RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 AGTP01019 485 aa19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 ZNF7P17097 686 aaPredicted RBP19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 CTNNA2P26232 953 aa19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 TNNT3P45378 269 aaPredicted RBP19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 RHDQ02161 417 aa19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 KIR2DS5Q14953 304 aa19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 SEPT7Q16181 437 aaKnown RBP19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 SNAP47Q5SQN1 464 aa19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 GLT6D1Q7Z4J2 308 aa19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 LRRTM4Q86VH4 590 aa19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 LRRC57Q8N9N7 239 aa19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 LSM14AQ8ND56 463 aaKnown RBP19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 AGBL5Q8NDL9 886 aa19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 DPYSL5Q9BPU6 564 aa19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 TBC1D10AQ9BXI6 508 aa19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 GBA3Q9H227 469 aa19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 STN1Q9H668 368 aaKnown RBP19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 OCIAD1Q9NX40 245 aa19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 PDP2Q9P2J9 529 aa19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 A8MU76 341 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 KMOO15229 486 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 UGT1A9O60656 530 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 PYGMP11217 842 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 SLC2A4P14672 509 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 UGT1A6P19224 532 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 HLA-DPA1P20036 260 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 UGT1A1P22309 533 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 UGT1A4P22310 534 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 CSTF2P33240 577 aaKnown RBP eCLIP19■□□□□ 0.63
SMARCB1-204ENST00000407422 UGT1A3P35503 534 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 MAPK9P45984 424 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 VAV2P52735 878 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 UBE2IP63279 158 aaKnown RBP19■□□□□ 0.63
SMARCB1-204ENST00000407422 OLIG2Q13516 323 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 PTPRCAPQ14761 206 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 CHRNA6Q15825 494 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 TAF1BQ53T94 588 aaPredicted RBP19■□□□□ 0.63
SMARCB1-204ENST00000407422 TMEM164Q5U3C3 297 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 FAM151BQ6UXP7 276 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 VASH2Q86V25 355 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 DTX1Q86Y01 620 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 GDAP1Q8TB36 358 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 NCSTNQ92542 709 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 TTC9Q92623 222 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 ART4Q93070 314 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 SH3KBP1Q96B97 665 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 CALR3Q96L12 384 aaKnown RBP19■□□□□ 0.63
SMARCB1-204ENST00000407422 FSD1LQ9BXM9 530 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 UGT1A7Q9HAW7 530 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 UGT1A10Q9HAW8 530 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 UGT1A8Q9HAW9 530 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 HACD3Q9P035 362 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 EFR3BQ9Y2G0 817 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 A0A0U1RQJ8 604 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 CCDC66A2RUB6 948 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 PRR19A6NJB7 356 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 OR5K4A6NMS3 321 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 PTPN7P35236 360 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 SPAM1P38567 509 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 RWDD2BP57060 319 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 EIF3EP60228 445 aaKnown RBP19■□□□□ 0.63
SMARCB1-204ENST00000407422 TMEM115Q12893 351 aaPredicted RBP19■□□□□ 0.63
SMARCB1-204ENST00000407422 WDR74Q6RFH5 385 aaPredicted RBP19■□□□□ 0.63
SMARCB1-204ENST00000407422 C11orf96Q7Z7L8 435 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 TMEM139Q8IV31 216 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 JPH3Q8WXH2 748 aaPredicted RBP19■□□□□ 0.63
SMARCB1-204ENST00000407422 TAAR9Q96RI9 348 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 BAG1Q99933 345 aaPredicted RBP19■□□□□ 0.63
SMARCB1-204ENST00000407422 FICDQ9BVA6 458 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 ZNF624Q9P2J8 865 aaPredicted RBP19■□□□□ 0.63
SMARCB1-204ENST00000407422 TRIM10Q9UDY6 481 aa19■□□□□ 0.63
SMARCB1-204ENST00000407422 ZNF462Q96JM2 2506 aa18.99■□□□□ 0.63
SMARCB1-204ENST00000407422 COL6A6A6NMZ7 2263 aa18.99■□□□□ 0.63
SMARCB1-204ENST00000407422 ZNF106Q9H2Y7 1883 aaKnown RBP18.99■□□□□ 0.63
SMARCB1-204ENST00000407422 GAPDHSO14556 408 aaPredicted RBP18.99■□□□□ 0.63
SMARCB1-204ENST00000407422 RBP3P10745 1247 aa18.99■□□□□ 0.63
SMARCB1-204ENST00000407422 BRAFP15056 766 aa18.99■□□□□ 0.63
SMARCB1-204ENST00000407422 RPL10P27635 214 aaKnown RBP18.99■□□□□ 0.63
SMARCB1-204ENST00000407422 FAM129CQ86XR2 697 aa18.99■□□□□ 0.63
SMARCB1-204ENST00000407422 TRAPPC5Q8IUR0 188 aa18.99■□□□□ 0.63
SMARCB1-204ENST00000407422 APOL2Q9BQE5 337 aa18.99■□□□□ 0.63
SMARCB1-204ENST00000407422 TIMM29Q9BSF4 260 aa18.99■□□□□ 0.63
SMARCB1-204ENST00000407422 B3GNT4Q9C0J1 378 aa18.99■□□□□ 0.63
SMARCB1-204ENST00000407422 B3GALT1Q9Y5Z6 326 aa18.99■□□□□ 0.63
SMARCB1-204ENST00000407422 GLYATL1P3A0A0U1RQE8 302 aa18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 EFCAB7A8K855 629 aa18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 PDZK1P1A8MUH7 402 aa18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 KCNN4O15554 427 aa18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 XRCC1P18887 633 aaPredicted RBP18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 PSMB4P28070 264 aa18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 SLC19A1P41440 591 aa18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 EPHA4P54764 986 aa18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 DRG2P55039 364 aaKnown RBP18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 GEMP55040 296 aa18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 ANKRD20A2Q5SQ80 823 aa18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 ANKRD20A1Q5TYW2 823 aa18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 ANKRD20A3Q5VUR7 823 aa18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 ITPRIPL1Q6GPH6 555 aa18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 DARS2Q6PI48 645 aaKnown RBP18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 ARHGAP22Q7Z5H3 698 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms