RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 ZNF547Q8IVP9 402 aa14.83□□□□□ -0.04
CSNK1E-210ENST00000442216 PPIL6Q8IXY8 311 aa14.83□□□□□ -0.04
CSNK1E-210ENST00000442216 NAGSQ8N159 534 aa14.83□□□□□ -0.04
CSNK1E-210ENST00000442216 CHCHD4Q8N4Q1 142 aa14.83□□□□□ -0.04
CSNK1E-210ENST00000442216 TRIM44Q96DX7 344 aaPredicted RBP14.83□□□□□ -0.04
CSNK1E-210ENST00000442216 XAB2Q9HCS7 855 aaKnown RBP14.83□□□□□ -0.04
CSNK1E-210ENST00000442216 SIRPGQ9P1W8 387 aa14.83□□□□□ -0.04
CSNK1E-210ENST00000442216 PRKAB1Q9Y478 270 aa14.83□□□□□ -0.04
CSNK1E-210ENST00000442216 PLEKHM1Q9Y4G2 1056 aa14.83□□□□□ -0.04
CSNK1E-210ENST00000442216 IGLV3-16A0A075B6K0 115 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 CPED1A4D0V7 1026 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 PRR19A6NJB7 356 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 OR5K4A6NMS3 321 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 B4DGG1 531 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 CFAP99D6REC4 459 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 HYAL3O43820 417 aaPredicted RBP14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 MYF5P13349 255 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 VCLP18206 1134 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 ACRV1P26436 265 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 AKT1P31749 480 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 SESN2P58004 480 aaPredicted RBP14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 DMPKQ09013 629 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 DHX34Q14147 1143 aaKnown RBP14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 INSCQ1MX18 579 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 CCDC157Q569K6 752 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 ZRANB3Q5FWF4 1079 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 LYPLAL1Q5VWZ2 237 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 AFTPHQ6ULP2 937 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 CRTC3Q6UUV7 619 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 C11orf96Q7Z7L8 435 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 TRAPPC5Q8IUR0 188 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 RASGEF1AQ8N9B8 481 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 NAT8LQ8N9F0 302 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 AVL9Q8NBF6 648 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 DCUN1D1Q96GG9 259 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 COPS8Q99627 209 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 KIFC1Q9BW19 673 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 SCNM1Q9BWG6 230 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 CHRAC1Q9NRG0 131 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 KLC4Q9NSK0 619 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 TREX1Q9NSU2 369 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 ZDHHC3Q9NYG2 299 aa14.82□□□□□ -0.04
CSNK1E-210ENST00000442216 MAGEB16A2A368 324 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 KIF2AO00139 706 aaPredicted RBP14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 SMAPO00193 183 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 CCL22O00626 93 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 DNALI1O14645 258 aaPredicted RBP14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 ZW10O43264 779 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 OPA1O60313 960 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 TMEM63AO94886 807 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 F3P13726 295 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 ATP1B2P14415 290 aaPredicted RBP14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 MGAT1P26572 445 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 FOXN2P32314 431 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 FASLGP48023 281 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 ARSDP51689 593 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 PRAMEP78395 509 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 INSM1Q01101 510 aaPredicted RBP14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 DR1Q01658 176 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 ITIH4Q14624 930 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 NR1D2Q14995 579 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 BCL7AQ4VC05 210 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 PERM1Q5SV97 790 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 RNASEH2BQ5TBB1 312 aaKnown RBP14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 ANKRD22Q5VYY1 191 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 TMEM220Q6QAJ8 160 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 WASH2PQ6VEQ5 465 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 CERS6Q6ZMG9 384 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 ZNF438Q7Z4V0 828 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 CAND1Q86VP6 1230 aaKnown RBP14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 HOOK3Q86VS8 718 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 AMZ2Q86W34 360 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 SERPINA9Q86WD7 417 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 KLHL7Q8IXQ5 586 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 HDAC10Q969S8 669 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 LINC00615Q96LM1 132 aaPredicted RBP14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 ZNF778Q96MU6 729 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 SERPINB12Q96P63 405 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 TTC1Q99614 292 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 ABCG4Q9H172 646 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 WASH6PQ9NQA3 447 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 ASIC3Q9UHC3 531 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 SOX13Q9UN79 622 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 KCNK6Q9Y257 313 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 MSRB2Q9Y3D2 182 aa14.81□□□□□ -0.04
CSNK1E-210ENST00000442216 KIR2DS5A0A0G2JLQ3 304 aa14.8□□□□□ -0.04
CSNK1E-210ENST00000442216 A0A0G2JNG1 304 aa14.8□□□□□ -0.04
CSNK1E-210ENST00000442216 CCDC162PA2VCL2 907 aa14.8□□□□□ -0.04
CSNK1E-210ENST00000442216 A6NCN8 305 aa14.8□□□□□ -0.04
CSNK1E-210ENST00000442216 SDR42E2A6NKP2 422 aa14.8□□□□□ -0.04
CSNK1E-210ENST00000442216 OR2AG2A6NM03 316 aa14.8□□□□□ -0.04
CSNK1E-210ENST00000442216 KIR2DS3K7RE56 304 aa14.8□□□□□ -0.04
CSNK1E-210ENST00000442216 QSOX1O00391 747 aa14.8□□□□□ -0.04
CSNK1E-210ENST00000442216 TCEA3O75764 348 aa14.8□□□□□ -0.04
CSNK1E-210ENST00000442216 AP2A2O94973 939 aa14.8□□□□□ -0.04
CSNK1E-210ENST00000442216 IDSP22304 550 aa14.8□□□□□ -0.04
CSNK1E-210ENST00000442216 PPARGP37231 505 aaPredicted RBP14.8□□□□□ -0.04
CSNK1E-210ENST00000442216 MAGEA3P43357 314 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms