aa15.06■□□□□ 0
CHD3-205ENST00000449744 SNAP47Q5SQN1 464 aa15.06■□□□□ 0
CHD3-205ENST00000449744 INO80CQ6PI98 192 aaPredicted RBP15.06■□□□□ 0
CHD3-205ENST00000449744 FAM151BQ6UXP7 276 aa15.06■□□□□ 0
CHD3-205ENST00000449744 PEX26Q7Z412 305 aa15.06■□□□□ 0
CHD3-205ENST00000449744 TRAPPC5Q8IUR0 188 aa15.06■□□□□ 0
CHD3-205ENST00000449744 UBL4BQ8N7F7 174 aa15.06■□□□□ 0
CHD3-205ENST00000449744 DTX3LQ8TDB6 740 aa15.06■□□□□ 0
CHD3-205ENST00000449744 NCSTNQ92542 709 aa15.06■□□□□ 0
CHD3-205ENST00000449744 TAAR9Q96RI9 348 aa15.06■□□□□ 0
CHD3-205ENST00000449744 TIMM29Q9BSF4 260 aa15.06■□□□□ 0
CHD3-205ENST00000449744 ZCCHC2Q9C0B9 1178 aaKnown RBP15.06■□□□□ 0
CHD3-205ENST00000449744 B3GNT4Q9C0J1 378 aa15.06■□□□□ 0
CHD3-205ENST00000449744 IL26Q9NPH9 171 aa15.06■□□□□ 0
CHD3-205ENST00000449744 FOXJ2Q9P0K8 574 aa15.06■□□□□ 0
CHD3-205ENST00000449744 TMEM9Q9P0T7 183 aa15.06■□□□□ 0
CHD3-205ENST00000449744 IMPACTQ9P2X3 320 aa15.06■□□□□ 0
CHD3-205ENST00000449744 CPNE7Q9UBL6 633 aa15.06■□□□□ 0
CHD3-205ENST00000449744 SLC23A2Q9UGH3 650 aa15.06■□□□□ 0
CHD3-205ENST00000449744 SCN8AQ9UQD0 1980 aa15.05■□□□□ 0
CHD3-205ENST00000449744 IGSF10Q6WRI0 2623 aa15.05■□□□□ 0
CHD3-205ENST00000449744 GOLGA6L6A8MZA4 724 aa15.05■□□□□ -0
CHD3-205ENST00000449744 BUD23O43709 281 aaKnown RBP15.05■□□□□ -0
CHD3-205ENST00000449744 PPFIA2O75334 1257 aa15.05■□□□□ -0
CHD3-205ENST00000449744 ZNF189O75820 626 aaPredicted RBP15.05■□□□□ -0
CHD3-205ENST00000449744 AGTP01019 485 aa15.05■□□□□ -0
CHD3-205ENST00000449744 VIPP01282 170 aa15.05■□□□□ -0
CHD3-205ENST00000449744 PYGMP11217 842 aa15.05■□□□□ -0
CHD3-205ENST00000449744 IDSP22304 550 aa15.05■□□□□ -0
CHD3-205ENST00000449744 CFHR1Q03591 330 aa15.05■□□□□ -0
CHD3-205ENST00000449744 CHRNA6Q15825 494 aa15.05■□□□□ -0
CHD3-205ENST00000449744 SEPT7Q16181 437 aaKnown RBP15.05■□□□□ -0
CHD3-205ENST00000449744 KHDC1Q4VXA5 237 aaKnown RBP15.05■□□□□ -0
CHD3-205ENST00000449744 ANKRD20A2Q5SQ80 823 aa15.05■□□□□ -0
CHD3-205ENST00000449744 MANEAQ5SRI9 462 aa15.05■□□□□ -0
CHD3-205ENST00000449744 LDLRAP1Q5SW96 308 aa15.05■□□□□ -0
CHD3-205ENST00000449744 ANKRD20A1Q5TYW2 823 aa15.05■□□□□ -0
CHD3-205ENST00000449744 ANKRD20A3Q5VUR7 823 aa15.05■□□□□ -0
CHD3-205ENST00000449744 WDR74Q6RFH5 385 aaPredicted RBP15.05■□□□□ -0
CHD3-205ENST00000449744 ZFAND4Q86XD8 727 aa15.05■□□□□ -0
CHD3-205ENST00000449744 FAM129CQ86XR2 697 aa15.05■□□□□ -0
CHD3-205ENST00000449744 LRRC57Q8N9N7 239 aa15.05■□□□□ -0
CHD3-205ENST00000449744 SPC24Q8NBT2 197 aa15.05■□□□□ -0
CHD3-205ENST00000449744 ALG3Q92685 438 aa15.05■□□□□ -0
CHD3-205ENST00000449744 LRRC45Q96CN5 670 aa15.05■□□□□ -0
CHD3-205ENST00000449744 PPP1R2P1Q96PQ5 205 aa15.05■□□□□ -0
CHD3-205ENST00000449744 FAM118BQ9BPY3 351 aa15.05■□□□□ -0
CHD3-205ENST00000449744 EPB41L1Q9H4G0 881 aa15.05■□□□□ -0
CHD3-205ENST00000449744 TMPRSS11EQ9UL52 423 aa15.05■□□□□ -0
CHD3-205ENST00000449744 LAMA5O15230 3695 aa15.05■□□□□ -0
CHD3-205ENST00000449744 LILRA5A6NI73 299 aa15.04■□□□□ -0
CHD3-205ENST00000449744 C2orf81A6NN90 581 aa15.04■□□□□ -0
CHD3-205ENST00000449744 EFCAB7A8K855 629 aa15.04■□□□□ -0
CHD3-205ENST00000449744 A8MU76 341 aa15.04■□□□□ -0
CHD3-205ENST00000449744 MIF4GDA9UHW6 222 aaKnown RBP15.04■□□□□ -0
CHD3-205ENST00000449744 UGT1A9O60656 530 aa15.04■□□□□ -0
CHD3-205ENST00000449744 FGF3P11487 239 aaPredicted RBP15.04■□□□□ -0
CHD3-205ENST00000449744 XRCC1P18887 633 aaPredicted RBP15.04■□□□□ -0
CHD3-205ENST00000449744 UGT1A6P19224 532 aa15.04■□□□□ -0
CHD3-205ENST00000449744 UGT1A1P22309 533 aa15.04■□□□□ -0
CHD3-205ENST00000449744 UGT1A4P22310 534 aa15.04■□□□□ -0
CHD3-205ENST00000449744 PSMB4P28070 264 aa15.04■□□□□ -0
CHD3-205ENST00000449744 UGT1A3P35503 534 aa15.04■□□□□ -0
CHD3-205ENST00000449744 C19orf57Q0VDD7 668 aa15.04■□□□□ -0
CHD3-205ENST00000449744 AADACL2Q6P093 401 aa15.04■□□□□ -0
CHD3-205ENST00000449744 ZNF547Q8IVP9 402 aa15.04■□□□□ -0
CHD3-205ENST00000449744 TTC13Q8NBP0 860 aa15.04■□□□□ -0
CHD3-205ENST00000449744 SNRNP27Q8WVK2 155 aaKnown RBP15.04■□□□□ -0
CHD3-205ENST00000449744 ART4Q93070 314 aa15.04■□□□□ -0
CHD3-205ENST00000449744 SPATA13Q96N96 652 aa15.04■□□□□ -0
CHD3-205ENST00000449744 APOL2Q9BQE5 337 aa15.04■□□□□ -0
CHD3-205ENST00000449744 TBC1D10AQ9BXI6 508 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms