RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 GPR78Q96P69 363 aa27.19■■□□□ 1.94
CPNE1-203ENST00000397442 HHIPQ96QV1 700 aa27.19■■□□□ 1.94
CPNE1-203ENST00000397442 INPP4BO15327 924 aa27.18■■□□□ 1.94
CPNE1-203ENST00000397442 ZNF37AP17032 561 aaPredicted RBP27.18■■□□□ 1.94
CPNE1-203ENST00000397442 CLCN7P51798 805 aa27.18■■□□□ 1.94
CPNE1-203ENST00000397442 MAP7D1Q3KQU3 841 aa27.18■■□□□ 1.94
CPNE1-203ENST00000397442 LDLRAP1Q5SW96 308 aa27.18■■□□□ 1.94
CPNE1-203ENST00000397442 ZNF648Q5T619 568 aaPredicted RBP27.18■■□□□ 1.94
CPNE1-203ENST00000397442 PTRHD1Q6GMV3 140 aaKnown RBP27.18■■□□□ 1.94
CPNE1-203ENST00000397442 CCDC91Q7Z6B0 441 aa27.18■■□□□ 1.94
CPNE1-203ENST00000397442 LCA5Q86VQ0 697 aa27.18■■□□□ 1.94
CPNE1-203ENST00000397442 SPATA6LQ8N4H0 392 aa27.18■■□□□ 1.94
CPNE1-203ENST00000397442 CD200R1Q8TD46 325 aa27.18■■□□□ 1.94
CPNE1-203ENST00000397442 KLK6Q92876 244 aa27.18■■□□□ 1.94
CPNE1-203ENST00000397442 CENPTQ96BT3 561 aa27.18■■□□□ 1.94
CPNE1-203ENST00000397442 IGSF5Q9NSI5 407 aa27.18■■□□□ 1.94
CPNE1-203ENST00000397442 VCANP13611 3396 aa27.18■■□□□ 1.94
CPNE1-203ENST00000397442 C10orf142B7Z368 130 aa27.17■■□□□ 1.94
CPNE1-203ENST00000397442 SGTAO43765 313 aa27.17■■□□□ 1.94
CPNE1-203ENST00000397442 VPS26AO75436 327 aa27.17■■□□□ 1.94
CPNE1-203ENST00000397442 KLHL2O95198 593 aa27.17■■□□□ 1.94
CPNE1-203ENST00000397442 SLC25A14O95258 325 aaPredicted RBP27.17■■□□□ 1.94
CPNE1-203ENST00000397442 PAK4O96013 591 aaPredicted RBP27.17■■□□□ 1.94
CPNE1-203ENST00000397442 RPS9P46781 194 aaKnown RBP27.17■■□□□ 1.94
CPNE1-203ENST00000397442 PNCKQ6P2M8 343 aa27.17■■□□□ 1.94
CPNE1-203ENST00000397442 KYAT3Q6YP21 454 aaKnown RBP27.17■■□□□ 1.94
CPNE1-203ENST00000397442 PGBD3Q8N328 593 aa27.17■■□□□ 1.94
CPNE1-203ENST00000397442 TP53I13Q8NBR0 393 aaPredicted RBP27.17■■□□□ 1.94
CPNE1-203ENST00000397442 NXNL1Q96CM4 212 aa27.17■■□□□ 1.94
CPNE1-203ENST00000397442 SLC17A9Q9BYT1 436 aa27.17■■□□□ 1.94
CPNE1-203ENST00000397442 MBNL1Q9NR56 388 aaKnown RBP27.17■■□□□ 1.94
CPNE1-203ENST00000397442 H3BMM5 538 aa27.17■■□□□ 1.94
CPNE1-203ENST00000397442 STK25O00506 426 aa27.17■■□□□ 1.94
CPNE1-203ENST00000397442 PLIN3O60664 434 aa27.17■■□□□ 1.94
CPNE1-203ENST00000397442 CCDC166P0CW27 439 aa27.17■■□□□ 1.94
CPNE1-203ENST00000397442 ATP1B2P14415 290 aaPredicted RBP27.17■■□□□ 1.94
CPNE1-203ENST00000397442 CHRM3P20309 590 aa27.17■■□□□ 1.94
CPNE1-203ENST00000397442 AKT1P31749 480 aa27.17■■□□□ 1.94
CPNE1-203ENST00000397442 SLC26A3P40879 764 aa27.17■■□□□ 1.94
CPNE1-203ENST00000397442 PDAP1Q13442 181 aaKnown RBP27.17■■□□□ 1.94
CPNE1-203ENST00000397442 PAQR3Q6TCH7 311 aa27.17■■□□□ 1.94
CPNE1-203ENST00000397442 TBC1D1Q86TI0 1168 aaPredicted RBP27.17■■□□□ 1.94
CPNE1-203ENST00000397442 SPEM1Q8N4L4 309 aa27.17■■□□□ 1.94
CPNE1-203ENST00000397442 SIDT2Q8NBJ9 832 aaKnown RBP27.17■■□□□ 1.94
CPNE1-203ENST00000397442 CAPS2Q9BXY5 557 aa27.17■■□□□ 1.94
CPNE1-203ENST00000397442 BTBD1Q9H0C5 482 aa27.17■■□□□ 1.94
CPNE1-203ENST00000397442 PROCP04070 461 aa27.16■■□□□ 1.94
CPNE1-203ENST00000397442 CSHL1Q14406 222 aa27.16■■□□□ 1.94
CPNE1-203ENST00000397442 ADAMTSL4Q6UY14 1074 aa27.16■■□□□ 1.94
CPNE1-203ENST00000397442 PHYKPLQ8IUZ5 450 aa27.16■■□□□ 1.94
CPNE1-203ENST00000397442 ARMC2Q8NEN0 867 aa27.16■■□□□ 1.94
CPNE1-203ENST00000397442 DCUN1D1Q96GG9 259 aa27.16■■□□□ 1.94
CPNE1-203ENST00000397442 RUVBL2Q9Y230 463 aaKnown RBP27.16■■□□□ 1.94
CPNE1-203ENST00000397442 SIT1Q9Y3P8 196 aa27.16■■□□□ 1.94
CPNE1-203ENST00000397442 E5RI56 91 aa27.15■■□□□ 1.94
CPNE1-203ENST00000397442 PYGLP06737 847 aa27.15■■□□□ 1.94
CPNE1-203ENST00000397442 SKIV2L2P42285 1042 aaKnown RBP27.15■■□□□ 1.94
CPNE1-203ENST00000397442 SGCGQ13326 291 aa27.15■■□□□ 1.94
CPNE1-203ENST00000397442 IRF4Q15306 451 aa27.15■■□□□ 1.94
CPNE1-203ENST00000397442 DET1Q7L5Y6 550 aa27.15■■□□□ 1.94
CPNE1-203ENST00000397442 TRIM74Q86UV6 250 aa27.15■■□□□ 1.94
CPNE1-203ENST00000397442 TMEM151AQ8N4L1 468 aa27.15■■□□□ 1.94
CPNE1-203ENST00000397442 OR2T34Q8NGX1 318 aa27.15■■□□□ 1.94
CPNE1-203ENST00000397442 HEXDCQ8WVB3 486 aa27.15■■□□□ 1.94
CPNE1-203ENST00000397442 SGF29Q96ES7 293 aa27.15■■□□□ 1.94
CPNE1-203ENST00000397442 LENG8Q96PV6 779 aaPredicted RBP27.15■■□□□ 1.94
CPNE1-203ENST00000397442 UNKQ9C0B0 810 aaKnown RBP27.15■■□□□ 1.94
CPNE1-203ENST00000397442 SGK2Q9HBY8 427 aa27.15■■□□□ 1.94
CPNE1-203ENST00000397442 DHRS7Q9Y394 339 aa27.15■■□□□ 1.94
CPNE1-203ENST00000397442 CFAP99D6REC4 459 aa27.14■■□□□ 1.94
CPNE1-203ENST00000397442 RAD51BO15315 384 aa27.14■■□□□ 1.94
CPNE1-203ENST00000397442 PCCBP05166 539 aa27.14■■□□□ 1.94
CPNE1-203ENST00000397442 LTA4HP09960 611 aaKnown RBP27.14■■□□□ 1.94
CPNE1-203ENST00000397442 MSH3P20585 1137 aa27.14■■□□□ 1.94
CPNE1-203ENST00000397442 MAT2AP31153 395 aaKnown RBP27.14■■□□□ 1.94
CPNE1-203ENST00000397442 MTAPQ13126 283 aa27.14■■□□□ 1.94
CPNE1-203ENST00000397442 SEPT7Q16181 437 aaKnown RBP27.14■■□□□ 1.94
CPNE1-203ENST00000397442 HHATQ5VTY9 493 aa27.14■■□□□ 1.94
CPNE1-203ENST00000397442 TRIM69Q86WT6 500 aa27.14■■□□□ 1.94
CPNE1-203ENST00000397442 RASGEF1AQ8N9B8 481 aa27.14■■□□□ 1.94
CPNE1-203ENST00000397442 ASB12Q8WXK4 309 aa27.14■■□□□ 1.94
CPNE1-203ENST00000397442 COX14Q96I36 57 aa27.14■■□□□ 1.94
CPNE1-203ENST00000397442 PAIP2Q9BPZ3 127 aaKnown RBP27.14■■□□□ 1.94
CPNE1-203ENST00000397442 TRMT6Q9UJA5 497 aaKnown RBP27.14■■□□□ 1.94
CPNE1-203ENST00000397442 RALBP11234 206 aa27.14■■□□□ 1.93
CPNE1-203ENST00000397442 ITGB6P18564 788 aa27.14■■□□□ 1.93
CPNE1-203ENST00000397442 TMEM115Q12893 351 aaPredicted RBP27.14■■□□□ 1.93
CPNE1-203ENST00000397442 FUBP1Q96AE4 644 aaKnown RBP27.14■■□□□ 1.93
CPNE1-203ENST00000397442 NMRAL1Q9HBL8 299 aa27.14■■□□□ 1.93
CPNE1-203ENST00000397442 SYTL2Q9HCH5 934 aa27.14■■□□□ 1.93
CPNE1-203ENST00000397442 SARS2Q9NP81 518 aaKnown RBP27.14■■□□□ 1.93
CPNE1-203ENST00000397442 LATS2Q9NRM7 1088 aa27.14■■□□□ 1.93
CPNE1-203ENST00000397442 SHOX2O60902 331 aaPredicted RBP27.13■■□□□ 1.93
CPNE1-203ENST00000397442 AP2A2O94973 939 aa27.13■■□□□ 1.93
CPNE1-203ENST00000397442 TRIM16O95361 564 aa27.13■■□□□ 1.93
CPNE1-203ENST00000397442 TSPAN12O95859 305 aa27.13■■□□□ 1.93
CPNE1-203ENST00000397442 DCNP07585 359 aaKnown RBP27.13■■□□□ 1.93
CPNE1-203ENST00000397442 SBK3P0C264 359 aa27.13■■□□□ 1.93
CPNE1-203ENST00000397442 OR56A5P0C7T3 313 aa27.13■■□□□ 1.93
CPNE1-203ENST00000397442 TEAD1P28347 426 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms