RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 CRIM1Q9NZV1 1036 aa10.84□□□□□ -0.67
RTN4-211ENST00000438462 EPHA6Q9UF33 1036 aa10.84□□□□□ -0.67
RTN4-211ENST00000438462 PRKAB1Q9Y478 270 aa10.84□□□□□ -0.67
RTN4-211ENST00000438462 DYSFO75923 2080 aa10.84□□□□□ -0.67
RTN4-211ENST00000438462 SPTBP11277 2137 aa10.84□□□□□ -0.67
RTN4-211ENST00000438462 A8MX80 341 aa10.83□□□□□ -0.68
RTN4-211ENST00000438462 CLDN4O14493 209 aa10.83□□□□□ -0.68
RTN4-211ENST00000438462 DDX3YO15523 660 aaKnown RBP10.83□□□□□ -0.68
RTN4-211ENST00000438462 SART1O43290 800 aaKnown RBP10.83□□□□□ -0.68
RTN4-211ENST00000438462 TMCC1O94876 653 aa10.83□□□□□ -0.68
RTN4-211ENST00000438462 LCA5LO95447 670 aa10.83□□□□□ -0.68
RTN4-211ENST00000438462 UMODP07911 640 aa10.83□□□□□ -0.68
RTN4-211ENST00000438462 PVRP15151 417 aa10.83□□□□□ -0.68
RTN4-211ENST00000438462 CFPP27918 469 aa10.83□□□□□ -0.68
RTN4-211ENST00000438462 KIR2DL3P43628 341 aa10.83□□□□□ -0.68
RTN4-211ENST00000438462 GEMIN4P57678 1058 aaKnown RBP10.83□□□□□ -0.68
RTN4-211ENST00000438462 SNRPFP62306 86 aaKnown RBP10.83□□□□□ -0.68
RTN4-211ENST00000438462 C1orf220Q5T0J3 134 aa10.83□□□□□ -0.68
RTN4-211ENST00000438462 CHST15Q7LFX5 561 aaPredicted RBP10.83□□□□□ -0.68
RTN4-211ENST00000438462 CCDC71Q8IV32 467 aaPredicted RBP10.83□□□□□ -0.68
RTN4-211ENST00000438462 CCDC65Q8IXS2 484 aa10.83□□□□□ -0.68
RTN4-211ENST00000438462 DRC7Q8IY82 874 aa10.83□□□□□ -0.68
RTN4-211ENST00000438462 CCDC150Q8NCX0 1101 aa10.83□□□□□ -0.68
RTN4-211ENST00000438462 EXOC2Q96KP1 924 aa10.83□□□□□ -0.68
RTN4-211ENST00000438462 PLEKHG4BQ96PX9 1271 aa10.83□□□□□ -0.68
RTN4-211ENST00000438462 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.83□□□□□ -0.685e-12■■□□□ 11.4
RTN4-211ENST00000438462 PLEKHF2Q9H8W4 249 aa10.83□□□□□ -0.68
RTN4-211ENST00000438462 SEPT11Q9NVA2 429 aaKnown RBP10.83□□□□□ -0.68
RTN4-211ENST00000438462 ZNF212Q9UDV6 495 aa10.83□□□□□ -0.68
RTN4-211ENST00000438462 CBLCQ9ULV8 474 aa10.83□□□□□ -0.68
RTN4-211ENST00000438462 MFHAS1Q9Y4C4 1052 aa10.83□□□□□ -0.68
RTN4-211ENST00000438462 CCDC66A2RUB6 948 aa10.82□□□□□ -0.68
RTN4-211ENST00000438462 PRRG2O14669 202 aa10.82□□□□□ -0.68
RTN4-211ENST00000438462 FAM157CP0CG43 387 aa10.82□□□□□ -0.68
RTN4-211ENST00000438462 ZNF30P17039 623 aa10.82□□□□□ -0.68
RTN4-211ENST00000438462 AGXTP21549 392 aa10.82□□□□□ -0.68
RTN4-211ENST00000438462 CHRNA4P43681 627 aa10.82□□□□□ -0.68
RTN4-211ENST00000438462 HSD11B2P80365 405 aa10.82□□□□□ -0.68
RTN4-211ENST00000438462 HSF1Q00613 529 aa10.82□□□□□ -0.68
RTN4-211ENST00000438462 PLCL1Q15111 1095 aa10.82□□□□□ -0.68
RTN4-211ENST00000438462 RILPL1Q5EBL4 403 aa10.82□□□□□ -0.68
RTN4-211ENST00000438462 ZNF385CQ66K41 422 aaPredicted RBP10.82□□□□□ -0.68
RTN4-211ENST00000438462 BRAT1Q6PJG6 821 aa10.82□□□□□ -0.68
RTN4-211ENST00000438462 B4GALNT4Q76KP1 1039 aa10.82□□□□□ -0.68
RTN4-211ENST00000438462 KMT5CQ86Y97 462 aa10.82□□□□□ -0.68
RTN4-211ENST00000438462 TRIM48Q8IWZ4 208 aa10.82□□□□□ -0.68
RTN4-211ENST00000438462 LRRC75A-AS1Q8N1F1 130 aa10.82□□□□□ -0.68
RTN4-211ENST00000438462 PIP4P2Q8N4L2 257 aa10.82□□□□□ -0.68
RTN4-211ENST00000438462 HCAR2Q8TDS4 363 aa10.82□□□□□ -0.68
RTN4-211ENST00000438462 HSFY1Q96LI6 401 aa10.82□□□□□ -0.68
RTN4-211ENST00000438462 DPH2Q9BQC3 489 aaPredicted RBP10.82□□□□□ -0.68
RTN4-211ENST00000438462 SLC7A5P2Q9GIP4 190 aa10.82□□□□□ -0.68
RTN4-211ENST00000438462 SUV39H2Q9H5I1 410 aa10.82□□□□□ -0.68
RTN4-211ENST00000438462 SAMSN1Q9NSI8 373 aaKnown RBP10.82□□□□□ -0.68
RTN4-211ENST00000438462 GPN3Q9UHW5 284 aaPredicted RBP10.82□□□□□ -0.68
RTN4-211ENST00000438462 CPAMD8Q8IZJ3 1885 aa10.82□□□□□ -0.68
RTN4-211ENST00000438462 CXorf51AA0A1B0GTR3 108 aa10.81□□□□□ -0.68
RTN4-211ENST00000438462 OR5K4A6NMS3 321 aa10.81□□□□□ -0.68
RTN4-211ENST00000438462 SMPD2O60906 423 aa10.81□□□□□ -0.68
RTN4-211ENST00000438462 DNAJC6O75061 913 aa10.81□□□□□ -0.68
RTN4-211ENST00000438462 CNOT3O75175 753 aaKnown RBP10.81□□□□□ -0.68
RTN4-211ENST00000438462 VIPP01282 170 aa10.81□□□□□ -0.68
RTN4-211ENST00000438462 ERBB2P04626 1255 aa10.81□□□□□ -0.68
RTN4-211ENST00000438462 VDRP11473 427 aa10.81□□□□□ -0.68
RTN4-211ENST00000438462 ACP5P13686 325 aa10.81□□□□□ -0.68
RTN4-211ENST00000438462 CYP2A7P20853 494 aa10.81□□□□□ -0.68
RTN4-211ENST00000438462 LONP1P36776 959 aaKnown RBP10.81□□□□□ -0.68
RTN4-211ENST00000438462 GCLMP48507 274 aa10.81□□□□□ -0.68
RTN4-211ENST00000438462 RHOAP61586 193 aa10.81□□□□□ -0.68
RTN4-211ENST00000438462 NME3Q13232 169 aa10.81□□□□□ -0.68
RTN4-211ENST00000438462 MTA1Q13330 715 aa10.81□□□□□ -0.68
RTN4-211ENST00000438462 KRTCAP3Q53RY4 240 aa10.81□□□□□ -0.68
RTN4-211ENST00000438462 AFMIDQ63HM1 303 aa10.81□□□□□ -0.68
RTN4-211ENST00000438462 LCLAT1Q6UWP7 414 aa10.81□□□□□ -0.68
RTN4-211ENST00000438462 PRSS57Q6UWY2 283 aa10.81□□□□□ -0.68
RTN4-211ENST00000438462 C11orf96Q7Z7L8 435 aa10.81□□□□□ -0.68
RTN4-211ENST00000438462 NLRP8Q86W28 1048 aa10.81□□□□□ -0.68
RTN4-211ENST00000438462 PTERQ96BW5 349 aa10.81□□□□□ -0.68
RTN4-211ENST00000438462 COQ10AQ96MF6 247 aa10.81□□□□□ -0.68
RTN4-211ENST00000438462 KCTD15Q96SI1 283 aaPredicted RBP10.81□□□□□ -0.68
RTN4-211ENST00000438462 RAB33BQ9H082 229 aa10.81□□□□□ -0.68
RTN4-211ENST00000438462 MMRN2Q9H8L6 949 aa10.81□□□□□ -0.68
RTN4-211ENST00000438462 SCHIP1Q9P0W5 487 aaPredicted RBP10.81□□□□□ -0.68
RTN4-211ENST00000438462 NOCTQ9UK39 431 aaKnown RBP10.81□□□□□ -0.68
RTN4-211ENST00000438462 BIRC6Q9NR09 4857 aa10.81□□□□□ -0.68
RTN4-211ENST00000438462 NPIPA5E9PKD4 350 aa10.8□□□□□ -0.68
RTN4-211ENST00000438462 I6L893 689 aaPredicted RBP10.8□□□□□ -0.68
RTN4-211ENST00000438462 YWHAZP63104 245 aaKnown RBP10.8□□□□□ -0.68
RTN4-211ENST00000438462 CDK17Q00537 523 aa10.8□□□□□ -0.68
RTN4-211ENST00000438462 CEBPZQ03701 1054 aaKnown RBP10.8□□□□□ -0.68
RTN4-211ENST00000438462 PAK1Q13153 545 aa10.8□□□□□ -0.68
RTN4-211ENST00000438462 SLC9A5Q14940 896 aa10.8□□□□□ -0.68
RTN4-211ENST00000438462 ANKRD1Q15327 319 aa10.8□□□□□ -0.68
RTN4-211ENST00000438462 ZNF789Q5FWF6 425 aa10.8□□□□□ -0.68
RTN4-211ENST00000438462 LRRC31Q6UY01 552 aa10.8□□□□□ -0.68
RTN4-211ENST00000438462 DPPA4Q7L190 304 aa10.8□□□□□ -0.68
RTN4-211ENST00000438462 ZNF354CQ86Y25 554 aa10.8□□□□□ -0.68
RTN4-211ENST00000438462 CHERPQ8IWX8 916 aaKnown RBP10.8□□□□□ -0.68
RTN4-211ENST00000438462 TFAP2BQ92481 460 aa10.8□□□□□ -0.68
RTN4-211ENST00000438462 SNX21Q969T3 373 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms