RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 PCDHGA1Q9Y5H4 931 aa20.91■□□□□ 0.94
TSPAN4-206ENST00000397408 TRBV5-4A0A0C4DH59 114 aa20.9■□□□□ 0.94
TSPAN4-206ENST00000397408 CPED1A4D0V7 1026 aa20.9■□□□□ 0.94
TSPAN4-206ENST00000397408 KIF2AO00139 706 aaPredicted RBP20.9■□□□□ 0.94
TSPAN4-206ENST00000397408 KMOO15229 486 aa20.9■□□□□ 0.94
TSPAN4-206ENST00000397408 DKK1O94907 266 aa20.9■□□□□ 0.94
TSPAN4-206ENST00000397408 MLNP12872 115 aa20.9■□□□□ 0.94
TSPAN4-206ENST00000397408 CTSCP53634 463 aa20.9■□□□□ 0.94
TSPAN4-206ENST00000397408 PRAMEP78395 509 aa20.9■□□□□ 0.94
TSPAN4-206ENST00000397408 FOXC1Q12948 553 aa20.9■□□□□ 0.94
TSPAN4-206ENST00000397408 INSCQ1MX18 579 aa20.9■□□□□ 0.94
TSPAN4-206ENST00000397408 DET1Q7L5Y6 550 aa20.9■□□□□ 0.94
TSPAN4-206ENST00000397408 PIANPQ8IYJ0 282 aa20.9■□□□□ 0.94
TSPAN4-206ENST00000397408 MPP5Q8N3R9 675 aa20.9■□□□□ 0.94
TSPAN4-206ENST00000397408 ZDHHC1Q8WTX9 485 aa20.9■□□□□ 0.94
TSPAN4-206ENST00000397408 CCDC97Q96F63 343 aaPredicted RBP20.9■□□□□ 0.94
TSPAN4-206ENST00000397408 DCUN1D1Q96GG9 259 aa20.9■□□□□ 0.94
TSPAN4-206ENST00000397408 COPS8Q99627 209 aa20.9■□□□□ 0.94
TSPAN4-206ENST00000397408 CDC23Q9UJX2 597 aa20.9■□□□□ 0.94
TSPAN4-206ENST00000397408 PADI4Q9UM07 663 aa20.9■□□□□ 0.94
TSPAN4-206ENST00000397408 OR2AG2A6NM03 316 aa20.89■□□□□ 0.94
TSPAN4-206ENST00000397408 NOBOXO60393 691 aa20.89■□□□□ 0.94
TSPAN4-206ENST00000397408 GOT2P00505 430 aaKnown RBP20.89■□□□□ 0.94
TSPAN4-206ENST00000397408 ACRV1P26436 265 aa20.89■□□□□ 0.94
TSPAN4-206ENST00000397408 FOXN2P32314 431 aa20.89■□□□□ 0.94
TSPAN4-206ENST00000397408 CKAP4Q07065 602 aaKnown RBP20.89■□□□□ 0.94
TSPAN4-206ENST00000397408 CASC4Q6P4E1 433 aa20.89■□□□□ 0.94
TSPAN4-206ENST00000397408 OGFOD3Q6PK18 319 aa20.89■□□□□ 0.94
TSPAN4-206ENST00000397408 EFL1Q7Z2Z2 1120 aaKnown RBP20.89■□□□□ 0.94
TSPAN4-206ENST00000397408 PCGF5Q86SE9 256 aa20.89■□□□□ 0.94
TSPAN4-206ENST00000397408 SERPINA9Q86WD7 417 aa20.89■□□□□ 0.94
TSPAN4-206ENST00000397408 GPR156Q8NFN8 814 aa20.89■□□□□ 0.94
TSPAN4-206ENST00000397408 OR6P1Q8NGX9 317 aa20.89■□□□□ 0.94
TSPAN4-206ENST00000397408 IFI44Q8TCB0 444 aa20.89■□□□□ 0.94
TSPAN4-206ENST00000397408 NAT14Q8WUY8 206 aa20.89■□□□□ 0.94
TSPAN4-206ENST00000397408 TIMM29Q9BSF4 260 aa20.89■□□□□ 0.94
TSPAN4-206ENST00000397408 KIFC1Q9BW19 673 aa20.89■□□□□ 0.94
TSPAN4-206ENST00000397408 OSGEPL1Q9H4B0 414 aa20.89■□□□□ 0.94
TSPAN4-206ENST00000397408 MRM3Q9HC36 420 aaKnown RBP20.89■□□□□ 0.94
TSPAN4-206ENST00000397408 KLC4Q9NSK0 619 aa20.89■□□□□ 0.94
TSPAN4-206ENST00000397408 TREX1Q9NSU2 369 aa20.89■□□□□ 0.94
TSPAN4-206ENST00000397408 SLC23A2Q9UGH3 650 aa20.89■□□□□ 0.94
TSPAN4-206ENST00000397408 SOX13Q9UN79 622 aa20.89■□□□□ 0.94
TSPAN4-206ENST00000397408 EME2A4GXA9 379 aaPredicted RBP20.88■□□□□ 0.93
TSPAN4-206ENST00000397408 CFAP99D6REC4 459 aa20.88■□□□□ 0.93
TSPAN4-206ENST00000397408 TRIM16O95361 564 aa20.88■□□□□ 0.93
TSPAN4-206ENST00000397408 TUBB4AP04350 444 aa20.88■□□□□ 0.93
TSPAN4-206ENST00000397408 RALBP11234 206 aa20.88■□□□□ 0.93
TSPAN4-206ENST00000397408 ZNF7P17097 686 aaPredicted RBP20.88■□□□□ 0.93
TSPAN4-206ENST00000397408 IVDP26440 423 aa20.88■□□□□ 0.93
TSPAN4-206ENST00000397408 NMBRP28336 390 aa20.88■□□□□ 0.93
TSPAN4-206ENST00000397408 MRPS25P82663 173 aaKnown RBP20.88■□□□□ 0.93
TSPAN4-206ENST00000397408 B4GALNT1Q00973 533 aa20.88■□□□□ 0.93
TSPAN4-206ENST00000397408 ILKQ13418 452 aa20.88■□□□□ 0.93
TSPAN4-206ENST00000397408 DBN1Q16643 649 aa20.88■□□□□ 0.93
TSPAN4-206ENST00000397408 C14orf28Q4W4Y0 310 aa20.88■□□□□ 0.93
TSPAN4-206ENST00000397408 TMEM220Q6QAJ8 160 aa20.88■□□□□ 0.93
TSPAN4-206ENST00000397408 DHRS13Q6UX07 377 aa20.88■□□□□ 0.93
TSPAN4-206ENST00000397408 ZNF572Q7Z3I7 529 aaPredicted RBP20.88■□□□□ 0.93
TSPAN4-206ENST00000397408 HOOK3Q86VS8 718 aa20.88■□□□□ 0.93
TSPAN4-206ENST00000397408 ADAMTS14Q8WXS8 1223 aa20.88■□□□□ 0.93
TSPAN4-206ENST00000397408 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.88■□□□□ 0.933e-8■■■■□ 21.6
TSPAN4-206ENST00000397408 TRIM31Q9BZY9 425 aa20.88■□□□□ 0.93
TSPAN4-206ENST00000397408 ZDHHC3Q9NYG2 299 aa20.88■□□□□ 0.93
TSPAN4-206ENST00000397408 SAMD15Q9P1V8 674 aa20.88■□□□□ 0.93
TSPAN4-206ENST00000397408 DNAJC16Q9Y2G8 782 aa20.88■□□□□ 0.93
TSPAN4-206ENST00000397408 ASXL3Q9C0F0 2248 aa20.88■□□□□ 0.93
TSPAN4-206ENST00000397408 MAGEA3P43357 314 aa20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 MAZP56270 477 aaKnown RBP20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 FNBP1LQ5T0N5 605 aa20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 CES3Q6UWW8 571 aa20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 C11orf96Q7Z7L8 435 aa20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 HEXDCQ8WVB3 486 aa20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 PATE1Q8WXA2 126 aa20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 NAT6Q93015 286 aa20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 MFSD3Q96ES6 412 aa20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 SGF29Q96ES7 293 aa20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 TBC1D29Q9UFV1 150 aa20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 IGLV3-16A0A075B6K0 115 aa20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 SDR42E2A6NKP2 422 aa20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 EFCAB8A8MWE9 144 aa20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 SNX2O60749 519 aa20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 EML2O95834 649 aa20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 GP1BAP07359 652 aa20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 PMLP29590 882 aa20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 HLTFQ14527 1009 aaKnown RBP eCLIP20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 PERM1Q5SV97 790 aa20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 RAB44Q7Z6P3 723 aaPredicted RBP20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 NAGSQ8N159 534 aa20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 CHCHD4Q8N4Q1 142 aa20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 BEND7Q8N7W2 519 aaPredicted RBP20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 OR4L1Q8NH43 312 aa20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 ZNF514Q96K75 400 aaPredicted RBP20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 TRIM56Q9BRZ2 755 aaKnown RBP20.87■□□□□ 0.93
TSPAN4-206ENST00000397408 RP1P56715 2156 aa20.86■□□□□ 0.93
TSPAN4-206ENST00000397408 FAM187AA6NFU0 413 aa20.86■□□□□ 0.93
TSPAN4-206ENST00000397408 RAD51CO43502 376 aa20.86■□□□□ 0.93
TSPAN4-206ENST00000397408 HYAL3O43820 417 aaPredicted RBP20.86■□□□□ 0.93
TSPAN4-206ENST00000397408 POP7O75817 140 aaKnown RBP20.86■□□□□ 0.93
TSPAN4-206ENST00000397408 TOP3BO95985 862 aaKnown RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms