RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 ZNF7P17097 686 aaPredicted RBP15.63■□□□□ 0.09
ATG4B-203ENST00000400772 TNNT3P45378 269 aaPredicted RBP15.63■□□□□ 0.09
ATG4B-203ENST00000400772 UBE2IP63279 158 aaKnown RBP15.63■□□□□ 0.09
ATG4B-203ENST00000400772 CXADRP78310 365 aa15.63■□□□□ 0.09
ATG4B-203ENST00000400772 GPLD1P80108 840 aa15.63■□□□□ 0.09
ATG4B-203ENST00000400772 NFATC2Q13469 925 aa15.63■□□□□ 0.09
ATG4B-203ENST00000400772 ZDHHC20Q5W0Z9 365 aa15.63■□□□□ 0.09
ATG4B-203ENST00000400772 DENND5AQ6IQ26 1287 aa15.63■□□□□ 0.09
ATG4B-203ENST00000400772 TMEM71Q6P5X7 295 aa15.63■□□□□ 0.09
ATG4B-203ENST00000400772 FAM151BQ6UXP7 276 aa15.63■□□□□ 0.09
ATG4B-203ENST00000400772 SLC9B2Q86UD5 537 aa15.63■□□□□ 0.09
ATG4B-203ENST00000400772 LRRTM4Q86VH4 590 aa15.63■□□□□ 0.09
ATG4B-203ENST00000400772 KLHDC8BQ8IXV7 354 aa15.63■□□□□ 0.09
ATG4B-203ENST00000400772 TXLNBQ8N3L3 684 aa15.63■□□□□ 0.09
ATG4B-203ENST00000400772 RNF10Q8N5U6 811 aaKnown RBP15.63■□□□□ 0.09
ATG4B-203ENST00000400772 USP7Q93009 1102 aa15.63■□□□□ 0.09
ATG4B-203ENST00000400772 CCDC97Q96F63 343 aaPredicted RBP15.63■□□□□ 0.09
ATG4B-203ENST00000400772 FERMT1Q9BQL6 677 aa15.63■□□□□ 0.09
ATG4B-203ENST00000400772 CPNE5Q9HCH3 593 aa15.63■□□□□ 0.09
ATG4B-203ENST00000400772 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.63■□□□□ 0.09
ATG4B-203ENST00000400772 PDP2Q9P2J9 529 aa15.63■□□□□ 0.09
ATG4B-203ENST00000400772 ACSL6Q9UKU0 697 aa15.63■□□□□ 0.09
ATG4B-203ENST00000400772 AAR2Q9Y312 384 aaKnown RBP15.63■□□□□ 0.09
ATG4B-203ENST00000400772 KCTD3Q9Y597 815 aa15.63■□□□□ 0.09
ATG4B-203ENST00000400772 KIR2DS5A0A0G2JLQ3 304 aa15.62■□□□□ 0.09
ATG4B-203ENST00000400772 PRAMEF33A0A0G2JMD5 474 aa15.62■□□□□ 0.09
ATG4B-203ENST00000400772 A0A0G2JNG1 304 aa15.62■□□□□ 0.09
ATG4B-203ENST00000400772 GLYATL1P3A0A0U1RQE8 302 aa15.62■□□□□ 0.09
ATG4B-203ENST00000400772 C5orf60A6NFR6 353 aa15.62■□□□□ 0.09
ATG4B-203ENST00000400772 OR5K4A6NMS3 321 aa15.62■□□□□ 0.09
ATG4B-203ENST00000400772 C9orf172C9J069 976 aa15.62■□□□□ 0.09
ATG4B-203ENST00000400772 KIR2DS3K7RE56 304 aa15.62■□□□□ 0.09
ATG4B-203ENST00000400772 HGSO14964 777 aaPredicted RBP15.62■□□□□ 0.09
ATG4B-203ENST00000400772 NVLO15381 856 aaKnown RBP15.62■□□□□ 0.09
ATG4B-203ENST00000400772 PRAMEF10O60809 474 aa15.62■□□□□ 0.09
ATG4B-203ENST00000400772 BRAFP15056 766 aa15.62■□□□□ 0.09
ATG4B-203ENST00000400772 XRCC1P18887 633 aaPredicted RBP15.62■□□□□ 0.09
ATG4B-203ENST00000400772 TRA2AQ13595 282 aaKnown RBP eCLIP15.62■□□□□ 0.09
ATG4B-203ENST00000400772 SPARCL1Q14515 664 aa15.62■□□□□ 0.09
ATG4B-203ENST00000400772 KIR2DS5Q14953 304 aa15.62■□□□□ 0.09
ATG4B-203ENST00000400772 TAF1AQ15573 450 aaPredicted RBP15.62■□□□□ 0.09
ATG4B-203ENST00000400772 INSCQ1MX18 579 aa15.62■□□□□ 0.09
ATG4B-203ENST00000400772 BROXQ5VW32 411 aa15.62■□□□□ 0.09
ATG4B-203ENST00000400772 GPR155Q7Z3F1 870 aa15.62■□□□□ 0.09
ATG4B-203ENST00000400772 JAMLQ86YT9 394 aa15.62■□□□□ 0.09
ATG4B-203ENST00000400772 RASGEF1AQ8N9B8 481 aa15.62■□□□□ 0.09
ATG4B-203ENST00000400772 BRSK1Q8TDC3 778 aa15.62■□□□□ 0.09
ATG4B-203ENST00000400772 DPYSL5Q9BPU6 564 aa15.62■□□□□ 0.09
ATG4B-203ENST00000400772 TIMM29Q9BSF4 260 aa15.62■□□□□ 0.09
ATG4B-203ENST00000400772 OSGEPL1Q9H4B0 414 aa15.62■□□□□ 0.09
ATG4B-203ENST00000400772 FOXJ2Q9P0K8 574 aa15.62■□□□□ 0.09
ATG4B-203ENST00000400772 ZNF624Q9P2J8 865 aaPredicted RBP15.62■□□□□ 0.09
ATG4B-203ENST00000400772 CPNE7Q9UBL6 633 aa15.62■□□□□ 0.09
ATG4B-203ENST00000400772 DNAJC16Q9Y2G8 782 aa15.62■□□□□ 0.09
ATG4B-203ENST00000400772 PKP3Q9Y446 797 aa15.62■□□□□ 0.09
ATG4B-203ENST00000400772 BPTFQ12830 3046 aa15.61■□□□□ 0.09
ATG4B-203ENST00000400772 STX7O15400 261 aaKnown RBP15.61■□□□□ 0.09
ATG4B-203ENST00000400772 EFSO43281 561 aa15.61■□□□□ 0.09
ATG4B-203ENST00000400772 PPFIA2O75334 1257 aa15.61■□□□□ 0.09
ATG4B-203ENST00000400772 STK10O94804 968 aaKnown RBP15.61■□□□□ 0.09
ATG4B-203ENST00000400772 METTL18O95568 372 aa15.61■□□□□ 0.09
ATG4B-203ENST00000400772 FGF3P11487 239 aaPredicted RBP15.61■□□□□ 0.09
ATG4B-203ENST00000400772 SLC2A4P14672 509 aa15.61■□□□□ 0.09
ATG4B-203ENST00000400772 LPOP22079 712 aaPredicted RBP15.61■□□□□ 0.09
ATG4B-203ENST00000400772 SLC19A1P41440 591 aa15.61■□□□□ 0.09
ATG4B-203ENST00000400772 CTSCP53634 463 aa15.61■□□□□ 0.09
ATG4B-203ENST00000400772 MAPK10P53779 464 aa15.61■□□□□ 0.09
ATG4B-203ENST00000400772 GDF10P55107 478 aa15.61■□□□□ 0.09
ATG4B-203ENST00000400772 TMPRSS3P57727 454 aa15.61■□□□□ 0.09
ATG4B-203ENST00000400772 PRPSAP1Q14558 356 aa15.61■□□□□ 0.09
ATG4B-203ENST00000400772 TGIF1Q15583 401 aa15.61■□□□□ 0.09
ATG4B-203ENST00000400772 KCTD11Q693B1 232 aa15.61■□□□□ 0.09
ATG4B-203ENST00000400772 ABRAXAS1Q6UWZ7 409 aa15.61■□□□□ 0.09
ATG4B-203ENST00000400772 FAM71DQ8N9W8 422 aa15.61■□□□□ 0.09
ATG4B-203ENST00000400772 TTC13Q8NBP0 860 aa15.61■□□□□ 0.09
ATG4B-203ENST00000400772 DDHD1Q8NEL9 900 aa15.61■□□□□ 0.09
ATG4B-203ENST00000400772 OR4K2Q8NGD2 314 aa15.61■□□□□ 0.09
ATG4B-203ENST00000400772 OR10G6Q8NH81 332 aa15.61■□□□□ 0.09
ATG4B-203ENST00000400772 GDAP1Q8TB36 358 aa15.61■□□□□ 0.09
ATG4B-203ENST00000400772 SLC35B2Q8TB61 432 aa15.61■□□□□ 0.09
ATG4B-203ENST00000400772 PMEPA1Q969W9 287 aa15.61■□□□□ 0.09
ATG4B-203ENST00000400772 SH3KBP1Q96B97 665 aa15.61■□□□□ 0.09
ATG4B-203ENST00000400772 TBC1D10AQ9BXI6 508 aa15.61■□□□□ 0.09
ATG4B-203ENST00000400772 ARNT2Q9HBZ2 717 aa15.61■□□□□ 0.09
ATG4B-203ENST00000400772 GOLGA6L9A6NEM1 432 aa15.6■□□□□ 0.09
ATG4B-203ENST00000400772 RPL10P27635 214 aaKnown RBP15.6■□□□□ 0.09
ATG4B-203ENST00000400772 ARSDP51689 593 aa15.6■□□□□ 0.09
ATG4B-203ENST00000400772 UCNP55089 124 aa15.6■□□□□ 0.09
ATG4B-203ENST00000400772 XIAPP98170 497 aa15.6■□□□□ 0.09
ATG4B-203ENST00000400772 ITGA9Q13797 1035 aa15.6■□□□□ 0.09
ATG4B-203ENST00000400772 CLCA4Q14CN2 919 aa15.6■□□□□ 0.09
ATG4B-203ENST00000400772 SEPT7Q16181 437 aaKnown RBP15.6■□□□□ 0.09
ATG4B-203ENST00000400772 PARP6Q2NL67 630 aa15.6■□□□□ 0.09
ATG4B-203ENST00000400772 LDLRAP1Q5SW96 308 aa15.6■□□□□ 0.09
ATG4B-203ENST00000400772 GPRC6AQ5T6X5 926 aa15.6■□□□□ 0.09
ATG4B-203ENST00000400772 ARHGAP40Q5TG30 622 aa15.6■□□□□ 0.09
ATG4B-203ENST00000400772 WDR74Q6RFH5 385 aaPredicted RBP15.6■□□□□ 0.09
ATG4B-203ENST00000400772 WASH2PQ6VEQ5 465 aa15.6■□□□□ 0.09
ATG4B-203ENST00000400772 TRAPPC5Q8IUR0 188 aa15.6■□□□□ 0.09
ATG4B-203ENST00000400772 ZNF398Q8TD17 642 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms