RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 UGT1A7Q9HAW7 530 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 UGT1A10Q9HAW8 530 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 UGT1A8Q9HAW9 530 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 MRM3Q9HC36 420 aaKnown RBP25.16■■□□□ 1.62
U2AF1-203ENST00000398137 ARFGAP3Q9NP61 516 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 DMGDHQ9UI17 866 aaKnown RBP25.16■■□□□ 1.62
U2AF1-203ENST00000398137 TMPRSS11EQ9UL52 423 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 RIMKLBQ9ULI2 386 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 LHX6Q9UPM6 363 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 CLCA2Q9UQC9 943 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 TMEM202A6NGA9 273 aa25.15■■□□□ 1.62
U2AF1-203ENST00000398137 H3BM21 787 aa25.15■■□□□ 1.62
U2AF1-203ENST00000398137 ALPPL2P10696 532 aa25.15■■□□□ 1.62
U2AF1-203ENST00000398137 CA5AP35218 305 aa25.15■■□□□ 1.62
U2AF1-203ENST00000398137 ARL4CP56559 192 aa25.15■■□□□ 1.62
U2AF1-203ENST00000398137 E2F1Q01094 437 aa25.15■■□□□ 1.62
U2AF1-203ENST00000398137 DHX9Q08211 1270 aaKnown RBP25.15■■□□□ 1.62
U2AF1-203ENST00000398137 C1orf61Q13536 156 aa25.15■■□□□ 1.62
U2AF1-203ENST00000398137 RTP5Q14D33 572 aa25.15■■□□□ 1.62
U2AF1-203ENST00000398137 GLE1Q53GS7 698 aaKnown RBP25.15■■□□□ 1.62
U2AF1-203ENST00000398137 ENPP7Q6UWV6 458 aa25.15■■□□□ 1.62
U2AF1-203ENST00000398137 PHACTR4Q8IZ21 702 aa25.15■■□□□ 1.62
U2AF1-203ENST00000398137 PDIK1LQ8N165 341 aa25.15■■□□□ 1.62
U2AF1-203ENST00000398137 DTX3LQ8TDB6 740 aa25.15■■□□□ 1.62
U2AF1-203ENST00000398137 HDAC10Q969S8 669 aa25.15■■□□□ 1.62
U2AF1-203ENST00000398137 COX14Q96I36 57 aa25.15■■□□□ 1.62
U2AF1-203ENST00000398137 SIGLEC10Q96LC7 697 aa25.15■■□□□ 1.62
U2AF1-203ENST00000398137 DUSP23Q9BVJ7 150 aa25.15■■□□□ 1.62
U2AF1-203ENST00000398137 FGF22Q9HCT0 170 aa25.15■■□□□ 1.62
U2AF1-203ENST00000398137 KLQ9UEF7 1012 aa25.15■■□□□ 1.62
U2AF1-203ENST00000398137 OAS3Q9Y6K5 1087 aaKnown RBP25.15■■□□□ 1.62
U2AF1-203ENST00000398137 LOC400499M0QZD8 3231 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 CCDC162PA2VCL2 907 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 OR51F1A6NGY5 319 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 H7C0S8 307 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 OPA1O60313 960 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 MT-CO3P00414 261 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 CELA2BP08218 269 aaPredicted RBP25.14■■□□□ 1.62
U2AF1-203ENST00000398137 ITGALP20701 1170 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 KELP23276 732 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 PLTPP55058 493 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 ACVR1Q04771 509 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 NFATC2Q13469 925 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 ITGA9Q13797 1035 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 ZNF648Q5T619 568 aaPredicted RBP25.14■■□□□ 1.62
U2AF1-203ENST00000398137 ZCCHC8Q6NZY4 707 aaKnown RBP25.14■■□□□ 1.62
U2AF1-203ENST00000398137 PHYKPLQ8IUZ5 450 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 OR56A4Q8NGH8 313 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 ZNF398Q8TD17 642 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 BTN2A2Q8WVV5 523 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 PEX13Q92968 403 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 NXPE2Q96DL1 559 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 STAMBPL1Q96FJ0 436 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 PDXPQ96GD0 296 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 VPS35Q96QK1 796 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 NRSN2Q9GZP1 204 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 FAM96AQ9H5X1 160 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 ASB8Q9H765 288 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 EPB41L5Q9HCM4 733 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 TREX1Q9NSU2 369 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 APOBEC3BQ9UH17 382 aaKnown RBP25.14■■□□□ 1.62
U2AF1-203ENST00000398137 TMEM98Q9Y2Y6 226 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 SLC30A1Q9Y6M5 507 aa25.14■■□□□ 1.62
U2AF1-203ENST00000398137 RP1P56715 2156 aa25.13■■□□□ 1.61
U2AF1-203ENST00000398137 CASC3O15234 703 aaKnown RBP25.13■■□□□ 1.61
U2AF1-203ENST00000398137 TLX3O43711 291 aaPredicted RBP25.13■■□□□ 1.61
U2AF1-203ENST00000398137 SLC25A14O95258 325 aaPredicted RBP25.13■■□□□ 1.61
U2AF1-203ENST00000398137 PRAMEP78395 509 aa25.13■■□□□ 1.61
U2AF1-203ENST00000398137 ALG11Q2TAA5 492 aa25.13■■□□□ 1.61
U2AF1-203ENST00000398137 COL28A1Q2UY09 1125 aa25.13■■□□□ 1.61
U2AF1-203ENST00000398137 PRRT3Q5FWE3 981 aa25.13■■□□□ 1.61
U2AF1-203ENST00000398137 ZRANB3Q5FWF4 1079 aa25.13■■□□□ 1.61
U2AF1-203ENST00000398137 GUSBP11Q6P575 273 aa25.13■■□□□ 1.61
U2AF1-203ENST00000398137 AFTPHQ6ULP2 937 aa25.13■■□□□ 1.61
U2AF1-203ENST00000398137 ZDHHC24Q6UX98 284 aa25.13■■□□□ 1.61
U2AF1-203ENST00000398137 GDAP1Q8TB36 358 aa25.13■■□□□ 1.61
U2AF1-203ENST00000398137 OR1E3Q8WZA6 343 aa25.13■■□□□ 1.61
U2AF1-203ENST00000398137 SEC14L1Q92503 715 aa25.13■■□□□ 1.61
U2AF1-203ENST00000398137 ART4Q93070 314 aa25.13■■□□□ 1.61
U2AF1-203ENST00000398137 TSACCQ96A04 125 aaPredicted RBP25.13■■□□□ 1.61
U2AF1-203ENST00000398137 ZNF669Q96BR6 464 aaPredicted RBP25.13■■□□□ 1.61
U2AF1-203ENST00000398137 MFSD3Q96ES6 412 aa25.13■■□□□ 1.61
U2AF1-203ENST00000398137 BOCQ9BWV1 1114 aa25.13■■□□□ 1.61
U2AF1-203ENST00000398137 SMOXQ9NWM0 555 aa25.13■■□□□ 1.61
U2AF1-203ENST00000398137 MOSPD1Q9UJG1 213 aa25.13■■□□□ 1.61
U2AF1-203ENST00000398137 PCDHB1Q9Y5F3 818 aa25.13■■□□□ 1.61
U2AF1-203ENST00000398137 FAM237BA0A1B0GVD1 139 aa25.12■■□□□ 1.61
U2AF1-203ENST00000398137 TPP1O14773 563 aa25.12■■□□□ 1.61
U2AF1-203ENST00000398137 MTX2O75431 263 aa25.12■■□□□ 1.61
U2AF1-203ENST00000398137 ASMTLO95671 621 aa25.12■■□□□ 1.61
U2AF1-203ENST00000398137 GOT2P00505 430 aaKnown RBP25.12■■□□□ 1.61
U2AF1-203ENST00000398137 GP1BAP07359 652 aa25.12■■□□□ 1.61
U2AF1-203ENST00000398137 RHOXF2BP0C7M4 288 aa25.12■■□□□ 1.61
U2AF1-203ENST00000398137 PRSS56P0CW18 603 aa25.12■■□□□ 1.61
U2AF1-203ENST00000398137 POLD2P49005 469 aa25.12■■□□□ 1.61
U2AF1-203ENST00000398137 DRG2P55039 364 aaKnown RBP25.12■■□□□ 1.61
U2AF1-203ENST00000398137 SRP54P61011 504 aaKnown RBP25.12■■□□□ 1.61
U2AF1-203ENST00000398137 KHDC1Q4VXA5 237 aaKnown RBP25.12■■□□□ 1.61
U2AF1-203ENST00000398137 HP1BP3Q5SSJ5 553 aaPredicted RBP25.12■■□□□ 1.61
U2AF1-203ENST00000398137 TEX35Q5T0J7 233 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms