RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 AZI2Q9H6S1 392 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 SAYSD1Q9NPB0 183 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 ACP6Q9NPH0 428 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 TMEM160Q9NX00 188 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 GAR1Q9NY12 217 aaKnown RBP3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 KIF17Q9P2E2 1029 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 KLHL13Q9P2N7 655 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 UVRAGQ9P2Y5 699 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 MGAT4CQ9UBM8 478 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 LPAR3Q9UBY5 353 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 CNOT8Q9UFF9 292 aaKnown RBP3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 STEAP1Q9UHE8 339 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 AMACRQ9UHK6 382 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 FAM153AQ9UHL3 310 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 RASAL2Q9UJF2 1139 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 AGO2Q9UKV8 859 aaKnown RBP3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 MTUS1Q9ULD2 1270 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 ZMYND8Q9ULU4 1186 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 DTNAQ9Y4J8 743 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 FCHO1O14526 889 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 CLDN3O15551 220 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 SHOX2O60902 331 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 CNMDO75829 334 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 ACTL6BO94805 426 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 DDNO94850 711 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 VNN1O95497 513 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 GLP2RO95838 553 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 CLTAP09496 248 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 MYZAPP0CAP1 466 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 UNGP13051 313 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 PECAM1P16284 738 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 TPH1P17752 444 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 TBXAS1P24557 533 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 TACR3P29371 465 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 MAPK4P31152 587 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 UQCRC1P31930 480 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 CTNNA1P35221 906 aaKnown RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 NF2P35240 595 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 TCF7P36402 384 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 HSD17B3P37058 310 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 PIK3CAP42336 1068 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 SLC1A1P43005 524 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 NR4A2P43354 598 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 NSFP46459 744 aaKnown RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 PTDSS1P48651 473 aaKnown RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 ACOT2P49753 483 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 CPT1AP50416 773 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 GATMP50440 423 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 EFNA5P52803 228 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 NR1H2P55055 460 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 RWDD2BP57060 319 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 NLRP11P59045 1033 aaKnown RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 KRTAP10-9P60411 292 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 LMAN2Q12907 356 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 CUL2Q13617 745 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 MXD4Q14582 209 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 CLCA4Q14CN2 919 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 TRIM71Q2Q1W2 868 aaKnown RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 TTMPQ5BVD1 217 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 CEP85LQ5SZL2 805 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 AGBL2Q5U5Z8 902 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 NAA35Q5VZE5 725 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 DUPD1Q68J44 220 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 PLAG1Q6DJT9 500 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 ZNF280DQ6N043 979 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 CCDC137Q6PK04 289 aaKnown RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 KLHL17Q6TDP4 642 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 METTL7BQ6UX53 244 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 CRELD2Q6UXH1 353 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 LRRC31Q6UY01 552 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 DLK2Q6UY11 383 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 KDM7AQ6ZMT4 941 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 DEF8Q6ZN54 512 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 DPY19L3Q6ZPD9 716 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 FASTKD5Q7L8L6 764 aaKnown RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 PLPPR4Q7Z2D5 763 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 ANKRD13BQ86YJ7 626 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 SLC13A5Q86YT5 568 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 ZBTB8OSQ8IWT0 167 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 MCOLN2Q8IZK6 566 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 ARFGAP2Q8N6H7 521 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 PNPLA1Q8N8W4 532 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 PRELID2Q8N945 189 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 SCAMP5Q8TAC9 235 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 MPLKIPQ8TAP9 179 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 ZNF398Q8TD17 642 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 ATP8B4Q8TF62 1192 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 NSMCE1Q8WV22 266 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 SNRNP27Q8WVK2 155 aaKnown RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 UBLCP1Q8WVY7 318 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 MAIP1Q8WWC4 291 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 PRPF31Q8WWY3 499 aaKnown RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 HDAC2Q92769 488 aaKnown RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 CD101Q93033 1021 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 MAGOHBQ96A72 148 aaKnown RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 COQ8BQ96D53 544 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 VCPIP1Q96JH7 1222 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 MAELQ96JY0 434 aaKnown RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 ZBTB45Q96K62 511 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms