RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 TUBBP07437 444 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 THEGLP0DJG4 465 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 CD38P28907 300 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 AKT1P31749 480 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 RACK1P63244 317 aaKnown RBP17.04■□□□□ 0.32
LIME1-202ENST00000444951 CDK3Q00526 305 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 SEMA3AQ14563 771 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 ZNF423Q2M1K9 1284 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 KIF19Q2TAC6 998 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 PDPK2PQ6A1A2 396 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 ZNF470Q6ECI4 717 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 NLRP8Q86W28 1048 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 SERPINA9Q86WD7 417 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 BTN2A2Q8WVV5 523 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 UBLCP1Q8WVY7 318 aaPredicted RBP17.04■□□□□ 0.32
LIME1-202ENST00000444951 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.04■□□□□ 0.325e-8■■■■■ 65.3
LIME1-202ENST00000444951 GLYATL1Q969I3 302 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 FUBP1Q96AE4 644 aaKnown RBP17.04■□□□□ 0.32
LIME1-202ENST00000444951 KLHDC7BQ96G42 594 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 TTC25Q96NG3 672 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 C19orf43Q9BQ61 176 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 PHPT1Q9NRX4 125 aaPredicted RBP17.04■□□□□ 0.32
LIME1-202ENST00000444951 TM7SF3Q9NS93 570 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 MOSPD1Q9UJG1 213 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 CNOT6Q9ULM6 557 aaKnown RBP17.04■□□□□ 0.32
LIME1-202ENST00000444951 BTBD3Q9Y2F9 522 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 TMEM98Q9Y2Y6 226 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 SNX11Q9Y5W9 270 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 ANKRD11Q6UB99 2663 aaPredicted RBP17.04■□□□□ 0.32
LIME1-202ENST00000444951 TCRBV9S1A1TA0A576 114 aa17.03■□□□□ 0.32
LIME1-202ENST00000444951 CACNB4O00305 520 aaPredicted RBP17.03■□□□□ 0.32
LIME1-202ENST00000444951 CTIFO43310 598 aaKnown RBP17.03■□□□□ 0.32
LIME1-202ENST00000444951 WNT1P04628 370 aa17.03■□□□□ 0.32
LIME1-202ENST00000444951 PHBP35232 272 aa17.03■□□□□ 0.32
LIME1-202ENST00000444951 POLD2P49005 469 aa17.03■□□□□ 0.32
LIME1-202ENST00000444951 THOP1P52888 689 aa17.03■□□□□ 0.32
LIME1-202ENST00000444951 MGAT5Q09328 741 aa17.03■□□□□ 0.32
LIME1-202ENST00000444951 PDE1CQ14123 709 aaPredicted RBP17.03■□□□□ 0.32
LIME1-202ENST00000444951 GPR33Q49SQ1 333 aa17.03■□□□□ 0.32
LIME1-202ENST00000444951 GPRC6AQ5T6X5 926 aa17.03■□□□□ 0.32
LIME1-202ENST00000444951 MRNIPQ6NTE8 343 aa17.03■□□□□ 0.32
LIME1-202ENST00000444951 KYAT3Q6YP21 454 aaKnown RBP17.03■□□□□ 0.32
LIME1-202ENST00000444951 MARK2Q7KZI7 788 aaKnown RBP17.03■□□□□ 0.32
LIME1-202ENST00000444951 ABI3BPQ7Z7G0 1075 aa17.03■□□□□ 0.32
LIME1-202ENST00000444951 SDCCAG8Q86SQ7 713 aaPredicted RBP17.03■□□□□ 0.32
LIME1-202ENST00000444951 RELL1Q8IUW5 271 aa17.03■□□□□ 0.32
LIME1-202ENST00000444951 PHYKPLQ8IUZ5 450 aa17.03■□□□□ 0.32
LIME1-202ENST00000444951 DENND6AQ8IWF6 608 aa17.03■□□□□ 0.32
LIME1-202ENST00000444951 NXPE1Q8N323 547 aa17.03■□□□□ 0.32
LIME1-202ENST00000444951 BAHD1Q8TBE0 780 aaPredicted RBP17.03■□□□□ 0.32
LIME1-202ENST00000444951 FBF1Q8TES7 1133 aa17.03■□□□□ 0.32
LIME1-202ENST00000444951 AENQ8WTP8 325 aaKnown RBP17.03■□□□□ 0.32
LIME1-202ENST00000444951 SETD7Q8WTS6 366 aaKnown RBP17.03■□□□□ 0.32
LIME1-202ENST00000444951 NAT14Q8WUY8 206 aa17.03■□□□□ 0.32
LIME1-202ENST00000444951 ADAMTS14Q8WXS8 1223 aa17.03■□□□□ 0.32
LIME1-202ENST00000444951 ULK4Q96C45 1275 aa17.03■□□□□ 0.32
LIME1-202ENST00000444951 MRRFQ96E11 262 aaKnown RBP17.03■□□□□ 0.32
LIME1-202ENST00000444951 FAM167BQ9BTA0 163 aa17.03■□□□□ 0.32
LIME1-202ENST00000444951 TEX101Q9BY14 249 aa17.03■□□□□ 0.32
LIME1-202ENST00000444951 TOR4AQ9NXH8 423 aa17.03■□□□□ 0.32
LIME1-202ENST00000444951 OAS3Q9Y6K5 1087 aaKnown RBP17.03■□□□□ 0.32
LIME1-202ENST00000444951 NBEAQ8NFP9 2946 aa17.02■□□□□ 0.32
LIME1-202ENST00000444951 CER1O95813 267 aa17.02■□□□□ 0.32
LIME1-202ENST00000444951 GSTA2P09210 222 aa17.02■□□□□ 0.32
LIME1-202ENST00000444951 ZNF883P0CG24 379 aa17.02■□□□□ 0.32
LIME1-202ENST00000444951 TRIM23P36406 574 aa17.02■□□□□ 0.32
LIME1-202ENST00000444951 RABIFP47224 123 aa17.02■□□□□ 0.32
LIME1-202ENST00000444951 C21orf59P57076 290 aa17.02■□□□□ 0.32
LIME1-202ENST00000444951 PFN3P60673 137 aa17.02■□□□□ 0.32
LIME1-202ENST00000444951 CTBP1Q13363 440 aa17.02■□□□□ 0.32
LIME1-202ENST00000444951 DBN1Q16643 649 aa17.02■□□□□ 0.32
LIME1-202ENST00000444951 KHDC1Q4VXA5 237 aaKnown RBP17.02■□□□□ 0.32
LIME1-202ENST00000444951 AARS2Q5JTZ9 985 aaKnown RBP17.02■□□□□ 0.32
LIME1-202ENST00000444951 TPRG1LQ5T0D9 272 aa17.02■□□□□ 0.32
LIME1-202ENST00000444951 EMBQ6PCB8 327 aa17.02■□□□□ 0.32
LIME1-202ENST00000444951 ENPP7Q6UWV6 458 aa17.02■□□□□ 0.32
LIME1-202ENST00000444951 DBX2Q6ZNG2 339 aa17.02■□□□□ 0.32
LIME1-202ENST00000444951 TRMT10CQ7L0Y3 403 aaKnown RBP17.02■□□□□ 0.32
LIME1-202ENST00000444951 DET1Q7L5Y6 550 aa17.02■□□□□ 0.32
LIME1-202ENST00000444951 GLRX5Q86SX6 157 aa17.02■□□□□ 0.32
LIME1-202ENST00000444951 CTAGE3PQ8IX95 158 aa17.02■□□□□ 0.32
LIME1-202ENST00000444951 CCDC97Q96F63 343 aaPredicted RBP17.02■□□□□ 0.32
LIME1-202ENST00000444951 DCUN1D1Q96GG9 259 aa17.02■□□□□ 0.32
LIME1-202ENST00000444951 VPS35Q96QK1 796 aa17.02■□□□□ 0.32
LIME1-202ENST00000444951 TXLNGYQ9BZA5 131 aa17.02■□□□□ 0.32
LIME1-202ENST00000444951 OR2AG1Q9H205 316 aa17.02■□□□□ 0.32
LIME1-202ENST00000444951 FBXO6Q9NRD1 293 aaPredicted RBP17.02■□□□□ 0.32
LIME1-202ENST00000444951 ZFATQ9P243 1243 aa17.02■□□□□ 0.32
LIME1-202ENST00000444951 A0A1W2PR77 199 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 UBA6A0AVT1 1052 aaPredicted RBP17.01■□□□□ 0.31
LIME1-202ENST00000444951 SCAMP1O15126 338 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 NDUFS3O75489 264 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 SPAG6O75602 509 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 MYCLP1P12525 358 aaPredicted RBP17.01■□□□□ 0.31
LIME1-202ENST00000444951 MSH3P20585 1137 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 ACRV1P26436 265 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 HTR1BP28222 390 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 STX2P32856 288 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 SLC1A2P43004 574 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 AFF3P51826 1226 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms