RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 ATP11CQ8NB49 1132 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 NOC3LQ8WTT2 800 aaKnown RBP3.23□□□□□ -1.89
PMS1-215ENST00000447232 AHCYL2Q96HN2 611 aaKnown RBP3.23□□□□□ -1.89
PMS1-215ENST00000447232 SGSM3Q96HU1 749 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 HEPHQ9BQS7 1158 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 KIAA1586Q9HCI6 787 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 VTI1BQ9UEU0 232 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 GPR160Q9UJ42 338 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 BTRCQ9Y297 605 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 DRGXA6NNA5 263 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 TULP2O00295 520 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 SNAP91O60641 907 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 CTAG2O75638 210 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 VNN1O95497 513 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 C9P02748 559 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 FUCA1P04066 466 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 RAB40ALP0C0E4 278 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 AK4P27144 223 aaPredicted RBP3.22□□□□□ -1.89
PMS1-215ENST00000447232 TOB1P50616 345 aaPredicted RBP3.22□□□□□ -1.89
PMS1-215ENST00000447232 CCNHP51946 323 aaPredicted RBP3.22□□□□□ -1.89
PMS1-215ENST00000447232 TFF3Q07654 80 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 CYP24A1Q07973 514 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 SNRNP35Q16560 246 aaKnown RBP3.22□□□□□ -1.89
PMS1-215ENST00000447232 KYNUQ16719 465 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 DEFB113Q30KQ7 82 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 ZNF805Q5CZA5 627 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 FAM69BQ5VUD6 431 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 RNF111Q6ZNA4 994 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 CHSY1Q86X52 802 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 PPP1R3BQ86XI6 285 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 NCSTNQ92542 709 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 ELMO2Q96JJ3 720 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 FCRL4Q96PJ5 515 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 TAAR6Q96RI8 345 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 MENTQ9BUN1 341 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 NT5C1AQ9BXI3 368 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 GSDMCQ9BYG8 508 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 FGFBP2Q9BYJ0 223 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 ZSCAN16Q9H4T2 348 aaPredicted RBP3.22□□□□□ -1.89
PMS1-215ENST00000447232 MRPL44Q9H9J2 332 aaKnown RBP3.22□□□□□ -1.89
PMS1-215ENST00000447232 TRNAU1APQ9NX07 287 aaKnown RBP3.22□□□□□ -1.89
PMS1-215ENST00000447232 TRPS1Q9UHF7 1281 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 VPS28Q9UK41 221 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 TCFL5Q9UL49 500 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 TBC1D30Q9Y2I9 924 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 CYP46A1Q9Y6A2 500 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 DOCK10Q96BY6 2186 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 TMEM82A0PJX8 343 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 PRSS38A1L453 326 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 SPTLC2O15270 562 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 TOX3O15405 576 aaPredicted RBP3.22□□□□□ -1.89
PMS1-215ENST00000447232 CUTAO60888 179 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 SLCO2B1O94956 709 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 UNC5CO95185 931 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 ATE1O95260 518 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 KRT18P05783 430 aaKnown RBP3.22□□□□□ -1.89
PMS1-215ENST00000447232 P4HA1P13674 534 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 TRIM21P19474 475 aaKnown RBP3.22□□□□□ -1.89
PMS1-215ENST00000447232 RPL10P27635 214 aaKnown RBP3.22□□□□□ -1.89
PMS1-215ENST00000447232 TRIM23P36406 574 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 DGKQP52824 942 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 DAOAP59103 153 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 ADIGQ0VDE8 80 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 ILF3Q12906 894 aaKnown RBP eCLIP3.22□□□□□ -1.89
PMS1-215ENST00000447232 BIRC2Q13490 618 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 C3AR1Q16581 482 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 TMEM52BQ4KMG9 183 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 PDLIM3Q53GG5 364 aaPredicted RBP3.22□□□□□ -1.89
PMS1-215ENST00000447232 PWWP2BQ6NUJ5 590 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 C16orf47Q6ZP98 133 aaPredicted RBP3.22□□□□□ -1.89
PMS1-215ENST00000447232 TECPR1Q7Z6L1 1165 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 ULK2Q8IYT8 1036 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 SYCP3Q8IZU3 236 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 SFRP1Q8N474 314 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 PLA2G15Q8NCC3 412 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 ACRBPQ8NEB7 543 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 DNAJB14Q8TBM8 379 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 CXorf40AQ8TE69 158 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 RAD54LQ92698 747 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 CCDC127Q96BQ5 260 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 CDK5RAP3Q96JB5 506 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 C20orf173Q96LM9 149 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 C9orf72Q96LT7 481 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 SPRTNQ9H040 489 aaPredicted RBP3.22□□□□□ -1.89
PMS1-215ENST00000447232 FOXP1Q9H334 677 aaPredicted RBP3.22□□□□□ -1.89
PMS1-215ENST00000447232 OLFML3Q9NRN5 406 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 SH3BGRL2Q9UJC5 107 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 SNX7Q9UNH6 387 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 COQ6Q9Y2Z9 468 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 MEMO1Q9Y316 297 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 PCDHB14Q9Y5E9 798 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 SLC30A1Q9Y6M5 507 aa3.22□□□□□ -1.89
PMS1-215ENST00000447232 CCDC78A2IDD5 438 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 F5H5T6 163 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 CACNB4O00305 520 aaPredicted RBP3.21□□□□□ -1.9
PMS1-215ENST00000447232 PRRG2O14669 202 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 XPO1O14980 1071 aaKnown RBP3.21□□□□□ -1.9
PMS1-215ENST00000447232 PHF1O43189 567 aaPredicted RBP3.21□□□□□ -1.9
PMS1-215ENST00000447232 SLC19A2O60779 497 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 ZWINTO95229 277 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms