RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 EEF1DP29692 281 aaKnown RBP9.66□□□□□ -0.86
CMSS1-201ENST00000421999 GRIA2P42262 883 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 SSR2P43308 183 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 CYLC2Q14093 348 aaPredicted RBP9.66□□□□□ -0.86
CMSS1-201ENST00000421999 TAF1AQ15573 450 aaPredicted RBP9.66□□□□□ -0.86
CMSS1-201ENST00000421999 RAD51AP1Q96B01 352 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 NCDNQ9UBB6 729 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 BTRCQ9Y297 605 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 TCRBV21S2A2A0A5A6 115 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 CCDC162PA2VCL2 907 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 NPEPPSL1A6NEC2 478 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 NEMP2A6NFY4 417 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 ABLIM3O94929 683 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 MLYCDO95822 493 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 OTCP00480 354 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 COX7A2P14406 83 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 CREB1P16220 341 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 GRIA4P48058 902 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 PON2Q15165 354 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 MTDHQ86UE4 582 aaKnown RBP9.65□□□□□ -0.86
CMSS1-201ENST00000421999 SCML4Q8N228 414 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 ZNF75CPQ92670 426 aaPredicted RBP9.65□□□□□ -0.86
CMSS1-201ENST00000421999 FANCEQ9HB96 536 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 ANLNQ9NQW6 1124 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 SPATS2LQ9NUQ6 558 aaKnown RBP9.65□□□□□ -0.86
CMSS1-201ENST00000421999 B4GALT6Q9UBX8 382 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 ACTL7AQ9Y615 435 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 APC2O95996 2303 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 SPTBN2O15020 2390 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 LEFTY1O75610 366 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 SLC6A4P31645 630 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 ESRRGP62508 458 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 ZNF33AQ06730 810 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 MRPL58Q14197 206 aaKnown RBP9.65□□□□□ -0.86
CMSS1-201ENST00000421999 RASA2Q15283 850 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 MINDY4Q4G0A6 757 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 GPRIN3Q6ZVF9 776 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 GAREM2Q75VX8 874 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 HORMAD1Q86X24 394 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 PRSS58Q8IYP2 241 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 ACMSDQ8TDX5 336 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 STX18Q9P2W9 335 aaKnown RBP9.65□□□□□ -0.86
CMSS1-201ENST00000421999 SLC7A4O43246 635 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 DCXO43602 365 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 HNRNPCL1O60812 293 aaKnown RBP9.65□□□□□ -0.86
CMSS1-201ENST00000421999 STK16O75716 305 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 ZNF682O95780 498 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 CEBPBP17676 345 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 PBX2P40425 430 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 PXNP49023 591 aaPredicted RBP9.65□□□□□ -0.86
CMSS1-201ENST00000421999 RPL6Q02878 288 aaKnown RBP9.65□□□□□ -0.86
CMSS1-201ENST00000421999 PAGE2Q7Z2X7 111 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 APCDD1Q8J025 514 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 KCNV2Q8TDN2 545 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 FAM3CQ92520 227 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 INPP5DQ92835 1189 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 NR1H4Q96RI1 486 aaPredicted RBP9.65□□□□□ -0.86
CMSS1-201ENST00000421999 GPR174Q9BXC1 333 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 TRIT1Q9H3H1 467 aaKnown RBP9.65□□□□□ -0.86
CMSS1-201ENST00000421999 INTS7Q9NVH2 962 aaKnown RBP9.65□□□□□ -0.86
CMSS1-201ENST00000421999 SLC17A7Q9P2U7 560 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 SLC2A6Q9UGQ3 507 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 KCTD3Q9Y597 815 aa9.65□□□□□ -0.86
CMSS1-201ENST00000421999 FAM47E-STBD1D6RA91 191 aa9.65□□□□□ -0.87
CMSS1-201ENST00000421999 NTSP30990 170 aa9.65□□□□□ -0.87
CMSS1-201ENST00000421999 PTGER3P43115 390 aa9.65□□□□□ -0.87
CMSS1-201ENST00000421999 RPL14P50914 215 aaKnown RBP9.65□□□□□ -0.87
CMSS1-201ENST00000421999 PWP1Q13610 501 aa9.65□□□□□ -0.87
CMSS1-201ENST00000421999 PTPRCAPQ14761 206 aa9.65□□□□□ -0.87
CMSS1-201ENST00000421999 EIF4HQ15056 248 aaKnown RBP9.65□□□□□ -0.87
CMSS1-201ENST00000421999 CHRNA6Q15825 494 aa9.65□□□□□ -0.87
CMSS1-201ENST00000421999 LPAL2Q16609 132 aa9.65□□□□□ -0.87
CMSS1-201ENST00000421999 LDLRAP1Q5SW96 308 aa9.65□□□□□ -0.87
CMSS1-201ENST00000421999 KIAA0408Q6ZU52 694 aa9.65□□□□□ -0.87
CMSS1-201ENST00000421999 PATL1Q86TB9 770 aaKnown RBP9.65□□□□□ -0.87
CMSS1-201ENST00000421999 LONP2Q86WA8 852 aa9.65□□□□□ -0.87
CMSS1-201ENST00000421999 IGDCC3Q8IVU1 814 aa9.65□□□□□ -0.87
CMSS1-201ENST00000421999 CLDN19Q8N6F1 224 aa9.65□□□□□ -0.87
CMSS1-201ENST00000421999 SHKBP1Q8TBC3 707 aa9.65□□□□□ -0.87
CMSS1-201ENST00000421999 CDKN2AIPNLQ96HQ2 116 aa9.65□□□□□ -0.87
CMSS1-201ENST00000421999 ZNF514Q96K75 400 aaPredicted RBP9.65□□□□□ -0.87
CMSS1-201ENST00000421999 PSKH2Q96QS6 385 aa9.65□□□□□ -0.87
CMSS1-201ENST00000421999 FAIM2Q9BWQ8 316 aa9.65□□□□□ -0.87
CMSS1-201ENST00000421999 KLF16Q9BXK1 252 aaPredicted RBP9.65□□□□□ -0.87
CMSS1-201ENST00000421999 KLC4Q9NSK0 619 aa9.65□□□□□ -0.87
CMSS1-201ENST00000421999 KLHL28Q9NXS3 571 aa9.65□□□□□ -0.87
CMSS1-201ENST00000421999 DNMT3BQ9UBC3 853 aaKnown RBP9.65□□□□□ -0.87
CMSS1-201ENST00000421999 VTI1BQ9UEU0 232 aa9.65□□□□□ -0.87
CMSS1-201ENST00000421999 MRPS33Q9Y291 106 aaKnown RBP9.65□□□□□ -0.87
CMSS1-201ENST00000421999 OTOFQ9HC10 1997 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 ESR1P03372 595 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 CENPAP49450 140 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 RPL38P63173 70 aaKnown RBP9.64□□□□□ -0.87
CMSS1-201ENST00000421999 ALDH6A1Q02252 535 aaKnown RBP9.64□□□□□ -0.87
CMSS1-201ENST00000421999 PLOD1Q02809 727 aaPredicted RBP9.64□□□□□ -0.87
CMSS1-201ENST00000421999 FLOT2Q14254 428 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 FASTKQ14296 549 aaKnown RBP9.64□□□□□ -0.87
CMSS1-201ENST00000421999 C1orf53Q5VUE5 145 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 LRRC66Q68CR7 880 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 FSTL4Q6MZW2 842 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms