RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 BIRC7Q96CA5 298 aa14.23□□□□□ -0.13
MSH5-206ENST00000423982 CHID1Q9BWS9 393 aa14.23□□□□□ -0.13
MSH5-206ENST00000423982 CD320Q9NPF0 282 aa14.23□□□□□ -0.13
MSH5-206ENST00000423982 ENTPD7Q9NQZ7 604 aa14.23□□□□□ -0.13
MSH5-206ENST00000423982 ANAPC2Q9UJX6 822 aa14.23□□□□□ -0.13
MSH5-206ENST00000423982 BBIP1A8MTZ0 92 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 HHLA1C9JL84 531 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 TOR1BO14657 336 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 PSMD3O43242 534 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 MAN1A2O60476 641 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 CDH3P22223 829 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 HRH2P25021 359 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 ATP4BP51164 291 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 CLCN5P51795 746 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 GEMP55040 296 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 OXCT1P55809 520 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 DEFB103AP81534 67 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 TUSC3Q13454 348 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 AQP6Q13520 282 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 SPCS2Q15005 226 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 PERM1Q5SV97 790 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 ZNF549Q6P9A3 640 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 BLOC1S3Q6QNY0 202 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 ZNF354CQ86Y25 554 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 ESAMQ96AP7 390 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 L3HYPDHQ96EM0 354 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 ABHD8Q96I13 439 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 DGCR6LQ9BY27 220 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 CNGB3Q9NQW8 809 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 SDR39U1Q9NRG7 319 aaPredicted RBP14.22□□□□□ -0.13
MSH5-206ENST00000423982 TMEM161AQ9NX61 479 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 MATN3O15232 486 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 NOL3O60936 208 aaKnown RBP14.22□□□□□ -0.13
MSH5-206ENST00000423982 S1PR4O95977 384 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 LDLRP01130 860 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 MTHFD2P13995 350 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 DNAJB2P25686 324 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 OPRL1P41146 370 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 TIAL1Q01085 375 aaKnown RBP eCLIP14.22□□□□□ -0.132e-9■■■■□ 19.7
MSH5-206ENST00000423982 GALNT1Q10472 559 aaPredicted RBP14.22□□□□□ -0.13
MSH5-206ENST00000423982 AAK1Q2M2I8 961 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 TIGD2Q4W5G0 525 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 C7orf61Q8IZ16 206 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 HS3ST5Q8IZT8 346 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 SCAMP5Q8TAC9 235 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 PGAP3Q96FM1 320 aaPredicted RBP14.22□□□□□ -0.13
MSH5-206ENST00000423982 NTN4Q9HB63 628 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 ERGIC3Q9Y282 383 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 UNC80Q8N2C7 3258 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 CHD9Q3L8U1 2897 aa14.22□□□□□ -0.13
MSH5-206ENST00000423982 SOBPA7XYQ1 873 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 ZBBXA8MT70 800 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 CPNE6O95741 557 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 EOMESO95936 686 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 GPIP06744 558 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 MBL2P11226 248 aaPredicted RBP14.21□□□□□ -0.13
MSH5-206ENST00000423982 CD1DP15813 335 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 PNPLA4P41247 253 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 CD86P42081 329 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 ZFP36L2P47974 494 aaKnown RBP14.21□□□□□ -0.13
MSH5-206ENST00000423982 RGS21Q2M5E4 152 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 ZNF773Q6PK81 442 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 DCP1BQ8IZD4 617 aaKnown RBP14.21□□□□□ -0.13
MSH5-206ENST00000423982 TOP6BLQ8N6T0 577 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 PDZD8Q8NEN9 1154 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 NT5MQ9NPB1 228 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 PCDH12Q9NPG4 1184 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 EXD2Q9NVH0 621 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 RIC8BQ9NVN3 520 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 GID8Q9NWU2 228 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 IKZF3Q9UKT9 509 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 NCF1BA6NI72 391 aaPredicted RBP14.21□□□□□ -0.13
MSH5-206ENST00000423982 NCF1CA8MVU1 366 aaPredicted RBP14.21□□□□□ -0.13
MSH5-206ENST00000423982 GABRDO14764 452 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 PAGE1O75459 146 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 CNTN5O94779 1100 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 WISP3O95389 354 aaPredicted RBP14.21□□□□□ -0.13
MSH5-206ENST00000423982 C1RP00736 705 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 ALBP02768 609 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 PIRTP0C851 137 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 NCF1P14598 390 aaPredicted RBP14.21□□□□□ -0.13
MSH5-206ENST00000423982 TTKP33981 857 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 PLA2G16P53816 162 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 R3HCC1LQ7Z5L2 792 aaKnown RBP14.21□□□□□ -0.13
MSH5-206ENST00000423982 C14orf80Q86SX3 495 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 ACOX2Q99424 681 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 YIPF2Q9BWQ6 316 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 ING2Q9H160 280 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 MRGBPQ9NV56 204 aa14.21□□□□□ -0.13
MSH5-206ENST00000423982 TDRD15B5MCY1 1934 aaKnown RBP14.21□□□□□ -0.13
MSH5-206ENST00000423982 SEC14L2O76054 403 aa14.21□□□□□ -0.14
MSH5-206ENST00000423982 TIMP1P01033 207 aa14.21□□□□□ -0.14
MSH5-206ENST00000423982 LBPP18428 481 aa14.21□□□□□ -0.14
MSH5-206ENST00000423982 EIF2B2P49770 351 aaKnown RBP14.21□□□□□ -0.14
MSH5-206ENST00000423982 FAM189BP81408 668 aa14.21□□□□□ -0.14
MSH5-206ENST00000423982 DSC2Q02487 901 aa14.21□□□□□ -0.14
MSH5-206ENST00000423982 GRSF1Q12849 480 aaKnown RBP eCLIP14.21□□□□□ -0.14
MSH5-206ENST00000423982 SELPLGQ14242 412 aa14.21□□□□□ -0.14
MSH5-206ENST00000423982 SEMA3AQ14563 771 aa14.21□□□□□ -0.14
MSH5-206ENST00000423982 RAB41Q5JT25 222 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms