RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 GPBAR1Q8TDU6 330 aa24.17■■□□□ 1.46
VEGFA-209ENST00000425836 LRRC39Q96DD0 335 aa24.17■■□□□ 1.46
VEGFA-209ENST00000425836 CAMK1GQ96NX5 476 aa24.17■■□□□ 1.46
VEGFA-209ENST00000425836 EPB41L5Q9HCM4 733 aa24.17■■□□□ 1.46
VEGFA-209ENST00000425836 ST14Q9Y5Y6 855 aa24.17■■□□□ 1.46
VEGFA-209ENST00000425836 IGLV3-16A0A075B6K0 115 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 E7ESA3 106 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 LMO7DNF2Z398 122 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 YY2O15391 372 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 PAMP19021 973 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 CTBSQ01459 385 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 PDIA2Q13087 525 aaKnown RBP24.16■■□□□ 1.46
VEGFA-209ENST00000425836 SEMA3AQ14563 771 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 DEFB133Q30KQ1 61 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 NRROSQ86YC3 692 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 EID2Q8N6I1 236 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 HEXDCQ8WVB3 486 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.16■■□□□ 1.467e-6■■■■■ 27.5
VEGFA-209ENST00000425836 DCUN1D1Q96GG9 259 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 NAT9Q9BTE0 207 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 BOCQ9BWV1 1114 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 CATSPERZQ9NTU4 200 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 MARCH4Q9P2E8 410 aaPredicted RBP24.16■■□□□ 1.46
VEGFA-209ENST00000425836 TEX264Q9Y6I9 313 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 TRIM38O00635 465 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 CD3EAPO15446 510 aaKnown RBP24.16■■□□□ 1.46
VEGFA-209ENST00000425836 POLBP06746 335 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 CTSCP53634 463 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 CRTC3Q6UUV7 619 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 TAF8Q7Z7C8 310 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 LRRTM4Q86VH4 590 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 GKN2Q86XP6 184 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 SDR16C5Q8N3Y7 309 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 OR4C6Q8NH72 309 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 RHBDD1Q8TEB9 315 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 NAT14Q8WUY8 206 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 SGF29Q96ES7 293 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 NLGN3Q9NZ94 848 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 PCOLCE2Q9UKZ9 415 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 CHMP2BQ9UQN3 213 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 FAM169AQ9Y6X4 670 aa24.16■■□□□ 1.46
VEGFA-209ENST00000425836 ZNF106Q9H2Y7 1883 aaKnown RBP24.15■■□□□ 1.46
VEGFA-209ENST00000425836 BPTFQ12830 3046 aa24.15■■□□□ 1.46
VEGFA-209ENST00000425836 GOLGA8KD6RF30 607 aa24.15■■□□□ 1.46
VEGFA-209ENST00000425836 GOLGA8TH3BQL2 631 aa24.15■■□□□ 1.46
VEGFA-209ENST00000425836 TPP1O14773 563 aa24.15■■□□□ 1.46
VEGFA-209ENST00000425836 CBFA2T3O75081 653 aa24.15■■□□□ 1.46
VEGFA-209ENST00000425836 ANXA6P08133 673 aa24.15■■□□□ 1.46
VEGFA-209ENST00000425836 RALBP11234 206 aa24.15■■□□□ 1.46
VEGFA-209ENST00000425836 SDHBP21912 280 aa24.15■■□□□ 1.46
VEGFA-209ENST00000425836 AK4P27144 223 aaPredicted RBP24.15■■□□□ 1.46
VEGFA-209ENST00000425836 ILF3Q12906 894 aaKnown RBP eCLIP24.15■■□□□ 1.46
VEGFA-209ENST00000425836 LRP8Q14114 963 aa24.15■■□□□ 1.46
VEGFA-209ENST00000425836 SMAD1Q15797 465 aaKnown RBP24.15■■□□□ 1.46
VEGFA-209ENST00000425836 INAVAQ3KP66 663 aa24.15■■□□□ 1.46
VEGFA-209ENST00000425836 LYPLAL1Q5VWZ2 237 aa24.15■■□□□ 1.46
VEGFA-209ENST00000425836 TMEM220Q6QAJ8 160 aa24.15■■□□□ 1.46
VEGFA-209ENST00000425836 CERS6Q6ZMG9 384 aa24.15■■□□□ 1.46
VEGFA-209ENST00000425836 DET1Q7L5Y6 550 aa24.15■■□□□ 1.46
VEGFA-209ENST00000425836 CHST15Q7LFX5 561 aaPredicted RBP24.15■■□□□ 1.46
VEGFA-209ENST00000425836 LDB1Q86U70 411 aaPredicted RBP24.15■■□□□ 1.46
VEGFA-209ENST00000425836 TRAPPC5Q8IUR0 188 aa24.15■■□□□ 1.46
VEGFA-209ENST00000425836 CCNJLQ8IV13 435 aa24.15■■□□□ 1.46
VEGFA-209ENST00000425836 GSDMCQ9BYG8 508 aa24.15■■□□□ 1.46
VEGFA-209ENST00000425836 PLAC1Q9HBJ0 212 aa24.15■■□□□ 1.46
VEGFA-209ENST00000425836 ZDHHC18Q9NUE0 388 aa24.15■■□□□ 1.46
VEGFA-209ENST00000425836 IL1RAPL1Q9NZN1 696 aa24.15■■□□□ 1.46
VEGFA-209ENST00000425836 OR2AG2A6NM03 316 aa24.14■■□□□ 1.45
VEGFA-209ENST00000425836 CFAP99D6REC4 459 aa24.14■■□□□ 1.45
VEGFA-209ENST00000425836 KMOO15229 486 aa24.14■■□□□ 1.45
VEGFA-209ENST00000425836 SGTAO43765 313 aa24.14■■□□□ 1.45
VEGFA-209ENST00000425836 TTC4O95801 387 aa24.14■■□□□ 1.45
VEGFA-209ENST00000425836 ACP5P13686 325 aa24.14■■□□□ 1.45
VEGFA-209ENST00000425836 ITIH4Q14624 930 aa24.14■■□□□ 1.45
VEGFA-209ENST00000425836 CRYMQ14894 314 aa24.14■■□□□ 1.45
VEGFA-209ENST00000425836 FASTKD3Q14CZ7 662 aaKnown RBP24.14■■□□□ 1.45
VEGFA-209ENST00000425836 LVRNQ6Q4G3 990 aa24.14■■□□□ 1.45
VEGFA-209ENST00000425836 CENPUQ71F23 418 aa24.14■■□□□ 1.45
VEGFA-209ENST00000425836 ANKMY2Q8IV38 441 aa24.14■■□□□ 1.45
VEGFA-209ENST00000425836 FAM114A2Q9NRY5 505 aa24.14■■□□□ 1.45
VEGFA-209ENST00000425836 SLC23A2Q9UGH3 650 aa24.14■■□□□ 1.45
VEGFA-209ENST00000425836 ZC3H7BQ9UGR2 993 aaKnown RBP24.14■■□□□ 1.45
VEGFA-209ENST00000425836 GPR34Q9UPC5 381 aa24.14■■□□□ 1.45
VEGFA-209ENST00000425836 DOLKQ9UPQ8 538 aa24.14■■□□□ 1.45
VEGFA-209ENST00000425836 TP53BP1Q12888 1972 aaPredicted RBP24.13■■□□□ 1.45
VEGFA-209ENST00000425836 SIGLEC6O43699 453 aa24.13■■□□□ 1.45
VEGFA-209ENST00000425836 ATP1B2P14415 290 aaPredicted RBP24.13■■□□□ 1.45
VEGFA-209ENST00000425836 LONRF1Q17RB8 773 aa24.13■■□□□ 1.45
VEGFA-209ENST00000425836 AARS2Q5JTZ9 985 aaKnown RBP24.13■■□□□ 1.45
VEGFA-209ENST00000425836 NEPROQ6NW34 567 aa24.13■■□□□ 1.45
VEGFA-209ENST00000425836 C11orf96Q7Z7L8 435 aa24.13■■□□□ 1.45
VEGFA-209ENST00000425836 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.13■■□□□ 1.456e-6■■■■■ 47.7
VEGFA-209ENST00000425836 FBXO36Q8NEA4 188 aa24.13■■□□□ 1.45
VEGFA-209ENST00000425836 ZNF514Q96K75 400 aaPredicted RBP24.13■■□□□ 1.45
VEGFA-209ENST00000425836 TTC1Q99614 292 aa24.13■■□□□ 1.45
VEGFA-209ENST00000425836 RTKNQ9BST9 563 aa24.13■■□□□ 1.45
VEGFA-209ENST00000425836 DUSP23Q9BVJ7 150 aa24.13■■□□□ 1.45
VEGFA-209ENST00000425836 EIF3HO15372 352 aaKnown RBP eCLIP24.12■■□□□ 1.455e-7■■□□□ 13.4
VEGFA-209ENST00000425836 OR1I1O60431 355 aa24.12■■□□□ 1.45
VEGFA-209ENST00000425836 ALPPL2P10696 532 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms