RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 PLA2G16P53816 162 aa16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 INTS11Q5TA45 600 aaKnown RBP16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 RNF145Q96MT1 663 aa16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 PRICKLE1Q96MT3 831 aaPredicted RBP16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 POLR3HQ9Y535 204 aaPredicted RBP16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 LAMB4A4D0S4 1761 aa16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 ZNF132P52740 706 aa16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 TCEAL5Q5H9L2 206 aa16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 PRMT9Q6P2P2 845 aa16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 NIPA2Q8N8Q9 360 aa16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 IGSF9Q9P2J2 1179 aa16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 AXIN1O15169 862 aa16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 POP7O75817 140 aaKnown RBP16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 PSMA3P25788 255 aa16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 SEPHS1P49903 392 aa16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 POMZP3Q6PJE2 187 aa16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 MECRQ9BV79 373 aa16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 NOL11Q9H8H0 719 aaKnown RBP16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 ZDHHC7Q9NXF8 308 aa16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 SETD1AO15047 1707 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 A0A1W2PPM1 405 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 C9J4A7 227 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 HLA-DQA2P01906 255 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 AVPR1BP47901 424 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 BST1Q10588 318 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 SIRPB2Q5JXA9 342 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 MED27Q6P2C8 311 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 RPAINQ86UA6 219 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 ACTRT2Q8TDY3 377 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 LRRC15Q8TF66 581 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 AZIN2Q96A70 460 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 MAT2BQ9NZL9 334 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 TMEM216Q9P0N5 145 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 ABI3Q9P2A4 366 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 ANKRD66B4E2M5 251 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 SLC7A4O43246 635 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 STC2O76061 302 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 METTL18O95568 372 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 JMJD7P0C870 316 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 MLLT3P42568 568 aaPredicted RBP16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 SLC13A2Q13183 592 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 GPR33Q49SQ1 333 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 PPM1JQ5JR12 505 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 ERN2Q76MJ5 926 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 ESAMQ96AP7 390 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 EXOSC8Q96B26 276 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 CNPPD1Q9BV87 410 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 LMAN2LQ9H0V9 348 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 HCAR3P49019 387 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 MLIPQ5VWP3 458 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 KBTBD6Q86V97 674 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 MRPL43Q8N983 215 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 LRRC57Q8N9N7 239 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 RDH11Q8TC12 318 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 LMAN1LQ9HAT1 526 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 MKL2Q9ULH7 1088 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 PKD1L3Q7Z443 1732 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 KRT75O95678 551 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 TYRP1P17643 537 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 CD72P21854 359 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 TCEA1P23193 301 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 PXNP49023 591 aaPredicted RBP16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 TCHHL1Q5QJ38 904 aaPredicted RBP16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 RASGEF1CQ8N431 466 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 TMEM145Q8NBT3 493 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 PMEPA1Q969W9 287 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 B4GALT6Q9UBX8 382 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 VPS4AQ9UN37 437 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 ERVK-11Q9UQG0 969 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 TIMM22Q9Y584 194 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 HCFC2Q9Y5Z7 792 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 GON4LQ3T8J9 2241 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 CLDN9O95484 217 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 TFPIP10646 304 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 NRLP54845 237 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 FASTKD3Q14CZ7 662 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 OTUD3Q5T2D3 398 aaPredicted RBP16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 DHFR2Q86XF0 187 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 NELL1Q92832 810 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 ARHGAP9Q9BRR9 750 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 NUSAP1Q9BXS6 441 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 KLHL25Q9H0H3 589 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 MRTO4Q9UKD2 239 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 CCDC88AQ3V6T2 1871 aa16.92■□□□□ 0.3
SMARCA4-203ENST00000429416 TRBC1P01850 177 aa16.91■□□□□ 0.3
SMARCA4-203ENST00000429416 EPHA3P29320 983 aa16.91■□□□□ 0.3
SMARCA4-203ENST00000429416 NTSR1P30989 418 aa16.91■□□□□ 0.3
SMARCA4-203ENST00000429416 CYP4F3Q08477 520 aa16.91■□□□□ 0.3
SMARCA4-203ENST00000429416 ZNF460Q14592 562 aa16.91■□□□□ 0.3
SMARCA4-203ENST00000429416 MARCH8Q5T0T0 291 aa16.91■□□□□ 0.3
SMARCA4-203ENST00000429416 KIAA0408Q6ZU52 694 aa16.91■□□□□ 0.3
SMARCA4-203ENST00000429416 DNAJB14Q8TBM8 379 aa16.91■□□□□ 0.3
SMARCA4-203ENST00000429416 TMEM248Q9NWD8 314 aa16.91■□□□□ 0.3
SMARCA4-203ENST00000429416 ZDHHC3Q9NYG2 299 aa16.91■□□□□ 0.3
SMARCA4-203ENST00000429416 VARSP26640 1264 aaKnown RBP16.91■□□□□ 0.3
SMARCA4-203ENST00000429416 TSNQ15631 228 aaKnown RBP16.91■□□□□ 0.3
SMARCA4-203ENST00000429416 DEPDC1Q5TB30 811 aa16.91■□□□□ 0.3
SMARCA4-203ENST00000429416 ROGDIQ9GZN7 287 aa16.91■□□□□ 0.3
SMARCA4-203ENST00000429416 SUCOQ9UBS9 1254 aaKnown RBP16.91■□□□□ 0.3
SMARCA4-203ENST00000429416 RFXANKO14593 260 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms