RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 SUN1O94901 812 aa23.3■■□□□ 1.32
VARS-217ENST00000440048 MPOP05164 745 aa23.3■■□□□ 1.32
VARS-217ENST00000440048 ALDH4A1P30038 563 aa23.3■■□□□ 1.32
VARS-217ENST00000440048 RPL22P35268 128 aaKnown RBP23.3■■□□□ 1.32
VARS-217ENST00000440048 FASLGP48023 281 aa23.3■■□□□ 1.32
VARS-217ENST00000440048 KCNJ1P48048 391 aa23.3■■□□□ 1.32
VARS-217ENST00000440048 LMAN1P49257 510 aa23.3■■□□□ 1.32
VARS-217ENST00000440048 SEMA5AQ13591 1074 aa23.3■■□□□ 1.32
VARS-217ENST00000440048 SEPT6Q14141 434 aa23.3■■□□□ 1.32
VARS-217ENST00000440048 POU6F1Q14863 301 aa23.3■■□□□ 1.32
VARS-217ENST00000440048 C11orf96Q7Z7L8 435 aa23.3■■□□□ 1.32
VARS-217ENST00000440048 B3GNT8Q7Z7M8 397 aa23.3■■□□□ 1.32
VARS-217ENST00000440048 TRAPPC5Q8IUR0 188 aa23.3■■□□□ 1.32
VARS-217ENST00000440048 RASGEF1AQ8N9B8 481 aa23.3■■□□□ 1.32
VARS-217ENST00000440048 OR52K1Q8NGK4 314 aa23.3■■□□□ 1.32
VARS-217ENST00000440048 DNAJC1Q96KC8 554 aaKnown RBP23.3■■□□□ 1.32
VARS-217ENST00000440048 OSGEPL1Q9H4B0 414 aa23.3■■□□□ 1.32
VARS-217ENST00000440048 PRDM8Q9NQV8 689 aa23.3■■□□□ 1.32
VARS-217ENST00000440048 DNAJC16Q9Y2G8 782 aa23.3■■□□□ 1.32
VARS-217ENST00000440048 NBEAQ8NFP9 2946 aa23.29■■□□□ 1.32
VARS-217ENST00000440048 CELSR3Q9NYQ7 3312 aa23.29■■□□□ 1.32
VARS-217ENST00000440048 A0A1W2PNU3 283 aaPredicted RBP23.29■■□□□ 1.32
VARS-217ENST00000440048 E7EVH7 732 aa23.29■■□□□ 1.32
VARS-217ENST00000440048 CCL22O00626 93 aa23.29■■□□□ 1.32
VARS-217ENST00000440048 BRINP1O60477 761 aa23.29■■□□□ 1.32
VARS-217ENST00000440048 F3P13726 295 aa23.29■■□□□ 1.32
VARS-217ENST00000440048 HADHAP40939 763 aa23.29■■□□□ 1.32
VARS-217ENST00000440048 GPR3P46089 330 aa23.29■■□□□ 1.32
VARS-217ENST00000440048 CTSCP53634 463 aa23.29■■□□□ 1.32
VARS-217ENST00000440048 NFATC2Q13469 925 aa23.29■■□□□ 1.32
VARS-217ENST00000440048 RASGEF1CQ8N431 466 aa23.29■■□□□ 1.32
VARS-217ENST00000440048 PRELID2Q8N945 189 aa23.29■■□□□ 1.32
VARS-217ENST00000440048 PBKQ96KB5 322 aa23.29■■□□□ 1.32
VARS-217ENST00000440048 FOXP3Q9BZS1 431 aa23.29■■□□□ 1.32
VARS-217ENST00000440048 HOMER3Q9NSC5 361 aa23.29■■□□□ 1.32
VARS-217ENST00000440048 PRR19A6NJB7 356 aa23.28■■□□□ 1.32
VARS-217ENST00000440048 SLC2A4P14672 509 aa23.28■■□□□ 1.32
VARS-217ENST00000440048 MSH3P20585 1137 aa23.28■■□□□ 1.32
VARS-217ENST00000440048 LSSP48449 732 aa23.28■■□□□ 1.32
VARS-217ENST00000440048 GABREP78334 506 aa23.28■■□□□ 1.32
VARS-217ENST00000440048 CDH17Q12864 832 aa23.28■■□□□ 1.32
VARS-217ENST00000440048 AMZ1Q400G9 498 aa23.28■■□□□ 1.32
VARS-217ENST00000440048 C3orf38Q5JPI3 329 aa23.28■■□□□ 1.32
VARS-217ENST00000440048 CHCHD2P9Q5T1J5 151 aaPredicted RBP23.28■■□□□ 1.32
VARS-217ENST00000440048 PPP1R21Q6ZMI0 780 aa23.28■■□□□ 1.32
VARS-217ENST00000440048 GSTA5Q7RTV2 222 aa23.28■■□□□ 1.32
VARS-217ENST00000440048 DNAAF3Q8N9W5 541 aa23.28■■□□□ 1.32
VARS-217ENST00000440048 MS4A14Q96JA4 679 aa23.28■■□□□ 1.32
VARS-217ENST00000440048 POLR1BQ9H9Y6 1135 aa23.28■■□□□ 1.32
VARS-217ENST00000440048 NLE1Q9NVX2 485 aaPredicted RBP23.28■■□□□ 1.32
VARS-217ENST00000440048 SATB2Q9UPW6 733 aa23.28■■□□□ 1.32
VARS-217ENST00000440048 RAXQ9Y2V3 346 aa23.28■■□□□ 1.32
VARS-217ENST00000440048 KIR2DS5A0A0G2JLQ3 304 aa23.27■■□□□ 1.32
VARS-217ENST00000440048 A0A0G2JNG1 304 aa23.27■■□□□ 1.32
VARS-217ENST00000440048 AGAP14A8MT82 685 aa23.27■■□□□ 1.32
VARS-217ENST00000440048 KIR2DS3K7RE56 304 aa23.27■■□□□ 1.32
VARS-217ENST00000440048 ZW10O43264 779 aa23.27■■□□□ 1.32
VARS-217ENST00000440048 KIF5CO60282 957 aa23.27■■□□□ 1.32
VARS-217ENST00000440048 AKT1P31749 480 aa23.27■■□□□ 1.32
VARS-217ENST00000440048 GRIA1P42261 906 aa23.27■■□□□ 1.32
VARS-217ENST00000440048 INHBCP55103 352 aa23.27■■□□□ 1.32
VARS-217ENST00000440048 KIR2DS5Q14953 304 aa23.27■■□□□ 1.32
VARS-217ENST00000440048 TMEM220Q6QAJ8 160 aa23.27■■□□□ 1.32
VARS-217ENST00000440048 MICALCLQ6ZW33 695 aa23.27■■□□□ 1.32
VARS-217ENST00000440048 TMPRSS9Q7Z410 1059 aa23.27■■□□□ 1.32
VARS-217ENST00000440048 ZNF761Q86XN6 746 aaPredicted RBP23.27■■□□□ 1.32
VARS-217ENST00000440048 STYXQ8WUJ0 223 aa23.27■■□□□ 1.32
VARS-217ENST00000440048 TMEM74Q96NL1 305 aa23.27■■□□□ 1.32
VARS-217ENST00000440048 FAM96AQ9H5X1 160 aa23.27■■□□□ 1.32
VARS-217ENST00000440048 SARS2Q9NP81 518 aaKnown RBP23.27■■□□□ 1.32
VARS-217ENST00000440048 CRLS1Q9UJA2 301 aa23.27■■□□□ 1.32
VARS-217ENST00000440048 ADAMTS20P59510 1910 aa23.27■■□□□ 1.32
VARS-217ENST00000440048 MROH6A6NGR9 719 aa23.26■■□□□ 1.31
VARS-217ENST00000440048 OR2AG2A6NM03 316 aa23.26■■□□□ 1.31
VARS-217ENST00000440048 OR5K4A6NMS3 321 aa23.26■■□□□ 1.31
VARS-217ENST00000440048 TMX2-CTNND1H3BSU7 103 aa23.26■■□□□ 1.31
VARS-217ENST00000440048 H7C0S8 307 aa23.26■■□□□ 1.31
VARS-217ENST00000440048 APRTP07741 180 aa23.26■■□□□ 1.31
VARS-217ENST00000440048 ITGALP20701 1170 aa23.26■■□□□ 1.31
VARS-217ENST00000440048 CD1CP29017 333 aa23.26■■□□□ 1.31
VARS-217ENST00000440048 CCKBRP32239 447 aa23.26■■□□□ 1.31
VARS-217ENST00000440048 MC4RP32245 332 aa23.26■■□□□ 1.31
VARS-217ENST00000440048 HHEXQ03014 270 aa23.26■■□□□ 1.31
VARS-217ENST00000440048 MAP9Q49MG5 647 aa23.26■■□□□ 1.31
VARS-217ENST00000440048 CCDC38Q502W7 563 aa23.26■■□□□ 1.31
VARS-217ENST00000440048 C4orf22Q6V702 233 aa23.26■■□□□ 1.31
VARS-217ENST00000440048 USP53Q70EK8 1073 aa23.26■■□□□ 1.31
VARS-217ENST00000440048 SNX20Q7Z614 316 aa23.26■■□□□ 1.31
VARS-217ENST00000440048 SLC9B2Q86UD5 537 aa23.26■■□□□ 1.31
VARS-217ENST00000440048 ULK4Q96C45 1275 aa23.26■■□□□ 1.31
VARS-217ENST00000440048 LIN37Q96GY3 246 aaPredicted RBP23.26■■□□□ 1.31
VARS-217ENST00000440048 CDKN2AIPNLQ96HQ2 116 aa23.26■■□□□ 1.31
VARS-217ENST00000440048 RDH14Q9HBH5 336 aa23.26■■□□□ 1.31
VARS-217ENST00000440048 EPB41L5Q9HCM4 733 aa23.26■■□□□ 1.31
VARS-217ENST00000440048 CASS4Q9NQ75 786 aa23.26■■□□□ 1.31
VARS-217ENST00000440048 KCNK4Q9NYG8 393 aa23.26■■□□□ 1.31
VARS-217ENST00000440048 SCHIP1Q9P0W5 487 aaPredicted RBP23.26■■□□□ 1.31
VARS-217ENST00000440048 TTC7AQ9ULT0 858 aaPredicted RBP23.26■■□□□ 1.31
VARS-217ENST00000440048 SLC30A1Q9Y6M5 507 aa23.26■■□□□ 1.31
VARS-217ENST00000440048 IGHV1OR21-1A0A087WYE8 117 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms