RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 CRLS1Q9UJA2 301 aa17.54■□□□□ 0.4
TNFSF13-204ENST00000396542 PADI4Q9UM07 663 aa17.54■□□□□ 0.4
TNFSF13-204ENST00000396542 COL27A1Q8IZC6 1860 aaPredicted RBP17.54■□□□□ 0.4
TNFSF13-204ENST00000396542 CCDC162PA2VCL2 907 aa17.53■□□□□ 0.4
TNFSF13-204ENST00000396542 DNALI1O14645 258 aaPredicted RBP17.53■□□□□ 0.4
TNFSF13-204ENST00000396542 AVILO75366 819 aa17.53■□□□□ 0.4
TNFSF13-204ENST00000396542 PRSS56P0CW18 603 aa17.53■□□□□ 0.4
TNFSF13-204ENST00000396542 FOXN2P32314 431 aa17.53■□□□□ 0.4
TNFSF13-204ENST00000396542 CDKN1CP49918 316 aaPredicted RBP17.53■□□□□ 0.4
TNFSF13-204ENST00000396542 CTSCP53634 463 aa17.53■□□□□ 0.4
TNFSF13-204ENST00000396542 B4GALNT1Q00973 533 aa17.53■□□□□ 0.4
TNFSF13-204ENST00000396542 GTF2H3Q13889 308 aa17.53■□□□□ 0.4
TNFSF13-204ENST00000396542 HLTFQ14527 1009 aaKnown RBP eCLIP17.53■□□□□ 0.4
TNFSF13-204ENST00000396542 C14orf28Q4W4Y0 310 aa17.53■□□□□ 0.4
TNFSF13-204ENST00000396542 ZRANB3Q5FWF4 1079 aa17.53■□□□□ 0.4
TNFSF13-204ENST00000396542 CRTC3Q6UUV7 619 aa17.53■□□□□ 0.4
TNFSF13-204ENST00000396542 ZNF572Q7Z3I7 529 aaPredicted RBP17.53■□□□□ 0.4
TNFSF13-204ENST00000396542 PIANPQ8IYJ0 282 aa17.53■□□□□ 0.4
TNFSF13-204ENST00000396542 IFI44Q8TCB0 444 aa17.53■□□□□ 0.4
TNFSF13-204ENST00000396542 ZDHHC1Q8WTX9 485 aa17.53■□□□□ 0.4
TNFSF13-204ENST00000396542 NAT6Q93015 286 aa17.53■□□□□ 0.4
TNFSF13-204ENST00000396542 HDAC10Q969S8 669 aa17.53■□□□□ 0.4
TNFSF13-204ENST00000396542 ZNF514Q96K75 400 aaPredicted RBP17.53■□□□□ 0.4
TNFSF13-204ENST00000396542 TTC25Q96NG3 672 aa17.53■□□□□ 0.4
TNFSF13-204ENST00000396542 SERPINB12Q96P63 405 aa17.53■□□□□ 0.4
TNFSF13-204ENST00000396542 SYBUQ9NX95 663 aa17.53■□□□□ 0.4
TNFSF13-204ENST00000396542 GULP1Q9UBP9 304 aa17.53■□□□□ 0.4
TNFSF13-204ENST00000396542 SLC23A2Q9UGH3 650 aa17.53■□□□□ 0.4
TNFSF13-204ENST00000396542 A6NCN8 305 aa17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 OR51F1A6NGY5 319 aa17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 B4DGG1 531 aa17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 TTI1O43156 1089 aa17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 SGTAO43765 313 aa17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 TUBB4AP04350 444 aa17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 ZNF7P17097 686 aaPredicted RBP17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 MSH3P20585 1137 aa17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 ACRV1P26436 265 aa17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 AKT1P31749 480 aa17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 FOXC1Q12948 553 aa17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 SMAD1Q15797 465 aaKnown RBP17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 AFTPHQ6ULP2 937 aa17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 DHRS13Q6UX07 377 aa17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 EFL1Q7Z2Z2 1120 aaKnown RBP17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 HOOK3Q86VS8 718 aa17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 SERPINA9Q86WD7 417 aa17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 TRAPPC5Q8IUR0 188 aa17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 NAGSQ8N159 534 aa17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 OR6C4Q8NGE1 309 aa17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 HEXDCQ8WVB3 486 aa17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 CCDC97Q96F63 343 aaPredicted RBP17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 KRT12Q99456 494 aa17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 COPS8Q99627 209 aa17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 ZDHHC3Q9NYG2 299 aa17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 TBC1D29Q9UFV1 150 aa17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 SOX13Q9UN79 622 aa17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 KCNK6Q9Y257 313 aa17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 DNMT3AQ9Y6K1 912 aaPredicted RBP17.52■□□□□ 0.4
TNFSF13-204ENST00000396542 ASXL3Q9C0F0 2248 aa17.52■□□□□ 0.39
TNFSF13-204ENST00000396542 CPED1A4D0V7 1026 aa17.51■□□□□ 0.39
TNFSF13-204ENST00000396542 FAM221BA6H8Z2 402 aa17.51■□□□□ 0.39
TNFSF13-204ENST00000396542 GOLGA8MH3BSY2 632 aa17.51■□□□□ 0.39
TNFSF13-204ENST00000396542 KCNJ13O60928 360 aa17.51■□□□□ 0.39
TNFSF13-204ENST00000396542 EML2O95834 649 aa17.51■□□□□ 0.39
TNFSF13-204ENST00000396542 TOP3BO95985 862 aaKnown RBP17.51■□□□□ 0.39
TNFSF13-204ENST00000396542 GOT2P00505 430 aaKnown RBP17.51■□□□□ 0.39
TNFSF13-204ENST00000396542 SHC2P98077 582 aa17.51■□□□□ 0.39
TNFSF13-204ENST00000396542 E2F1Q01094 437 aa17.51■□□□□ 0.39
TNFSF13-204ENST00000396542 INSCQ1MX18 579 aa17.51■□□□□ 0.39
TNFSF13-204ENST00000396542 BCL7AQ4VC05 210 aa17.51■□□□□ 0.39
TNFSF13-204ENST00000396542 CCDC157Q569K6 752 aa17.51■□□□□ 0.39
TNFSF13-204ENST00000396542 PERM1Q5SV97 790 aa17.51■□□□□ 0.39
TNFSF13-204ENST00000396542 PCGF5Q86SE9 256 aa17.51■□□□□ 0.39
TNFSF13-204ENST00000396542 MPP5Q8N3R9 675 aa17.51■□□□□ 0.39
TNFSF13-204ENST00000396542 CHCHD4Q8N4Q1 142 aa17.51■□□□□ 0.39
TNFSF13-204ENST00000396542 TRIM51Q9BSJ1 452 aa17.51■□□□□ 0.39
TNFSF13-204ENST00000396542 KLC4Q9NSK0 619 aa17.51■□□□□ 0.39
TNFSF13-204ENST00000396542 CDC23Q9UJX2 597 aa17.51■□□□□ 0.39
TNFSF13-204ENST00000396542 RP1P56715 2156 aa17.5■□□□□ 0.39
TNFSF13-204ENST00000396542 OR2AG2A6NM03 316 aa17.5■□□□□ 0.39
TNFSF13-204ENST00000396542 KIF2AO00139 706 aaPredicted RBP17.5■□□□□ 0.39
TNFSF13-204ENST00000396542 NUDT21O43809 227 aaKnown RBP17.5■□□□□ 0.39
TNFSF13-204ENST00000396542 HYAL3O43820 417 aaPredicted RBP17.5■□□□□ 0.39
TNFSF13-204ENST00000396542 RALBP11234 206 aa17.5■□□□□ 0.39
TNFSF13-204ENST00000396542 PNLIPP16233 465 aa17.5■□□□□ 0.39
TNFSF13-204ENST00000396542 GLB1P16278 677 aa17.5■□□□□ 0.39
TNFSF13-204ENST00000396542 NMBRP28336 390 aa17.5■□□□□ 0.39
TNFSF13-204ENST00000396542 PRAMEP78395 509 aa17.5■□□□□ 0.39
TNFSF13-204ENST00000396542 DMPKQ09013 629 aa17.5■□□□□ 0.39
TNFSF13-204ENST00000396542 ITIH4Q14624 930 aa17.5■□□□□ 0.39
TNFSF13-204ENST00000396542 DBN1Q16643 649 aa17.5■□□□□ 0.39
TNFSF13-204ENST00000396542 PLA2G4EQ3MJ16 856 aa17.5■□□□□ 0.39
TNFSF13-204ENST00000396542 FNBP1LQ5T0N5 605 aa17.5■□□□□ 0.39
TNFSF13-204ENST00000396542 IZUMO3Q5VZ72 239 aa17.5■□□□□ 0.39
TNFSF13-204ENST00000396542 TMEM220Q6QAJ8 160 aa17.5■□□□□ 0.39
TNFSF13-204ENST00000396542 TAS2R42Q7RTR8 314 aa17.5■□□□□ 0.39
TNFSF13-204ENST00000396542 TMPRSS7Q7RTY8 843 aa17.5■□□□□ 0.39
TNFSF13-204ENST00000396542 ZNF438Q7Z4V0 828 aa17.5■□□□□ 0.39
TNFSF13-204ENST00000396542 AGGF1Q8N302 714 aaeCLIP17.5■□□□□ 0.39
TNFSF13-204ENST00000396542 ARL14Q8N4G2 192 aa17.5■□□□□ 0.39
TNFSF13-204ENST00000396542 OR4L1Q8NH43 312 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms