RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 WLSQ5T9L3 541 aa11.65□□□□□ -0.55
SMAD3-202ENST00000439724 CLEC6AQ6EIG7 209 aa11.65□□□□□ -0.55
SMAD3-202ENST00000439724 PGM2L1Q6PCE3 622 aa11.65□□□□□ -0.55
SMAD3-202ENST00000439724 LARP4Q71RC2 724 aaKnown RBP eCLIP11.65□□□□□ -0.55
SMAD3-202ENST00000439724 LKAAEAR1Q8TD35 194 aa11.65□□□□□ -0.55
SMAD3-202ENST00000439724 OSCP1Q8WVF1 389 aa11.65□□□□□ -0.55
SMAD3-202ENST00000439724 PBXIP1Q96AQ6 731 aa11.65□□□□□ -0.55
SMAD3-202ENST00000439724 ULK4Q96C45 1275 aa11.65□□□□□ -0.55
SMAD3-202ENST00000439724 C19orf60Q96EN9 201 aa11.65□□□□□ -0.55
SMAD3-202ENST00000439724 KLHL32Q96NJ5 620 aa11.65□□□□□ -0.55
SMAD3-202ENST00000439724 NSUN5Q96P11 429 aaKnown RBP11.65□□□□□ -0.55
SMAD3-202ENST00000439724 LRRC3BQ96PB8 259 aa11.65□□□□□ -0.55
SMAD3-202ENST00000439724 CIPCQ9C0C6 399 aa11.65□□□□□ -0.55
SMAD3-202ENST00000439724 EBF2Q9HAK2 575 aa11.65□□□□□ -0.55
SMAD3-202ENST00000439724 LATS2Q9NRM7 1088 aa11.65□□□□□ -0.55
SMAD3-202ENST00000439724 DUS2Q9NX74 493 aaKnown RBP11.65□□□□□ -0.55
SMAD3-202ENST00000439724 ZDHHC3Q9NYG2 299 aa11.65□□□□□ -0.55
SMAD3-202ENST00000439724 NOP53Q9NZM5 478 aaKnown RBP11.65□□□□□ -0.55
SMAD3-202ENST00000439724 KLHL42Q9P2K6 505 aa11.65□□□□□ -0.55
SMAD3-202ENST00000439724 B4GALT6Q9UBX8 382 aa11.65□□□□□ -0.55
SMAD3-202ENST00000439724 NKX1-2Q9UD57 310 aaPredicted RBP11.65□□□□□ -0.55
SMAD3-202ENST00000439724 SLC7A8Q9UHI5 535 aa11.65□□□□□ -0.55
SMAD3-202ENST00000439724 PCTPQ9UKL6 214 aa11.65□□□□□ -0.55
SMAD3-202ENST00000439724 SLC8A2Q9UPR5 921 aa11.65□□□□□ -0.55
SMAD3-202ENST00000439724 PRSS21Q9Y6M0 314 aa11.65□□□□□ -0.55
SMAD3-202ENST00000439724 WASF2Q9Y6W5 498 aa11.65□□□□□ -0.55
SMAD3-202ENST00000439724 IGLV3-16A0A075B6K0 115 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 A8MX80 341 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 UBDO15205 165 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 SNX2O60749 519 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 MLYCDO95822 493 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 ADH1CP00326 375 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 CYP2A6P11509 494 aaPredicted RBP11.64□□□□□ -0.55
SMAD3-202ENST00000439724 ADH5P11766 374 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 DGKAP23743 735 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 NSG1P42857 185 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 SPINT3P49223 89 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 DGKGP49619 791 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 CDC16Q13042 620 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 TGFBIQ15582 683 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 DUSP6Q16828 381 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 EML3Q32P44 896 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 PREPLQ4J6C6 727 aaPredicted RBP11.64□□□□□ -0.55
SMAD3-202ENST00000439724 KHDC1Q4VXA5 237 aaKnown RBP11.64□□□□□ -0.55
SMAD3-202ENST00000439724 FAM109BQ6ICB4 259 aaPredicted RBP11.64□□□□□ -0.55
SMAD3-202ENST00000439724 EFL1Q7Z2Z2 1120 aaKnown RBP11.64□□□□□ -0.55
SMAD3-202ENST00000439724 RBM23Q86U06 439 aaKnown RBP11.64□□□□□ -0.55
SMAD3-202ENST00000439724 ZBTB2Q8N680 514 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 NAT16Q8N8M0 369 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 DTX3LQ8TDB6 740 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 TRPC4APQ8TEL6 797 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 RSPRY1Q96DX4 576 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 LRIG1Q96JA1 1093 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 CLPTM1LQ96KA5 538 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 NUSAP1Q9BXS6 441 aaKnown RBP11.64□□□□□ -0.55
SMAD3-202ENST00000439724 NDE1Q9NXR1 346 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 PKD2L2Q9NZM6 624 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 CD274Q9NZQ7 290 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 NFKBIL1Q9UBC1 381 aaPredicted RBP11.64□□□□□ -0.55
SMAD3-202ENST00000439724 G3BP2Q9UN86 482 aaKnown RBP11.64□□□□□ -0.55
SMAD3-202ENST00000439724 SLC27A6Q9Y2P4 619 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 DNAJC15Q9Y5T4 150 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 PLXNA2O75051 1894 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 KIF26AQ9ULI4 1882 aaPredicted RBP11.64□□□□□ -0.55
SMAD3-202ENST00000439724 C2orf16Q68DN1 1984 aa11.64□□□□□ -0.55
SMAD3-202ENST00000439724 TTC34A8MYJ7 566 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 UPK3BL1B0FP48 263 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 UPK3BL2E5RIL1 263 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 PPP6CO00743 305 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 TRIM24O15164 1050 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 SLC25A14O95258 325 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-202ENST00000439724 PSMG1O95456 288 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 GNAZP19086 355 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 NFKBIAP25963 317 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 VIPR1P32241 457 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 CCNG1P51959 295 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 DCDC1P59894 354 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 ACTR3P61158 418 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 TBL3Q12788 808 aaKnown RBP11.63□□□□□ -0.55
SMAD3-202ENST00000439724 PTK2BQ14289 1009 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 E2F5Q15329 346 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 PCBP2Q15366 365 aaKnown RBP eCLIP11.63□□□□□ -0.552e-6■■■■■ 27.4
SMAD3-202ENST00000439724 MAPRE2Q15555 327 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 C9orf50Q5SZB4 431 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 GPRC6AQ5T6X5 926 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 SBSNQ6UWP8 590 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 C16orf89Q6UX73 402 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 RIPOR1Q6ZS17 1223 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 DEFB107AQ8IZN7 70 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 MYO1HQ8N1T3 1032 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 CLDN19Q8N6F1 224 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 PDPRQ8NCN5 879 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 OR56A4Q8NGH8 313 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 HCAR2Q8TDS4 363 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 CYB5D2Q8WUJ1 264 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 TWIST2Q8WVJ9 160 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 MARK4Q96L34 752 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 PANX3Q96QZ0 392 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 LMAN2LQ9H0V9 348 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 SFXN1Q9H9B4 322 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms