RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 ZNF106Q9H2Y7 1883 aaKnown RBP19.57■□□□□ 0.72
PDLIM2-207ENST00000409417 CCDC162PA2VCL2 907 aa19.57■□□□□ 0.72
PDLIM2-207ENST00000409417 CPED1A4D0V7 1026 aa19.57■□□□□ 0.72
PDLIM2-207ENST00000409417 B4DGG1 531 aa19.57■□□□□ 0.72
PDLIM2-207ENST00000409417 GOLGA8MH3BSY2 632 aa19.57■□□□□ 0.72
PDLIM2-207ENST00000409417 RALBP11234 206 aa19.57■□□□□ 0.72
PDLIM2-207ENST00000409417 ZNF7P17097 686 aaPredicted RBP19.57■□□□□ 0.72
PDLIM2-207ENST00000409417 IVDP26440 423 aa19.57■□□□□ 0.72
PDLIM2-207ENST00000409417 CLCNKAP51800 687 aa19.57■□□□□ 0.72
PDLIM2-207ENST00000409417 GUSBP11Q6P575 273 aa19.57■□□□□ 0.72
PDLIM2-207ENST00000409417 TAS2R42Q7RTR8 314 aa19.57■□□□□ 0.72
PDLIM2-207ENST00000409417 OR6C4Q8NGE1 309 aa19.57■□□□□ 0.72
PDLIM2-207ENST00000409417 ZDHHC1Q8WTX9 485 aa19.57■□□□□ 0.72
PDLIM2-207ENST00000409417 DCUN1D1Q96GG9 259 aa19.57■□□□□ 0.72
PDLIM2-207ENST00000409417 SGSM3Q96HU1 749 aa19.57■□□□□ 0.72
PDLIM2-207ENST00000409417 SERPINB12Q96P63 405 aa19.57■□□□□ 0.72
PDLIM2-207ENST00000409417 KRT12Q99456 494 aa19.57■□□□□ 0.72
PDLIM2-207ENST00000409417 COPS8Q99627 209 aa19.57■□□□□ 0.72
PDLIM2-207ENST00000409417 TIMM29Q9BSF4 260 aa19.57■□□□□ 0.72
PDLIM2-207ENST00000409417 MRM3Q9HC36 420 aaKnown RBP19.57■□□□□ 0.72
PDLIM2-207ENST00000409417 TREX1Q9NSU2 369 aa19.57■□□□□ 0.72
PDLIM2-207ENST00000409417 KCNK6Q9Y257 313 aa19.57■□□□□ 0.72
PDLIM2-207ENST00000409417 MYLKQ15746 1914 aa19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 IGLV3-16A0A075B6K0 115 aa19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 KIF2AO00139 706 aaPredicted RBP19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 TTI1O43156 1089 aa19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 ACRV1P26436 265 aa19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 MAGEA3P43357 314 aa19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 CDKN1CP49918 316 aaPredicted RBP19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 CTSCP53634 463 aa19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 E2F1Q01094 437 aa19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 FOXC1Q12948 553 aa19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 INSCQ1MX18 579 aa19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 C14orf28Q4W4Y0 310 aa19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 AFTPHQ6ULP2 937 aa19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 DHRS13Q6UX07 377 aa19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 C11orf96Q7Z7L8 435 aa19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 PCGF5Q86SE9 256 aa19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 HOOK3Q86VS8 718 aa19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 SERPINA9Q86WD7 417 aa19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 C17orf82Q86X59 251 aaPredicted RBP19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 SFTPA2Q8IWL1 248 aa19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 PIANPQ8IYJ0 282 aa19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 CHCHD4Q8N4Q1 142 aa19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 IFI44Q8TCB0 444 aa19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 KLC4Q9NSK0 619 aa19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 SYBUQ9NX95 663 aa19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 ZDHHC3Q9NYG2 299 aa19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 SLC23A2Q9UGH3 650 aa19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 WASF3Q9UPY6 502 aa19.56■□□□□ 0.72
PDLIM2-207ENST00000409417 SDR42E2A6NKP2 422 aa19.55■□□□□ 0.72
PDLIM2-207ENST00000409417 OR2AG2A6NM03 316 aa19.55■□□□□ 0.72
PDLIM2-207ENST00000409417 CFAP99D6REC4 459 aa19.55■□□□□ 0.72
PDLIM2-207ENST00000409417 DNALI1O14645 258 aaPredicted RBP19.55■□□□□ 0.72
PDLIM2-207ENST00000409417 FOXN2P32314 431 aa19.55■□□□□ 0.72
PDLIM2-207ENST00000409417 PRAMEP78395 509 aa19.55■□□□□ 0.72
PDLIM2-207ENST00000409417 B4GALNT1Q00973 533 aa19.55■□□□□ 0.72
PDLIM2-207ENST00000409417 HLTFQ14527 1009 aaKnown RBP eCLIP19.55■□□□□ 0.72
PDLIM2-207ENST00000409417 TMEM220Q6QAJ8 160 aa19.55■□□□□ 0.72
PDLIM2-207ENST00000409417 MICALCLQ6ZW33 695 aa19.55■□□□□ 0.72
PDLIM2-207ENST00000409417 EFL1Q7Z2Z2 1120 aaKnown RBP19.55■□□□□ 0.72
PDLIM2-207ENST00000409417 ZNF572Q7Z3I7 529 aaPredicted RBP19.55■□□□□ 0.72
PDLIM2-207ENST00000409417 OR6P1Q8NGX9 317 aa19.55■□□□□ 0.72
PDLIM2-207ENST00000409417 OR4L1Q8NH43 312 aa19.55■□□□□ 0.72
PDLIM2-207ENST00000409417 SGF29Q96ES7 293 aa19.55■□□□□ 0.72
PDLIM2-207ENST00000409417 TBC1D29Q9UFV1 150 aa19.55■□□□□ 0.72
PDLIM2-207ENST00000409417 CDC23Q9UJX2 597 aa19.55■□□□□ 0.72
PDLIM2-207ENST00000409417 SOX13Q9UN79 622 aa19.55■□□□□ 0.72
PDLIM2-207ENST00000409417 DNMT3AQ9Y6K1 912 aaPredicted RBP19.55■□□□□ 0.72
PDLIM2-207ENST00000409417 MAGEB16A2A368 324 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 OR51F1A6NGY5 319 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 PRR19A6NJB7 356 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 KCNJ13O60928 360 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 GOT2P00505 430 aaKnown RBP19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 PRSS56P0CW18 603 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 GLB1P16278 677 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 VCLP18206 1134 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 SMAD1Q15797 465 aaKnown RBP19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 PLA2G4EQ3MJ16 856 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 FNBP1LQ5T0N5 605 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 IZUMO3Q5VZ72 239 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 AMZ2Q86W34 360 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 NAGSQ8N159 534 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 TRIM51Q9BSJ1 452 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 SAMD15Q9P1V8 674 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 A6NCN8 305 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 NUDT21O43809 227 aaKnown RBP19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 HYAL3O43820 417 aaPredicted RBP19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 POP7O75817 140 aaKnown RBP19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 URI1O94763 535 aaPredicted RBP19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 ATP1B2P14415 290 aaPredicted RBP19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 NMBRP28336 390 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 SHC2P98077 582 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 DBN1Q16643 649 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 BCL7AQ4VC05 210 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 PERM1Q5SV97 790 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 CASC4Q6P4E1 433 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 DET1Q7L5Y6 550 aa19.54■□□□□ 0.72
PDLIM2-207ENST00000409417 MAATS1Q7Z4T9 603 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms