RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 GRM2Q14416 872 aa26.21■■□□□ 1.79
LDB1-202ENST00000425280 TIFAQ96CG3 184 aa26.21■■□□□ 1.79
LDB1-202ENST00000425280 TBC1D10AQ9BXI6 508 aa26.21■■□□□ 1.79
LDB1-202ENST00000425280 TRIM16O95361 564 aa26.21■■□□□ 1.79
LDB1-202ENST00000425280 TSPAN8P19075 237 aa26.21■■□□□ 1.79
LDB1-202ENST00000425280 NCF2P19878 526 aaPredicted RBP26.21■■□□□ 1.79
LDB1-202ENST00000425280 METTL21CQ5VZV1 264 aa26.21■■□□□ 1.79
LDB1-202ENST00000425280 CYB5D1Q6P9G0 228 aa26.21■■□□□ 1.79
LDB1-202ENST00000425280 CPA6Q8N4T0 437 aa26.21■■□□□ 1.79
LDB1-202ENST00000425280 ULK4Q96C45 1275 aa26.21■■□□□ 1.79
LDB1-202ENST00000425280 TAGLN3Q9UI15 199 aa26.21■■□□□ 1.79
LDB1-202ENST00000425280 SARDHQ9UL12 918 aa26.21■■□□□ 1.79
LDB1-202ENST00000425280 TMPRSS11EQ9UL52 423 aa26.21■■□□□ 1.79
LDB1-202ENST00000425280 C5orf42Q9H799 3197 aa26.2■■□□□ 1.79
LDB1-202ENST00000425280 REV3LO60673 3130 aa26.2■■□□□ 1.78
LDB1-202ENST00000425280 KLK8O60259 260 aa26.2■■□□□ 1.78
LDB1-202ENST00000425280 XPAP23025 273 aaPredicted RBP26.2■■□□□ 1.78
LDB1-202ENST00000425280 NFKBIAP25963 317 aa26.2■■□□□ 1.78
LDB1-202ENST00000425280 OPRD1P41143 372 aa26.2■■□□□ 1.78
LDB1-202ENST00000425280 NSG1P42857 185 aa26.2■■□□□ 1.78
LDB1-202ENST00000425280 B4GALNT1Q00973 533 aa26.2■■□□□ 1.78
LDB1-202ENST00000425280 RALGDSQ12967 914 aa26.2■■□□□ 1.78
LDB1-202ENST00000425280 RUNX3Q13761 415 aa26.2■■□□□ 1.78
LDB1-202ENST00000425280 HNRNPA1L2Q32P51 320 aaKnown RBP26.2■■□□□ 1.78
LDB1-202ENST00000425280 LSM12Q3MHD2 195 aaKnown RBP26.2■■□□□ 1.78
LDB1-202ENST00000425280 RINLQ6ZS11 566 aa26.2■■□□□ 1.78
LDB1-202ENST00000425280 DPPA4Q7L190 304 aa26.2■■□□□ 1.78
LDB1-202ENST00000425280 TERB1Q8NA31 727 aa26.2■■□□□ 1.78
LDB1-202ENST00000425280 COPS8Q99627 209 aa26.2■■□□□ 1.78
LDB1-202ENST00000425280 ABCG8Q9H221 673 aa26.2■■□□□ 1.78
LDB1-202ENST00000425280 CDYLQ9Y232 598 aa26.2■■□□□ 1.78
LDB1-202ENST00000425280 CCDC85CA6NKD9 419 aa26.19■■□□□ 1.78
LDB1-202ENST00000425280 CDH13P55290 713 aa26.19■■□□□ 1.78
LDB1-202ENST00000425280 ATAT1Q5SQI0 421 aa26.19■■□□□ 1.78
LDB1-202ENST00000425280 C9orf64Q5T6V5 341 aa26.19■■□□□ 1.78
LDB1-202ENST00000425280 PARS2Q7L3T8 475 aaKnown RBP26.19■■□□□ 1.78
LDB1-202ENST00000425280 GPSM1Q86YR5 675 aa26.19■■□□□ 1.78
LDB1-202ENST00000425280 FAR2Q96K12 515 aa26.19■■□□□ 1.78
LDB1-202ENST00000425280 RAB3IPQ96QF0 476 aaPredicted RBP26.19■■□□□ 1.78
LDB1-202ENST00000425280 MIPEPQ99797 713 aa26.19■■□□□ 1.78
LDB1-202ENST00000425280 BTBD10Q9BSF8 475 aa26.19■■□□□ 1.78
LDB1-202ENST00000425280 STK38LQ9Y2H1 464 aa26.19■■□□□ 1.78
LDB1-202ENST00000425280 IGLV3-16A0A075B6K0 115 aa26.19■■□□□ 1.78
LDB1-202ENST00000425280 EDDM13A0A1B0GTR0 161 aa26.19■■□□□ 1.78
LDB1-202ENST00000425280 HK3P52790 923 aa26.19■■□□□ 1.78
LDB1-202ENST00000425280 ADAM15Q13444 863 aa26.19■■□□□ 1.78
LDB1-202ENST00000425280 ZNF234Q14588 700 aa26.19■■□□□ 1.78
LDB1-202ENST00000425280 GPRC6AQ5T6X5 926 aa26.19■■□□□ 1.78
LDB1-202ENST00000425280 ACAD11Q709F0 780 aa26.19■■□□□ 1.78
LDB1-202ENST00000425280 KXD1Q9BQD3 176 aa26.19■■□□□ 1.78
LDB1-202ENST00000425280 SPATA16Q9BXB7 569 aa26.19■■□□□ 1.78
LDB1-202ENST00000425280 CLEC1BQ9P126 229 aa26.19■■□□□ 1.78
LDB1-202ENST00000425280 FIS1Q9Y3D6 152 aa26.19■■□□□ 1.78
LDB1-202ENST00000425280 TCF20Q9UGU0 1960 aaKnown RBP26.18■■□□□ 1.78
LDB1-202ENST00000425280 TRPC5OSA6NMA1 111 aa26.18■■□□□ 1.78
LDB1-202ENST00000425280 KPNA3O00505 521 aaPredicted RBP26.18■■□□□ 1.78
LDB1-202ENST00000425280 EEF1DP29692 281 aaKnown RBP26.18■■□□□ 1.78
LDB1-202ENST00000425280 GJA4P35212 333 aa26.18■■□□□ 1.78
LDB1-202ENST00000425280 CPA2P48052 419 aa26.18■■□□□ 1.78
LDB1-202ENST00000425280 Q6ZVL8 140 aa26.18■■□□□ 1.78
LDB1-202ENST00000425280 YAF2Q8IY57 180 aa26.18■■□□□ 1.78
LDB1-202ENST00000425280 NSUN5Q96P11 429 aaKnown RBP26.18■■□□□ 1.78
LDB1-202ENST00000425280 CCDC28BQ9BUN5 200 aa26.18■■□□□ 1.78
LDB1-202ENST00000425280 FAM83DQ9H4H8 585 aa26.18■■□□□ 1.78
LDB1-202ENST00000425280 TSR3Q9UJK0 312 aaKnown RBP26.18■■□□□ 1.78
LDB1-202ENST00000425280 NCF1BA6NI72 391 aaPredicted RBP26.18■■□□□ 1.78
LDB1-202ENST00000425280 NCF1CA8MVU1 366 aaPredicted RBP26.18■■□□□ 1.78
LDB1-202ENST00000425280 PRNPP04156 253 aa26.18■■□□□ 1.78
LDB1-202ENST00000425280 NCF1P14598 390 aaPredicted RBP26.18■■□□□ 1.78
LDB1-202ENST00000425280 MMP12P39900 470 aa26.18■■□□□ 1.78
LDB1-202ENST00000425280 ETV3P41162 512 aa26.18■■□□□ 1.78
LDB1-202ENST00000425280 METAP1P53582 386 aa26.18■■□□□ 1.78
LDB1-202ENST00000425280 DCDC1P59894 354 aa26.18■■□□□ 1.78
LDB1-202ENST00000425280 LONP2Q86WA8 852 aa26.18■■□□□ 1.78
LDB1-202ENST00000425280 AFAP1L2Q8N4X5 818 aa26.18■■□□□ 1.78
LDB1-202ENST00000425280 ZBTB2Q8N680 514 aa26.18■■□□□ 1.78
LDB1-202ENST00000425280 SCAMP4Q969E2 229 aa26.18■■□□□ 1.78
LDB1-202ENST00000425280 S1PR5Q9H228 398 aa26.18■■□□□ 1.78
LDB1-202ENST00000425280 TAS2R1Q9NYW7 299 aa26.18■■□□□ 1.78
LDB1-202ENST00000425280 TRAF6Q9Y4K3 522 aa26.18■■□□□ 1.78
LDB1-202ENST00000425280 PIKFYVEQ9Y2I7 2098 aa26.17■■□□□ 1.78
LDB1-202ENST00000425280 STX16-NPEPL1H3BU86 382 aa26.17■■□□□ 1.78
LDB1-202ENST00000425280 SDHDO14521 159 aa26.17■■□□□ 1.78
LDB1-202ENST00000425280 STX16O14662 325 aa26.17■■□□□ 1.78
LDB1-202ENST00000425280 BTKQ06187 659 aa26.17■■□□□ 1.78
LDB1-202ENST00000425280 MAELQ96JY0 434 aaKnown RBP26.17■■□□□ 1.78
LDB1-202ENST00000425280 ASB2Q96Q27 587 aa26.17■■□□□ 1.78
LDB1-202ENST00000425280 TMEM245Q9H330 911 aa26.17■■□□□ 1.78
LDB1-202ENST00000425280 KLC4Q9NSK0 619 aa26.17■■□□□ 1.78
LDB1-202ENST00000425280 SPATS2LQ9NUQ6 558 aaKnown RBP26.17■■□□□ 1.78
LDB1-202ENST00000425280 PLXNA2O75051 1894 aa26.17■■□□□ 1.78
LDB1-202ENST00000425280 TBC1D3BA6NDS4 549 aa26.16■■□□□ 1.78
LDB1-202ENST00000425280 PPP6CO00743 305 aa26.16■■□□□ 1.78
LDB1-202ENST00000425280 DCXO43602 365 aa26.16■■□□□ 1.78
LDB1-202ENST00000425280 MGRN1O60291 552 aa26.16■■□□□ 1.78
LDB1-202ENST00000425280 PSMC3P17980 439 aa26.16■■□□□ 1.78
LDB1-202ENST00000425280 SH3BP2P78314 561 aa26.16■■□□□ 1.78
LDB1-202ENST00000425280 FBXO48Q5FWF7 155 aa26.16■■□□□ 1.78
LDB1-202ENST00000425280 TMIEQ8NEW7 156 aa26.16■■□□□ 1.78
LDB1-202ENST00000425280 OR8D1Q8WZ84 308 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms