RNA–Protein interactions for RNA: ENST00000412036.6

CXXC1-202, Transcript of CXXC finger protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXXC1, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-202ENST00000412036 SPATA21Q7Z572 469 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 LSMEM2Q8N112 164 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 RPLP0P6Q8NHW5 317 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 LINGO1Q96FE5 620 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 COPS8Q99627 209 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 SHCBP1LQ9BZQ2 653 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 CCDC68Q9H2F9 335 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 POPDC3Q9HBV1 291 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 DCTN4Q9UJW0 460 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 WDFY4Q6ZS81 3184 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 IGLON5A6NGN9 336 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 C1QTNF3-AMACRE9PGA6 284 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 UBXN8O00124 270 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 HGSO14964 777 aaPredicted RBP17.82■□□□□ 0.44
CXXC1-202ENST00000412036 HOXB2P14652 356 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 CCR7P32248 378 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 NAGLUP54802 743 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 STX3Q13277 289 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 ACAP2Q15057 778 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 LEXMQ3ZCV2 418 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 TMEM52BQ4KMG9 183 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 AGAP9Q5VTM2 703 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 PTRHD1Q6GMV3 140 aaKnown RBP17.82■□□□□ 0.44
CXXC1-202ENST00000412036 C6orf89Q6UWU4 347 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 MAVSQ7Z434 540 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 VRK3Q8IV63 474 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 C10orf67Q8IYJ2 551 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 HDDC3Q8N4P3 179 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 TRAM1L1Q8N609 369 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 C10orf82Q8WW14 230 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 DLG3Q92796 817 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 PHF21BQ96EK2 531 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 PNPOQ9NVS9 261 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 SMOXQ9NWM0 555 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 ZFR2Q9UPR6 939 aaKnown RBP17.82■□□□□ 0.44
CXXC1-202ENST00000412036 DHRS7Q9Y394 339 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 ASB1Q9Y576 335 aa17.82■□□□□ 0.44
CXXC1-202ENST00000412036 SLC1A6P48664 564 aa17.81■□□□□ 0.44
CXXC1-202ENST00000412036 SLC44A4Q53GD3 710 aa17.81■□□□□ 0.44
CXXC1-202ENST00000412036 GKAP1Q5VSY0 366 aaPredicted RBP17.81■□□□□ 0.44
CXXC1-202ENST00000412036 TMPRSS6Q8IU80 811 aa17.81■□□□□ 0.44
CXXC1-202ENST00000412036 LILRA3Q8N6C8 439 aaPredicted RBP17.81■□□□□ 0.44
CXXC1-202ENST00000412036 OR2T3Q8NH03 318 aa17.81■□□□□ 0.44
CXXC1-202ENST00000412036 DNASE1L2Q92874 299 aa17.81■□□□□ 0.44
CXXC1-202ENST00000412036 KLK6Q92876 244 aa17.81■□□□□ 0.44
CXXC1-202ENST00000412036 PPP1R16AQ96I34 528 aa17.81■□□□□ 0.44
CXXC1-202ENST00000412036 NFKBIL1Q9UBC1 381 aaPredicted RBP17.81■□□□□ 0.44
CXXC1-202ENST00000412036 KRT87PA6NCN2 255 aa17.81■□□□□ 0.44
CXXC1-202ENST00000412036 OR2AG2A6NM03 316 aa17.81■□□□□ 0.44
CXXC1-202ENST00000412036 H0Y858 1186 aa17.81■□□□□ 0.44
CXXC1-202ENST00000412036 NEMP1O14524 444 aa17.81■□□□□ 0.44
CXXC1-202ENST00000412036 SYNCRIPO60506 623 aaKnown RBP17.81■□□□□ 0.44
CXXC1-202ENST00000412036 VPS26AO75436 327 aa17.81■□□□□ 0.44
CXXC1-202ENST00000412036 SERPINE1P05121 402 aa17.81■□□□□ 0.44
CXXC1-202ENST00000412036 CREB5Q02930 508 aa17.81■□□□□ 0.44
CXXC1-202ENST00000412036 TSNAXIP1Q2TAA8 658 aa17.81■□□□□ 0.44
CXXC1-202ENST00000412036 PREPLQ4J6C6 727 aaPredicted RBP17.81■□□□□ 0.44
CXXC1-202ENST00000412036 SUGP1Q8IWZ8 645 aaKnown RBP17.81■□□□□ 0.44
CXXC1-202ENST00000412036 ZNF687Q8N1G0 1237 aa17.81■□□□□ 0.44
CXXC1-202ENST00000412036 PLCD3Q8N3E9 789 aa17.81■□□□□ 0.44
CXXC1-202ENST00000412036 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.81■□□□□ 0.44
CXXC1-202ENST00000412036 OSBPL6Q9BZF3 934 aa17.81■□□□□ 0.44
CXXC1-202ENST00000412036 DERL2Q9GZP9 239 aa17.81■□□□□ 0.44
CXXC1-202ENST00000412036 TRMT6Q9UJA5 497 aaKnown RBP17.81■□□□□ 0.44
CXXC1-202ENST00000412036 ADAMTS6Q9UKP5 1117 aa17.81■□□□□ 0.44
CXXC1-202ENST00000412036 NDRG2Q9UN36 371 aaKnown RBP17.81■□□□□ 0.44
CXXC1-202ENST00000412036 VPS9D1Q9Y2B5 631 aa17.81■□□□□ 0.44
CXXC1-202ENST00000412036 SPEGQ15772 3267 aa17.8■□□□□ 0.44
CXXC1-202ENST00000412036 E5RI56 91 aa17.8■□□□□ 0.44
CXXC1-202ENST00000412036 PPP6CO00743 305 aa17.8■□□□□ 0.44
CXXC1-202ENST00000412036 TRIM13O60858 407 aa17.8■□□□□ 0.44
CXXC1-202ENST00000412036 RNASEH2AO75792 299 aaKnown RBP17.8■□□□□ 0.44
CXXC1-202ENST00000412036 SIX3O95343 332 aaPredicted RBP17.8■□□□□ 0.44
CXXC1-202ENST00000412036 CD9P21926 228 aa17.8■□□□□ 0.44
CXXC1-202ENST00000412036 SLC26A3P40879 764 aa17.8■□□□□ 0.44
CXXC1-202ENST00000412036 GRSF1Q12849 480 aaKnown RBP eCLIP17.8■□□□□ 0.44
CXXC1-202ENST00000412036 XKR5Q6UX68 686 aa17.8■□□□□ 0.44
CXXC1-202ENST00000412036 DSG4Q86SJ6 1040 aa17.8■□□□□ 0.44
CXXC1-202ENST00000412036 LCA5Q86VQ0 697 aa17.8■□□□□ 0.44
CXXC1-202ENST00000412036 RASGEF1AQ8N9B8 481 aa17.8■□□□□ 0.44
CXXC1-202ENST00000412036 AGR3Q8TD06 166 aa17.8■□□□□ 0.44
CXXC1-202ENST00000412036 BTN2A2Q8WVV5 523 aa17.8■□□□□ 0.44
CXXC1-202ENST00000412036 DYRK4Q9NR20 520 aa17.8■□□□□ 0.44
CXXC1-202ENST00000412036 GULP1Q9UBP9 304 aa17.8■□□□□ 0.44
CXXC1-202ENST00000412036 PCDHB1Q9Y5F3 818 aa17.8■□□□□ 0.44
CXXC1-202ENST00000412036 PRR23AA6NEV1 266 aa17.79■□□□□ 0.44
CXXC1-202ENST00000412036 LOC730098B7Z3J9 87 aa17.79■□□□□ 0.44
CXXC1-202ENST00000412036 TSPAN8P19075 237 aa17.79■□□□□ 0.44
CXXC1-202ENST00000412036 DRD1P21728 446 aa17.79■□□□□ 0.44
CXXC1-202ENST00000412036 NSG1P42857 185 aa17.79■□□□□ 0.44
CXXC1-202ENST00000412036 ELP6Q0PNE2 266 aa17.79■□□□□ 0.44
CXXC1-202ENST00000412036 C18orf21Q32NC0 220 aaPredicted RBP17.79■□□□□ 0.44
CXXC1-202ENST00000412036 PRPF38BQ5VTL8 546 aaKnown RBP17.79■□□□□ 0.44
CXXC1-202ENST00000412036 LIPMQ5VYY2 423 aa17.79■□□□□ 0.44
CXXC1-202ENST00000412036 NUDT18Q6ZVK8 323 aa17.79■□□□□ 0.44
CXXC1-202ENST00000412036 ZNF781Q8N8C0 355 aa17.79■□□□□ 0.44
CXXC1-202ENST00000412036 DDHD1Q8NEL9 900 aa17.79■□□□□ 0.44
CXXC1-202ENST00000412036 FAM3CQ92520 227 aa17.79■□□□□ 0.44
CXXC1-202ENST00000412036 GLYATL1Q969I3 302 aa17.79■□□□□ 0.44
CXXC1-202ENST00000412036 NUS1Q96E22 293 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms